BLASTX nr result
ID: Coptis24_contig00012593
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00012593 (568 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002325709.1| predicted protein [Populus trichocarpa] gi|2... 80 2e-13 ref|XP_002518012.1| conserved hypothetical protein [Ricinus comm... 79 4e-13 ref|XP_003525160.1| PREDICTED: protein SUPPRESSOR OF GENE SILENC... 78 1e-12 emb|CBI27700.3| unnamed protein product [Vitis vinifera] 77 3e-12 ref|XP_002267929.1| PREDICTED: protein SUPPRESSOR OF GENE SILENC... 77 3e-12 >ref|XP_002325709.1| predicted protein [Populus trichocarpa] gi|222862584|gb|EEF00091.1| predicted protein [Populus trichocarpa] Length = 303 Score = 80.1 bits (196), Expect = 2e-13 Identities = 35/54 (64%), Positives = 42/54 (77%) Frame = +3 Query: 3 LHKHFANQGTDRHTWETNHVLYYPGGKCQLYGYMALKEDIDNFNRHCQAQLLLE 164 LHKHFA QGTDR+ W+ VL+Y GGK QLYGYMALKED+D FN+H Q + L+ Sbjct: 48 LHKHFAEQGTDRNAWDRRRVLFYQGGKRQLYGYMALKEDLDLFNQHSQGKSRLK 101 >ref|XP_002518012.1| conserved hypothetical protein [Ricinus communis] gi|223542994|gb|EEF44530.1| conserved hypothetical protein [Ricinus communis] Length = 634 Score = 79.3 bits (194), Expect = 4e-13 Identities = 33/54 (61%), Positives = 43/54 (79%) Frame = +3 Query: 3 LHKHFANQGTDRHTWETNHVLYYPGGKCQLYGYMALKEDIDNFNRHCQAQLLLE 164 LHKHF +QGTDR+ W+ VL+YPGGK QLYGYMA+KED++ FN+H Q + L+ Sbjct: 384 LHKHFVDQGTDRNAWDRRRVLFYPGGKRQLYGYMAVKEDLEIFNQHSQGRSKLK 437 >ref|XP_003525160.1| PREDICTED: protein SUPPRESSOR OF GENE SILENCING 3-like [Glycine max] Length = 645 Score = 77.8 bits (190), Expect = 1e-12 Identities = 35/55 (63%), Positives = 43/55 (78%), Gaps = 1/55 (1%) Frame = +3 Query: 3 LHKHFANQGTDRHTWETNHV-LYYPGGKCQLYGYMALKEDIDNFNRHCQAQLLLE 164 LHKHFA QGTDR W ++H L+ PGG+ QLYGYMA+KED+D FNRHCQ + L+ Sbjct: 389 LHKHFAEQGTDRDAWFSHHRRLFLPGGRRQLYGYMAIKEDLDFFNRHCQGKSRLK 443 >emb|CBI27700.3| unnamed protein product [Vitis vinifera] Length = 469 Score = 76.6 bits (187), Expect = 3e-12 Identities = 33/54 (61%), Positives = 40/54 (74%) Frame = +3 Query: 3 LHKHFANQGTDRHTWETNHVLYYPGGKCQLYGYMALKEDIDNFNRHCQAQLLLE 164 LHKHFA QGTDR W+ V +YPGGK QLYGYMA+KED+ FN+H Q + L+ Sbjct: 244 LHKHFAEQGTDREAWDRRRVPFYPGGKRQLYGYMAIKEDLTLFNQHSQGKSKLK 297 >ref|XP_002267929.1| PREDICTED: protein SUPPRESSOR OF GENE SILENCING 3-like [Vitis vinifera] Length = 718 Score = 76.6 bits (187), Expect = 3e-12 Identities = 33/54 (61%), Positives = 40/54 (74%) Frame = +3 Query: 3 LHKHFANQGTDRHTWETNHVLYYPGGKCQLYGYMALKEDIDNFNRHCQAQLLLE 164 LHKHFA QGTDR W+ V +YPGGK QLYGYMA+KED+ FN+H Q + L+ Sbjct: 468 LHKHFAEQGTDREAWDRRRVPFYPGGKRQLYGYMAIKEDLTLFNQHSQGKSKLK 521