BLASTX nr result

ID: Coptis24_contig00012600 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012600
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633080.1| PREDICTED: topless-related protein 4-like [V...   230   1e-58
ref|XP_003633079.1| PREDICTED: topless-related protein 4-like [V...   230   1e-58
ref|XP_002285341.2| PREDICTED: topless-related protein 4-like is...   230   1e-58
ref|XP_002527178.1| WD-repeat protein, putative [Ricinus communi...   228   4e-58
ref|XP_003541476.1| PREDICTED: topless-related protein 4-like [G...   226   1e-57

>ref|XP_003633080.1| PREDICTED: topless-related protein 4-like [Vitis vinifera]
          Length = 1123

 Score =  230 bits (586), Expect = 1e-58
 Identities = 109/130 (83%), Positives = 117/130 (90%)
 Frame = +1

Query: 91  RENEQLSKFGDTKYARSIMLAELKKLIEANPLFRDKLQFPTLKTSRVRTLINQSLNWQHK 270
           R+NEQLSK+GDTK AR IMLAELKKLIEANPLFRDKLQFP+LK SR+RTLINQSLNWQH+
Sbjct: 125 RDNEQLSKYGDTKSARGIMLAELKKLIEANPLFRDKLQFPSLKNSRLRTLINQSLNWQHQ 184

Query: 271 LCKNPRSNPDIKTLFVDHSCGPSNGARAPSPVTNPLMVMPKPLGGFPPLSAHRPFQPAPA 450
           LCKNP++NPDIKTLFVDH+CG  NGARAPSPVTNPLM      GGFPPLSAH PFQPAPA
Sbjct: 185 LCKNPKANPDIKTLFVDHTCGQPNGARAPSPVTNPLMGTVPKAGGFPPLSAHGPFQPAPA 244

Query: 451 PLPVSLAGWM 480
           PLP SLAGWM
Sbjct: 245 PLPTSLAGWM 254


>ref|XP_003633079.1| PREDICTED: topless-related protein 4-like [Vitis vinifera]
          Length = 1123

 Score =  230 bits (586), Expect = 1e-58
 Identities = 109/130 (83%), Positives = 117/130 (90%)
 Frame = +1

Query: 91  RENEQLSKFGDTKYARSIMLAELKKLIEANPLFRDKLQFPTLKTSRVRTLINQSLNWQHK 270
           R+NEQLSK+GDTK AR IMLAELKKLIEANPLFRDKLQFP+LK SR+RTLINQSLNWQH+
Sbjct: 125 RDNEQLSKYGDTKSARGIMLAELKKLIEANPLFRDKLQFPSLKNSRLRTLINQSLNWQHQ 184

Query: 271 LCKNPRSNPDIKTLFVDHSCGPSNGARAPSPVTNPLMVMPKPLGGFPPLSAHRPFQPAPA 450
           LCKNP++NPDIKTLFVDH+CG  NGARAPSPVTNPLM      GGFPPLSAH PFQPAPA
Sbjct: 185 LCKNPKANPDIKTLFVDHTCGQPNGARAPSPVTNPLMGTVPKAGGFPPLSAHGPFQPAPA 244

Query: 451 PLPVSLAGWM 480
           PLP SLAGWM
Sbjct: 245 PLPTSLAGWM 254


>ref|XP_002285341.2| PREDICTED: topless-related protein 4-like isoform 1 [Vitis
           vinifera] gi|297738983|emb|CBI28228.3| unnamed protein
           product [Vitis vinifera]
          Length = 1133

 Score =  230 bits (586), Expect = 1e-58
 Identities = 109/130 (83%), Positives = 117/130 (90%)
 Frame = +1

Query: 91  RENEQLSKFGDTKYARSIMLAELKKLIEANPLFRDKLQFPTLKTSRVRTLINQSLNWQHK 270
           R+NEQLSK+GDTK AR IMLAELKKLIEANPLFRDKLQFP+LK SR+RTLINQSLNWQH+
Sbjct: 125 RDNEQLSKYGDTKSARGIMLAELKKLIEANPLFRDKLQFPSLKNSRLRTLINQSLNWQHQ 184

Query: 271 LCKNPRSNPDIKTLFVDHSCGPSNGARAPSPVTNPLMVMPKPLGGFPPLSAHRPFQPAPA 450
           LCKNP++NPDIKTLFVDH+CG  NGARAPSPVTNPLM      GGFPPLSAH PFQPAPA
Sbjct: 185 LCKNPKANPDIKTLFVDHTCGQPNGARAPSPVTNPLMGTVPKAGGFPPLSAHGPFQPAPA 244

Query: 451 PLPVSLAGWM 480
           PLP SLAGWM
Sbjct: 245 PLPTSLAGWM 254


>ref|XP_002527178.1| WD-repeat protein, putative [Ricinus communis]
           gi|223533443|gb|EEF35191.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 1134

 Score =  228 bits (581), Expect = 4e-58
 Identities = 110/130 (84%), Positives = 115/130 (88%)
 Frame = +1

Query: 91  RENEQLSKFGDTKYARSIMLAELKKLIEANPLFRDKLQFPTLKTSRVRTLINQSLNWQHK 270
           R+NEQLSK+GDTK AR+IMLAELKKLIEANPLFRDKLQFPTLK SR+RTLINQSLNWQH+
Sbjct: 125 RDNEQLSKYGDTKSARNIMLAELKKLIEANPLFRDKLQFPTLKNSRLRTLINQSLNWQHQ 184

Query: 271 LCKNPRSNPDIKTLFVDHSCGPSNGARAPSPVTNPLMVMPKPLGGFPPLSAHRPFQPAPA 450
           LCKNPR NPDIKTLFVDHSCG  NGARAPSPVTNPLM      GGFPPLSAH PFQP PA
Sbjct: 185 LCKNPRPNPDIKTLFVDHSCGQPNGARAPSPVTNPLMGALPKAGGFPPLSAHVPFQPTPA 244

Query: 451 PLPVSLAGWM 480
            LP SLAGWM
Sbjct: 245 ALPTSLAGWM 254


>ref|XP_003541476.1| PREDICTED: topless-related protein 4-like [Glycine max]
          Length = 1232

 Score =  226 bits (576), Expect = 1e-57
 Identities = 109/130 (83%), Positives = 112/130 (86%)
 Frame = +1

Query: 91  RENEQLSKFGDTKYARSIMLAELKKLIEANPLFRDKLQFPTLKTSRVRTLINQSLNWQHK 270
           R NEQLSK+GDTK AR IMLAELKKLIEANPLFRDKLQFPTLK SR+RTLINQSLNWQH+
Sbjct: 225 RHNEQLSKYGDTKSARGIMLAELKKLIEANPLFRDKLQFPTLKNSRLRTLINQSLNWQHQ 284

Query: 271 LCKNPRSNPDIKTLFVDHSCGPSNGARAPSPVTNPLMVMPKPLGGFPPLSAHRPFQPAPA 450
           LCKNPR NPDIKTLFVDHSCG  NGARAPSPVTNPLM      GGFPPL AH PFQP PA
Sbjct: 285 LCKNPRPNPDIKTLFVDHSCGQPNGARAPSPVTNPLMGAVPKAGGFPPLGAHGPFQPTPA 344

Query: 451 PLPVSLAGWM 480
            LP SLAGWM
Sbjct: 345 ALPTSLAGWM 354


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