BLASTX nr result

ID: Coptis24_contig00012601 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012601
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139298.1| PREDICTED: topless-related protein 4-like [C...   163   1e-38
ref|XP_002527178.1| WD-repeat protein, putative [Ricinus communi...   162   2e-38
ref|XP_003633080.1| PREDICTED: topless-related protein 4-like [V...   162   3e-38
ref|XP_003633079.1| PREDICTED: topless-related protein 4-like [V...   162   3e-38
ref|XP_002285341.2| PREDICTED: topless-related protein 4-like is...   162   3e-38

>ref|XP_004139298.1| PREDICTED: topless-related protein 4-like [Cucumis sativus]
          Length = 1134

 Score =  163 bits (413), Expect = 1e-38
 Identities = 82/85 (96%), Positives = 84/85 (98%)
 Frame = -3

Query: 256 VKDLKVFSAFNDELFKEITQLLTLENFRENEQLSKYGDTKSARSIMLAELKKLIEANPLF 77
           VKDLKVFSAFN+ELFKEITQLLTLENFR+NEQLSKYGDTKSAR IMLAELKKLIEANPLF
Sbjct: 98  VKDLKVFSAFNEELFKEITQLLTLENFRDNEQLSKYGDTKSARGIMLAELKKLIEANPLF 157

Query: 76  RDKLQFPTLKNSRLRTLINQSLNWQ 2
           RDKLQFPTLKNSRLRTLINQSLNWQ
Sbjct: 158 RDKLQFPTLKNSRLRTLINQSLNWQ 182


>ref|XP_002527178.1| WD-repeat protein, putative [Ricinus communis]
           gi|223533443|gb|EEF35191.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 1134

 Score =  162 bits (411), Expect = 2e-38
 Identities = 81/85 (95%), Positives = 85/85 (100%)
 Frame = -3

Query: 256 VKDLKVFSAFNDELFKEITQLLTLENFRENEQLSKYGDTKSARSIMLAELKKLIEANPLF 77
           VKDLKVF+AFN+ELFKEITQLLTLENFR+NEQLSKYGDTKSAR+IMLAELKKLIEANPLF
Sbjct: 98  VKDLKVFAAFNEELFKEITQLLTLENFRDNEQLSKYGDTKSARNIMLAELKKLIEANPLF 157

Query: 76  RDKLQFPTLKNSRLRTLINQSLNWQ 2
           RDKLQFPTLKNSRLRTLINQSLNWQ
Sbjct: 158 RDKLQFPTLKNSRLRTLINQSLNWQ 182


>ref|XP_003633080.1| PREDICTED: topless-related protein 4-like [Vitis vinifera]
          Length = 1123

 Score =  162 bits (409), Expect = 3e-38
 Identities = 81/85 (95%), Positives = 84/85 (98%)
 Frame = -3

Query: 256 VKDLKVFSAFNDELFKEITQLLTLENFRENEQLSKYGDTKSARSIMLAELKKLIEANPLF 77
           VKDLKVFSAFN+ELFKEITQLLTLENFR+NEQLSKYGDTKSAR IMLAELKKLIEANPLF
Sbjct: 98  VKDLKVFSAFNEELFKEITQLLTLENFRDNEQLSKYGDTKSARGIMLAELKKLIEANPLF 157

Query: 76  RDKLQFPTLKNSRLRTLINQSLNWQ 2
           RDKLQFP+LKNSRLRTLINQSLNWQ
Sbjct: 158 RDKLQFPSLKNSRLRTLINQSLNWQ 182


>ref|XP_003633079.1| PREDICTED: topless-related protein 4-like [Vitis vinifera]
          Length = 1123

 Score =  162 bits (409), Expect = 3e-38
 Identities = 81/85 (95%), Positives = 84/85 (98%)
 Frame = -3

Query: 256 VKDLKVFSAFNDELFKEITQLLTLENFRENEQLSKYGDTKSARSIMLAELKKLIEANPLF 77
           VKDLKVFSAFN+ELFKEITQLLTLENFR+NEQLSKYGDTKSAR IMLAELKKLIEANPLF
Sbjct: 98  VKDLKVFSAFNEELFKEITQLLTLENFRDNEQLSKYGDTKSARGIMLAELKKLIEANPLF 157

Query: 76  RDKLQFPTLKNSRLRTLINQSLNWQ 2
           RDKLQFP+LKNSRLRTLINQSLNWQ
Sbjct: 158 RDKLQFPSLKNSRLRTLINQSLNWQ 182


>ref|XP_002285341.2| PREDICTED: topless-related protein 4-like isoform 1 [Vitis
           vinifera] gi|297738983|emb|CBI28228.3| unnamed protein
           product [Vitis vinifera]
          Length = 1133

 Score =  162 bits (409), Expect = 3e-38
 Identities = 81/85 (95%), Positives = 84/85 (98%)
 Frame = -3

Query: 256 VKDLKVFSAFNDELFKEITQLLTLENFRENEQLSKYGDTKSARSIMLAELKKLIEANPLF 77
           VKDLKVFSAFN+ELFKEITQLLTLENFR+NEQLSKYGDTKSAR IMLAELKKLIEANPLF
Sbjct: 98  VKDLKVFSAFNEELFKEITQLLTLENFRDNEQLSKYGDTKSARGIMLAELKKLIEANPLF 157

Query: 76  RDKLQFPTLKNSRLRTLINQSLNWQ 2
           RDKLQFP+LKNSRLRTLINQSLNWQ
Sbjct: 158 RDKLQFPSLKNSRLRTLINQSLNWQ 182


Top