BLASTX nr result

ID: Coptis24_contig00012596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012596
         (1324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275178.2| PREDICTED: vesicle-associated protein 4-2 [V...   350   6e-94
ref|XP_002274772.1| PREDICTED: vesicle-associated protein 4-2-li...   347   4e-93
gb|AFK48979.1| unknown [Lotus japonicus]                              345   2e-92
ref|XP_003540343.1| PREDICTED: vesicle-associated protein 4-2-li...   343   7e-92
gb|ACJ85389.1| unknown [Medicago truncatula]                          343   7e-92

>ref|XP_002275178.2| PREDICTED: vesicle-associated protein 4-2 [Vitis vinifera]
            gi|297745648|emb|CBI40859.3| unnamed protein product
            [Vitis vinifera]
          Length = 264

 Score =  350 bits (897), Expect = 6e-94
 Identities = 178/222 (80%), Positives = 191/222 (86%), Gaps = 3/222 (1%)
 Frame = -2

Query: 1020 YQQNQTQQHVDGSN---NNTVSSVARSLLPIWRRLRLDPSNKLYFPYEPGKQARSAIRIK 850
            +  NQ+   V+GSN   + +VSSVARSLLP  RRLRLDPSNKLYFPYEPGKQ RSAIRIK
Sbjct: 43   HHHNQSNMQVEGSNLHPSGSVSSVARSLLPTRRRLRLDPSNKLYFPYEPGKQVRSAIRIK 102

Query: 849  NTSRSHVAFKFQTTAPKSCFMRPPGGILAPGESIIATVFKFVEHPENNEKQSDQKSKVKF 670
            NTS+SHVAFKFQTTAPKSCFMRPPG ILAPGES+IATVFKFVEHPENNEK  +QKSKVKF
Sbjct: 103  NTSKSHVAFKFQTTAPKSCFMRPPGAILAPGESLIATVFKFVEHPENNEKPMEQKSKVKF 162

Query: 669  KIMSLKVKEAMDYVPELFDEQKDQVAVEQILRVVFLDIERPSPAMEKLNRMXXXXXXXXX 490
            KIMSLKVK  MDYVPE+FDE KDQVAVEQILRVVFLD+ERPSPA++KL R          
Sbjct: 163  KIMSLKVKGPMDYVPEMFDELKDQVAVEQILRVVFLDVERPSPALDKLKRQLAEAEAAVE 222

Query: 489  ARKKPQEDTGPRIVGEGLVIDEWKERRERYLARQQVEGVDSV 364
            ARKKP ED GPRI+GEGLVIDEWKERRERYLARQQVEGVDSV
Sbjct: 223  ARKKPPEDAGPRIIGEGLVIDEWKERRERYLARQQVEGVDSV 264


>ref|XP_002274772.1| PREDICTED: vesicle-associated protein 4-2-like [Vitis vinifera]
          Length = 259

 Score =  347 bits (890), Expect = 4e-93
 Identities = 185/256 (72%), Positives = 199/256 (77%), Gaps = 1/256 (0%)
 Frame = -2

Query: 1128 KIWSSLCKLPFWQTGXXXXXXXXXXXXXXXXXXXSVYQQNQTQQHVDGSNNNTVSSVARS 949
            K+WS LCK+PFWQ+                     V+QQ+Q+ Q +  SN   VS V +S
Sbjct: 13   KVWS-LCKMPFWQSNNASSSSSTSSSLQS------VHQQSQSHQVLQSSN--AVSFVTKS 63

Query: 948  LLPIWRRLRLDPSNKLYFPYEPGKQARSAIRIKNTSRSHVAFKFQTTAPKSCFMRPPGGI 769
            LLP  RRL LDP NKLYFPYEPGKQ RSAI IKN SRSH+AFKFQTTAPKSC+MRPPGGI
Sbjct: 64   LLPTRRRLHLDPPNKLYFPYEPGKQVRSAISIKNISRSHLAFKFQTTAPKSCYMRPPGGI 123

Query: 768  LAPGESIIATVFKFVEHPENNEKQS-DQKSKVKFKIMSLKVKEAMDYVPELFDEQKDQVA 592
            LAPGES+IATVFKFVEHPENNEK + DQKSKVKFKIMSLKVK  MDYVPELFDEQKDQVA
Sbjct: 124  LAPGESLIATVFKFVEHPENNEKPAVDQKSKVKFKIMSLKVKGEMDYVPELFDEQKDQVA 183

Query: 591  VEQILRVVFLDIERPSPAMEKLNRMXXXXXXXXXARKKPQEDTGPRIVGEGLVIDEWKER 412
             EQILRVVFLD ERPSP +EKL R          ARKKP EDTGPRIVGEGLVIDEWKER
Sbjct: 184  EEQILRVVFLDTERPSPPLEKLKRQLAEAEAALEARKKPPEDTGPRIVGEGLVIDEWKER 243

Query: 411  RERYLARQQVEGVDSV 364
            RERYLARQQVEG+DSV
Sbjct: 244  RERYLARQQVEGIDSV 259


>gb|AFK48979.1| unknown [Lotus japonicus]
          Length = 270

 Score =  345 bits (884), Expect = 2e-92
 Identities = 180/259 (69%), Positives = 202/259 (77%), Gaps = 3/259 (1%)
 Frame = -2

Query: 1152 IAEENGNGKIWSSLCKLPFWQTGXXXXXXXXXXXXXXXXXXXSVYQQNQTQQHVDGSNN- 976
            + E+ G+     SLC +PFWQT                    SV+QQNQ  Q +D SN+ 
Sbjct: 4    VGEKTGSDVKVRSLCSMPFWQT------TRASSSSATGSSMHSVHQQNQVVQSLDRSNHQ 57

Query: 975  --NTVSSVARSLLPIWRRLRLDPSNKLYFPYEPGKQARSAIRIKNTSRSHVAFKFQTTAP 802
              +TVSS+A+SLLPIW+RLRLDP NKLYFPYEPGKQ RSA+ IKNT +SHVAFKFQTTAP
Sbjct: 58   PSSTVSSLAKSLLPIWKRLRLDPPNKLYFPYEPGKQVRSAVAIKNTCKSHVAFKFQTTAP 117

Query: 801  KSCFMRPPGGILAPGESIIATVFKFVEHPENNEKQSDQKSKVKFKIMSLKVKEAMDYVPE 622
            KSCFMRPPGGILAPGESIIATVFKFVE P+NNEK  D+KS+VKFKIMSLKVK  MDYVPE
Sbjct: 118  KSCFMRPPGGILAPGESIIATVFKFVEPPDNNEKPVDKKSRVKFKIMSLKVKGEMDYVPE 177

Query: 621  LFDEQKDQVAVEQILRVVFLDIERPSPAMEKLNRMXXXXXXXXXARKKPQEDTGPRIVGE 442
            LFDEQ+DQVAVEQILRVVFLD ERPSPAM+KL +          ARKKP+E+TGPRI GE
Sbjct: 178  LFDEQRDQVAVEQILRVVFLDPERPSPAMDKLKQQLTESEATLEARKKPREETGPRIAGE 237

Query: 441  GLVIDEWKERRERYLARQQ 385
            GLVIDEWKERRERYLA+QQ
Sbjct: 238  GLVIDEWKERRERYLAKQQ 256


>ref|XP_003540343.1| PREDICTED: vesicle-associated protein 4-2-like [Glycine max]
          Length = 263

 Score =  343 bits (879), Expect = 7e-92
 Identities = 182/271 (67%), Positives = 209/271 (77%), Gaps = 4/271 (1%)
 Frame = -2

Query: 1164 LKMAIAEENGNGKIWSSLCKLPFWQTGXXXXXXXXXXXXXXXXXXXSVYQQNQTQ-QHVD 988
            +++   +   +GK WS  C++PFWQT                    +V+QQ+Q   Q VD
Sbjct: 1    MEVETEKSGSDGKGWS-FCRMPFWQT-------THTPSSSSMSYMHNVHQQSQNNAQSVD 52

Query: 987  GSNNN---TVSSVARSLLPIWRRLRLDPSNKLYFPYEPGKQARSAIRIKNTSRSHVAFKF 817
             S+++   TVSSVA+SLLP  RRLRLDPSNKLYFPYEPGKQ RSAI IKNT +SHVAFKF
Sbjct: 53   RSSHHSSTTVSSVAKSLLPTKRRLRLDPSNKLYFPYEPGKQVRSAIAIKNTCKSHVAFKF 112

Query: 816  QTTAPKSCFMRPPGGILAPGESIIATVFKFVEHPENNEKQSDQKSKVKFKIMSLKVKEAM 637
            QTTAPKSC+MRPPGGILAPGESIIATVFKFVE PENNEK  D+KSKVKFKIMSLKV+  M
Sbjct: 113  QTTAPKSCYMRPPGGILAPGESIIATVFKFVEPPENNEKSIDKKSKVKFKIMSLKVQGEM 172

Query: 636  DYVPELFDEQKDQVAVEQILRVVFLDIERPSPAMEKLNRMXXXXXXXXXARKKPQEDTGP 457
            DYVPELFDEQ+DQVA+EQILRV+FLD ERPSP ++KL RM         ARKKP E+ GP
Sbjct: 173  DYVPELFDEQRDQVAIEQILRVMFLDPERPSPVLDKLKRMLAEADAALEARKKPPEEKGP 232

Query: 456  RIVGEGLVIDEWKERRERYLARQQVEGVDSV 364
            R+ GEGLVIDEWKERRERYLA+QQV+GVDSV
Sbjct: 233  RVAGEGLVIDEWKERRERYLAQQQVQGVDSV 263


>gb|ACJ85389.1| unknown [Medicago truncatula]
          Length = 271

 Score =  343 bits (879), Expect = 7e-92
 Identities = 181/262 (69%), Positives = 204/262 (77%), Gaps = 5/262 (1%)
 Frame = -2

Query: 1134 NGKIWSSLCKLPFWQTGXXXXXXXXXXXXXXXXXXXSVYQQNQTQQHVDGS---NNNTVS 964
            +GK+W+  C++PFWQT                    +V+ Q+Q+   VD S   ++ TVS
Sbjct: 11   DGKVWN-FCRMPFWQTSNNPSSSSTTTSSSSTSYMHNVHHQSQSIHSVDRSVPQSSATVS 69

Query: 963  SVARSLLPIWRRLRLDPSNKLYFPYEPGKQARSAIRIKNTSRSHVAFKFQTTAPKSCFMR 784
            SVA+SLLP  RRLRLDP NKLYFPYEPGKQ RSAI IKNT +SHVAFKFQTTAPKSC+MR
Sbjct: 70   SVAKSLLPTRRRLRLDPPNKLYFPYEPGKQVRSAITIKNTCKSHVAFKFQTTAPKSCYMR 129

Query: 783  PPGGILAPGESIIATVFKFVEHPENNEKQSDQKSKVKFKIMSLKVKEAMDYVPELFDEQK 604
            PPGGILAPGESIIATVFKFVE PENNEK +DQKS+VKFKIMSLKV+  MDYVPELFDEQ+
Sbjct: 130  PPGGILAPGESIIATVFKFVEPPENNEKPTDQKSRVKFKIMSLKVQGEMDYVPELFDEQR 189

Query: 603  DQVAVEQILRVVFLDIERPSPAMEKLNRMXXXXXXXXXARKKPQEDTGPRIVGEGLVIDE 424
            DQVAVEQILRVVFLD +R SPAM+KL R          ARKKP E+TGPR+ GEGLVIDE
Sbjct: 190  DQVAVEQILRVVFLDPDRNSPAMDKLKRQLAEAEAALEARKKPPEETGPRVAGEGLVIDE 249

Query: 423  WKERRERYLARQQVEG--VDSV 364
            WKERRERYLA+QQVEG  VDSV
Sbjct: 250  WKERRERYLAKQQVEGVVVDSV 271


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