BLASTX nr result
ID: Coptis24_contig00012602
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00012602
(1603 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284832.1| PREDICTED: WD repeat-containing protein 18 [... 548 e-153
ref|XP_003531886.1| PREDICTED: WD repeat-containing protein 18-l... 525 e-146
ref|XP_002327154.1| predicted protein [Populus trichocarpa] gi|2... 525 e-146
ref|XP_002510201.1| WD-repeat protein, putative [Ricinus communi... 525 e-146
ref|XP_003551778.1| PREDICTED: WD repeat-containing protein 18-l... 519 e-144
>ref|XP_002284832.1| PREDICTED: WD repeat-containing protein 18 [Vitis vinifera]
gi|302142303|emb|CBI19506.3| unnamed protein product
[Vitis vinifera]
Length = 448
Score = 548 bits (1412), Expect = e-153
Identities = 273/442 (61%), Positives = 338/442 (76%), Gaps = 2/442 (0%)
Frame = +2
Query: 26 ELVIASSSVDSGGISCFDLQTGAEQSRFKSCSSPSHGLLSIGGRFLAXXXXXXXXXXXXX 205
E+V+ASS VD+G ISC+DLQ+GAE R +SC+SP HGL+ + RF A
Sbjct: 5 EVVVASSPVDAG-ISCWDLQSGAEHLRHRSCASPPHGLVCVADRFFASSQLRDSSSSSSS 63
Query: 206 --ILYWSWNKLQAEVRSFPAEPISPLVSNREGTYIIGGGSRGDIYYWDVASGRLLNKWHA 379
I YWSW+K Q EV+SFPAEPI PL +NREGTYI GGG GDIY+W+VASGRLL KWHA
Sbjct: 64 GSIFYWSWSKPQVEVKSFPAEPIKPLAANREGTYIAGGGLSGDIYFWEVASGRLLKKWHA 123
Query: 380 HYRAVTCLVLSDDESLLISGSEDGSVRVWSLYKLFNVIEIQKAKQPYEHSFSEHTLRVTD 559
HYRAVTCLV SDDESLLISG+EDG VRVWSL+ +F+ + ++A YEHSFSEHTLRVTD
Sbjct: 124 HYRAVTCLVFSDDESLLISGAEDGCVRVWSLFMIFDDLRREEAGHLYEHSFSEHTLRVTD 183
Query: 560 VVCGSGGCSAIVISASEDRTCKVWGISEGRLLRTVEFPSIIDAIALDPGEKSFFAGSRDG 739
+V G GG +AI++SASEDRTCKVW +S GRLLR V FPSIIDAIALDPGE F+AGSRDG
Sbjct: 184 IVTGYGGGNAIIVSASEDRTCKVWSLSTGRLLRNVVFPSIIDAIALDPGEHVFYAGSRDG 243
Query: 740 KIYIAALDGERTSSSSFGMHIIGALSEHSKAVSCLALNMDGNLLVSGLVDGTIRVWDTKT 919
KIYIAAL+ +SS+S+GMHIIG+LS+HSKAV+CLA DG LLVSG DG +RVWDTKT
Sbjct: 244 KIYIAALNAVGSSSNSYGMHIIGSLSDHSKAVTCLAFATDGILLVSGSEDGMVRVWDTKT 303
Query: 920 LQIVRMLKHSKGPVNNVLVIRRSLSKNPQTAANRQASRRHGSSLPPPLDKYTNSKDDDID 1099
I R+ KH+KGPV+N+LV+RR NP+ ++ +S++HGS L PPLDKY NS D++ D
Sbjct: 304 RNIFRIFKHAKGPVSNILVVRRPNDSNPRN--SQTSSKKHGSFLSPPLDKYLNSSDENED 361
Query: 1100 VNPIISLPSHCTETPDGRLYYTSHVMSSHIKEFQQQGSSAASEMEMARLRLDSKRSLEMT 1279
I + +++ D Y + H++ IKE QQQGSSAA+EMEM RL++DS++S++M
Sbjct: 362 AKVFIGCQTTFSKSVDAS-YRSCHIIIDQIKELQQQGSSAATEMEMERLKIDSQKSVQMV 420
Query: 1280 HQWMKMYEDLHHFCVDELVDGD 1345
QW KMYE+LH FCV+EL+D D
Sbjct: 421 QQWKKMYENLHQFCVNELLDAD 442
>ref|XP_003531886.1| PREDICTED: WD repeat-containing protein 18-like [Glycine max]
Length = 449
Score = 525 bits (1353), Expect = e-146
Identities = 257/447 (57%), Positives = 333/447 (74%), Gaps = 1/447 (0%)
Frame = +2
Query: 23 MELVIASSSVDSGGISCFDLQTGAEQSRFKSCSSPSHGLLSIGGRFLAXXXXXXXXXXXX 202
ME+V+ASSSVD GGI C+DL TGAEQ R+KSC+SPSHGL+S+G RF+A
Sbjct: 1 MEVVLASSSVD-GGIGCWDLHTGAEQLRYKSCTSPSHGLISVGARFIASSQLRDDPAATG 59
Query: 203 XILYWSWNKLQAEVRSFPAEPISPLVSNREGTYIIGGGSRGDIYYWDVASGRLLNKWHAH 382
+LYWSW+K Q EV+SFPAE I P+ +N GTYI GG GDIY W+V +GRLL KW AH
Sbjct: 60 YVLYWSWSKPQVEVKSFPAEQIKPIAANHPGTYIAGGAPSGDIYLWEVETGRLLKKWRAH 119
Query: 383 YRAVTCLVLSDDESLLISGSEDGSVRVWSLYKLFNVIEIQKAKQPYEHSFSEHTLRVTDV 562
+RAV+CLV S+D+SLL+SGSEDGSVRVWSL+ +F+ + Q+A YE+SFSEHTL VTDV
Sbjct: 120 FRAVSCLVFSEDDSLLVSGSEDGSVRVWSLFMIFDDLRCQQASNLYEYSFSEHTLTVTDV 179
Query: 563 VCGSGGCSAIVISASEDRTCKVWGISEGRLLRTVEFPSIIDAIALDPGEKSFFAGSRDGK 742
V G+GGC+AI++SAS DRTCKVW +S G LLR + FPSII+ IALDP E F+AGS DGK
Sbjct: 180 VIGNGGCNAIIVSASNDRTCKVWSLSRGMLLRNIVFPSIINCIALDPAEHVFYAGSEDGK 239
Query: 743 IYIAALDGERTSSSSFGMHIIGALSEHSKAVSCLALNMDGNLLVSGLVDGTIRVWDTKTL 922
I+IAAL+ E +++++GMHIIG+ S HS V+CLA NLL++G DG +RVW+ +T
Sbjct: 240 IFIAALNTESITTNNYGMHIIGSFSNHSNQVTCLAYGTSENLLITGSEDGMVRVWNARTR 299
Query: 923 QIVRMLKHSKGPVNNVLVIRRSLSKNPQTAANRQA-SRRHGSSLPPPLDKYTNSKDDDID 1099
IVRM KH+KGPVNN+LV+RR + ++N QA SR+ GS+LPPPL+KY NS DDD+D
Sbjct: 300 NIVRMFKHAKGPVNNILVVRRENDSSNHISSNVQASSRKQGSNLPPPLEKYANSIDDDLD 359
Query: 1100 VNPIISLPSHCTETPDGRLYYTSHVMSSHIKEFQQQGSSAASEMEMARLRLDSKRSLEMT 1279
+ +ISL Y +SHV+S++IKE Q QGS+AASEMEM +L+ D ++S++M
Sbjct: 360 MKTMISLGGGRRSVDPS--YLSSHVISNYIKELQHQGSAAASEMEMEKLKHDYQKSVQMA 417
Query: 1280 HQWMKMYEDLHHFCVDELVDGDQNKRM 1360
+Q KM E+LH FCV EL+DG Q + +
Sbjct: 418 NQLKKMNENLHQFCVKELLDGGQARTL 444
>ref|XP_002327154.1| predicted protein [Populus trichocarpa] gi|222835469|gb|EEE73904.1|
predicted protein [Populus trichocarpa]
Length = 446
Score = 525 bits (1353), Expect = e-146
Identities = 258/444 (58%), Positives = 334/444 (75%), Gaps = 1/444 (0%)
Frame = +2
Query: 26 ELVIASSSVDSGGISCFDLQTGAEQSRFKSCSSPSHGLLSIGGRFLAXXXXXXXXXXXXX 205
E+VIASSS+D GGI C+DLQTG E R+KSC+SP HGL+S+G RFLA
Sbjct: 3 EIVIASSSID-GGIGCWDLQTGTEHLRYKSCASPPHGLISVGRRFLASSQLQDPKASSGA 61
Query: 206 ILYWSWNKLQAEVRSFPAEPISPLVSNREGTYIIGGGSRGDIYYWDVASGRLLNKWHAHY 385
ILYWSW++ Q EV+ FP EPI PLV+N EGTY++GGG G+IY+W+VA+GRLL KW AHY
Sbjct: 62 ILYWSWSRPQVEVKCFPEEPIKPLVANSEGTYLVGGGLSGNIYFWEVATGRLLKKWRAHY 121
Query: 386 RAVTCLVLSDDESLLISGSEDGSVRVWSLYKLFNVIEIQKAKQPYEHSFSEHTLRVTDVV 565
RAVTCLV ++D+SLL+SGSEDGSVRVW L +F+ ++++A Q YEHSF EHTLRVTD+V
Sbjct: 122 RAVTCLVFTEDDSLLVSGSEDGSVRVWPLLMIFDDYQMEQASQLYEHSFQEHTLRVTDIV 181
Query: 566 CGSGGCSAIVISASEDRTCKVWGISEGRLLRTVEFPSIIDAIALDPGEKSFFAGSRDGKI 745
G GG +AI+ISASEDRTCKVW +S+G LLR + FPSIID+I LDPGE F+AG RDGKI
Sbjct: 182 TGYGGGNAIIISASEDRTCKVWSLSKGILLRNIVFPSIIDSITLDPGEHVFYAGGRDGKI 241
Query: 746 YIAALDGERTSSSSFGMHIIGALSEHSKAVSCLALNMDGNLLVSGLVDGTIRVWDTKTLQ 925
+IAAL + +S S +HIIG+LS HSK V+CLA + +GN+L+SG DG IRVWD KT
Sbjct: 242 HIAALGADSSSIKSHWLHIIGSLSSHSKNVTCLAYSTNGNVLLSGSEDGMIRVWDPKTHN 301
Query: 926 IVRMLKHSKGPVNNVLVIRRSLSKNPQTAANRQA-SRRHGSSLPPPLDKYTNSKDDDIDV 1102
IVR+ KH+KGPVNN+ V+ R NP++ +N QA SRRHG SLPPPL KY N+ D+ + +
Sbjct: 302 IVRVFKHAKGPVNNIHVLNRPAYLNPRSLSNVQASSRRHGLSLPPPLSKYINTMDEKV-I 360
Query: 1103 NPIISLPSHCTETPDGRLYYTSHVMSSHIKEFQQQGSSAASEMEMARLRLDSKRSLEMTH 1282
+ ++L + C D +S V++ IKE QQQGS+AA+EME+ +L+LD +S++M
Sbjct: 361 SAAVNLQATCNNPLDASC-ISSQVINCQIKELQQQGSAAAAEMEVEKLKLDCTQSMQMLQ 419
Query: 1283 QWMKMYEDLHHFCVDELVDGDQNK 1354
+W K Y++LH FCVDEL++GD K
Sbjct: 420 RWKKTYDNLHEFCVDELLEGDNVK 443
>ref|XP_002510201.1| WD-repeat protein, putative [Ricinus communis]
gi|223550902|gb|EEF52388.1| WD-repeat protein, putative
[Ricinus communis]
Length = 452
Score = 525 bits (1352), Expect = e-146
Identities = 256/441 (58%), Positives = 329/441 (74%), Gaps = 1/441 (0%)
Frame = +2
Query: 26 ELVIASSSVDSGGISCFDLQTGAEQSRFKSCSSPSHGLLSIGGRFLAXXXXXXXXXXXXX 205
EL++ASSS+D GGI C+DLQTGAE R+KSC+SP HGL +G RFLA
Sbjct: 4 ELLLASSSID-GGIGCWDLQTGAEHLRYKSCASPPHGLTCVGSRFLAASQLRDSHASSGS 62
Query: 206 ILYWSWNKLQAEVRSFPAEPISPLVSNREGTYIIGGGSRGDIYYWDVASGRLLNKWHAHY 385
I+YWSW+K Q EV+ FP EPI PLV+N+EGTYIIGGG G IY W+VA+GRLL KW AHY
Sbjct: 63 IVYWSWSKPQVEVKCFPEEPIKPLVANKEGTYIIGGGISGHIYIWEVATGRLLKKWRAHY 122
Query: 386 RAVTCLVLSDDESLLISGSEDGSVRVWSLYKLFNVIEIQKAKQPYEHSFSEHTLRVTDVV 565
RAVTCLV ++D+S L+SGSEDGSVRVWSL +F+ + ++A Q YEHSFSEHTLRVTDVV
Sbjct: 123 RAVTCLVFTEDDSFLVSGSEDGSVRVWSLLMMFDEYQTEQASQLYEHSFSEHTLRVTDVV 182
Query: 566 CGSGGCSAIVISASEDRTCKVWGISEGRLLRTVEFPSIIDAIALDPGEKSFFAGSRDGKI 745
G GG + I++SAS+DRTCKVW +S+G LLR + FPSIID++ALDPGE F+AG RDG I
Sbjct: 183 TGYGGGNTIIVSASDDRTCKVWSLSKGNLLRNIVFPSIIDSLALDPGENVFYAGCRDGNI 242
Query: 746 YIAALDGERTSSSSFGMHIIGALSEHSKAVSCLALNMDGNLLVSGLVDGTIRVWDTKTLQ 925
YIAAL+ + +S+ S +HIIG+LS HSK V+CLA + +GNLL++G DG IRVWD ++
Sbjct: 243 YIAALNADSSSTKSHWLHIIGSLSSHSKPVTCLAYSANGNLLLAGSEDGIIRVWDPRSHN 302
Query: 926 IVRMLKHSKGPVNNVLVIRRSLSKNPQTAANRQA-SRRHGSSLPPPLDKYTNSKDDDIDV 1102
IVR KH+KGPVNN+ +++R NP+ ++ QA SRRHGSSLPPPLDKY NS D I
Sbjct: 303 IVRTFKHAKGPVNNIQIVKRPHYLNPRASSIVQASSRRHGSSLPPPLDKYVNSTDKSIGS 362
Query: 1103 NPIISLPSHCTETPDGRLYYTSHVMSSHIKEFQQQGSSAASEMEMARLRLDSKRSLEMTH 1282
++ L C D Y + V+++ IKE QQQGS+AA+EME+ RL+LD + ++M
Sbjct: 363 TAVVRLQDTCNNPLDVS-YVSYQVIANQIKELQQQGSAAAAEMEVERLKLDCAQYMQMLQ 421
Query: 1283 QWMKMYEDLHHFCVDELVDGD 1345
+W KMY++LH CV+EL++GD
Sbjct: 422 KWKKMYDNLHQLCVNELLEGD 442
>ref|XP_003551778.1| PREDICTED: WD repeat-containing protein 18-like [Glycine max]
Length = 449
Score = 519 bits (1336), Expect = e-144
Identities = 256/447 (57%), Positives = 330/447 (73%), Gaps = 1/447 (0%)
Frame = +2
Query: 23 MELVIASSSVDSGGISCFDLQTGAEQSRFKSCSSPSHGLLSIGGRFLAXXXXXXXXXXXX 202
ME+V+ASSSVD GGI C+DL TGAEQ R+KSC+SPSHGL+S+ RF+A
Sbjct: 1 MEVVLASSSVD-GGIGCWDLHTGAEQLRYKSCTSPSHGLVSVAARFIASSQLREDQSAPG 59
Query: 203 XILYWSWNKLQAEVRSFPAEPISPLVSNREGTYIIGGGSRGDIYYWDVASGRLLNKWHAH 382
+L+WSW+K Q EV+SFPAE I PL +N GT+I G GDIY W+V +GRLL KWHAH
Sbjct: 60 SVLFWSWSKPQVEVKSFPAEQIKPLATNHPGTFIAAGAPSGDIYLWEVETGRLLKKWHAH 119
Query: 383 YRAVTCLVLSDDESLLISGSEDGSVRVWSLYKLFNVIEIQKAKQPYEHSFSEHTLRVTDV 562
+RAV+CLV S+D+SLL+SGSEDGSVRVWSL+ +F+ + Q+A YE+SFSEHTL VTDV
Sbjct: 120 FRAVSCLVFSEDDSLLVSGSEDGSVRVWSLFMIFDDLRNQQASSLYEYSFSEHTLTVTDV 179
Query: 563 VCGSGGCSAIVISASEDRTCKVWGISEGRLLRTVEFPSIIDAIALDPGEKSFFAGSRDGK 742
V G+GGC+AI++SAS+DRTCKVW +S G LLR + FPSII+ IALDP E F+AGS DGK
Sbjct: 180 VIGNGGCNAIIVSASKDRTCKVWSLSRGMLLRNIVFPSIINCIALDPAEHVFYAGSEDGK 239
Query: 743 IYIAALDGERTSSSSFGMHIIGALSEHSKAVSCLALNMDGNLLVSGLVDGTIRVWDTKTL 922
I+IAAL+ E +++++GMHII + S HS V+CLA NLL+SG DG +RVW+ +T
Sbjct: 240 IFIAALNTESIATNNYGMHIISSFSNHSNQVTCLAYGSSENLLISGSEDGMVRVWNARTR 299
Query: 923 QIVRMLKHSKGPVNNVLVIRRSLSKNPQTAANRQA-SRRHGSSLPPPLDKYTNSKDDDID 1099
IVRM KHSKGPVNN+LV+RR + ++N QA SR+ GS+LPPPL+KY NS DDD D
Sbjct: 300 NIVRMFKHSKGPVNNILVVRRENDSSNHISSNVQASSRKQGSNLPPPLEKYANSIDDDSD 359
Query: 1100 VNPIISLPSHCTETPDGRLYYTSHVMSSHIKEFQQQGSSAASEMEMARLRLDSKRSLEMT 1279
+ +ISL Y +SHV+S++IKE Q QGS+AASEMEM +L+ D ++S++M
Sbjct: 360 MKTMISLGGGRKSVDPS--YISSHVISNYIKELQHQGSAAASEMEMEKLKHDYQKSVQMA 417
Query: 1280 HQWMKMYEDLHHFCVDELVDGDQNKRM 1360
+Q KM E LH FCV EL+DG Q + +
Sbjct: 418 NQLKKMNEKLHQFCVKELLDGSQARTL 444