BLASTX nr result

ID: Coptis24_contig00012589 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012589
         (779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25947.3| unnamed protein product [Vitis vinifera]              182   9e-44
ref|XP_002274678.1| PREDICTED: uncharacterized protein LOC100244...   182   9e-44
ref|XP_003578821.1| PREDICTED: uncharacterized protein LOC100845...   181   1e-43
gb|ABA95965.1| expressed protein [Oryza sativa Japonica Group] g...   176   5e-42
gb|EAY82490.1| hypothetical protein OsI_37707 [Oryza sativa Indi...   176   5e-42

>emb|CBI25947.3| unnamed protein product [Vitis vinifera]
          Length = 182

 Score =  182 bits (461), Expect = 9e-44
 Identities = 91/127 (71%), Positives = 103/127 (81%)
 Frame = -2

Query: 706 NEDGVQINCFTEDLESYTLHFQIIRLQKQIFVWIGCNSAKFGHLYAAAPCALRKSQNNMV 527
           N+DGVQ+ CFTE  +  TLHFQIIRL KQI+ WIG NSAK GH+YAAA        NN V
Sbjct: 58  NDDGVQVTCFTEVSDDVTLHFQIIRLHKQIYAWIGSNSAKLGHMYAAASTR----PNNTV 113

Query: 526 SVASILGGASDNTGSSIARRLVLKTGLNIVLACNIPKNSPMLEADAEKILIQKLRSLGYA 347
           SV SILGGASDNTGS IARRL L+TG+NI+LACNIPKN+PMLEA+AEK L+QKL +LGY 
Sbjct: 114 SVTSILGGASDNTGSGIARRLALRTGVNIILACNIPKNNPMLEAEAEKKLVQKLINLGYT 173

Query: 346 RPKSEGS 326
           RPKSEGS
Sbjct: 174 RPKSEGS 180


>ref|XP_002274678.1| PREDICTED: uncharacterized protein LOC100244351 [Vitis vinifera]
           gi|359477623|ref|XP_003632004.1| PREDICTED:
           uncharacterized protein LOC100853705 [Vitis vinifera]
           gi|297736789|emb|CBI25990.3| unnamed protein product
           [Vitis vinifera]
          Length = 138

 Score =  182 bits (461), Expect = 9e-44
 Identities = 91/127 (71%), Positives = 103/127 (81%)
 Frame = -2

Query: 706 NEDGVQINCFTEDLESYTLHFQIIRLQKQIFVWIGCNSAKFGHLYAAAPCALRKSQNNMV 527
           N+DGVQ+ CFTE  +  TLHFQIIRL KQI+ WIG NSAK GH+YAAA        NN V
Sbjct: 14  NDDGVQVTCFTEVSDDVTLHFQIIRLHKQIYAWIGSNSAKLGHMYAAASTR----PNNTV 69

Query: 526 SVASILGGASDNTGSSIARRLVLKTGLNIVLACNIPKNSPMLEADAEKILIQKLRSLGYA 347
           SV SILGGASDNTGS IARRL L+TG+NI+LACNIPKN+PMLEA+AEK L+QKL +LGY 
Sbjct: 70  SVTSILGGASDNTGSGIARRLALRTGVNIILACNIPKNNPMLEAEAEKKLVQKLINLGYT 129

Query: 346 RPKSEGS 326
           RPKSEGS
Sbjct: 130 RPKSEGS 136


>ref|XP_003578821.1| PREDICTED: uncharacterized protein LOC100845545 [Brachypodium
           distachyon]
          Length = 161

 Score =  181 bits (460), Expect = 1e-43
 Identities = 92/129 (71%), Positives = 104/129 (80%)
 Frame = -2

Query: 721 SCDDNNEDGVQINCFTEDLESYTLHFQIIRLQKQIFVWIGCNSAKFGHLYAAAPCALRKS 542
           S D + E G Q++CFTEDL   TLHFQIIRL KQI+ WIGCN+AKFGHLYAAA       
Sbjct: 28  SGDPSAEGGAQVSCFTEDLHDVTLHFQIIRLSKQIYAWIGCNTAKFGHLYAAATTR---- 83

Query: 541 QNNMVSVASILGGASDNTGSSIARRLVLKTGLNIVLACNIPKNSPMLEADAEKILIQKLR 362
             N VSV S+LGG SDNTGSS+ARRLVLKTGLNIVLACNIPK+SPMLEA AE+ L++KLR
Sbjct: 84  PGNGVSVTSVLGGTSDNTGSSMARRLVLKTGLNIVLACNIPKDSPMLEAAAERKLVEKLR 143

Query: 361 SLGYARPKS 335
           SLGY RPK+
Sbjct: 144 SLGYIRPKA 152


>gb|ABA95965.1| expressed protein [Oryza sativa Japonica Group]
           gi|215768938|dbj|BAH01167.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 161

 Score =  176 bits (446), Expect = 5e-42
 Identities = 88/129 (68%), Positives = 101/129 (78%)
 Frame = -2

Query: 721 SCDDNNEDGVQINCFTEDLESYTLHFQIIRLQKQIFVWIGCNSAKFGHLYAAAPCALRKS 542
           S D ++E GVQ+ CFTEDL    LHFQIIR  KQI+ W+GCN+AKFGHLYAAA       
Sbjct: 28  SGDPSSEGGVQVTCFTEDLHDVILHFQIIRFSKQIYAWVGCNTAKFGHLYAAASTR---- 83

Query: 541 QNNMVSVASILGGASDNTGSSIARRLVLKTGLNIVLACNIPKNSPMLEADAEKILIQKLR 362
             N VSV S+LGG SDNTGS +ARRLVLKTGLNIVLACNIPK+SPMLEA AE+ LI+KLR
Sbjct: 84  PGNGVSVTSVLGGTSDNTGSGMARRLVLKTGLNIVLACNIPKDSPMLEAAAERKLIEKLR 143

Query: 361 SLGYARPKS 335
            LGY RP++
Sbjct: 144 GLGYVRPRA 152


>gb|EAY82490.1| hypothetical protein OsI_37707 [Oryza sativa Indica Group]
          Length = 161

 Score =  176 bits (446), Expect = 5e-42
 Identities = 88/129 (68%), Positives = 101/129 (78%)
 Frame = -2

Query: 721 SCDDNNEDGVQINCFTEDLESYTLHFQIIRLQKQIFVWIGCNSAKFGHLYAAAPCALRKS 542
           S D ++E GVQ+ CFTEDL    LHFQIIR  KQI+ W+GCN+AKFGHLYAAA       
Sbjct: 28  SGDPSSEGGVQVTCFTEDLHDVILHFQIIRFSKQIYAWVGCNTAKFGHLYAAASTR---- 83

Query: 541 QNNMVSVASILGGASDNTGSSIARRLVLKTGLNIVLACNIPKNSPMLEADAEKILIQKLR 362
             N VSV S+LGG SDNTGS +ARRLVLKTGLNIVLACNIPK+SPMLEA AE+ LI+KLR
Sbjct: 84  PGNGVSVTSVLGGTSDNTGSGMARRLVLKTGLNIVLACNIPKDSPMLEAAAERKLIEKLR 143

Query: 361 SLGYARPKS 335
            LGY RP++
Sbjct: 144 GLGYVRPRA 152


Top