BLASTX nr result

ID: Coptis24_contig00012573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012573
         (1652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002466186.1| hypothetical protein SORBIDRAFT_01g003130 [S...   372   e-110
ref|NP_001242670.1| uncharacterized protein LOC100798404 [Glycin...   373   e-110
gb|AFK44181.1| unknown [Lotus japonicus]                              371   e-110
ref|XP_002316286.1| predicted protein [Populus trichocarpa] gi|2...   366   e-110
ref|XP_002314178.1| predicted protein [Populus trichocarpa] gi|2...   369   e-110

>ref|XP_002466186.1| hypothetical protein SORBIDRAFT_01g003130 [Sorghum bicolor]
            gi|241920040|gb|EER93184.1| hypothetical protein
            SORBIDRAFT_01g003130 [Sorghum bicolor]
          Length = 418

 Score =  372 bits (954), Expect(2) = e-110
 Identities = 181/275 (65%), Positives = 219/275 (79%)
 Frame = +1

Query: 493  YKGWIDQHNLTPTKPGTGVTVAVKMHKPGSCQLGLGKLLTEKRSLGHLYHPNLVSLVGYC 672
            YKGWID++ L+P +PGTG+ VAVK   P   Q G  + L E   LG   HPNLV L+GYC
Sbjct: 93   YKGWIDENTLSPCRPGTGIAVAVKKLNPEGLQ-GHREWLAEVNYLGQFCHPNLVKLIGYC 151

Query: 673  LEDGNSVLVYEFVPRGSLDNHLFGRGSNGIPLSWSIRMKVALGAAKGLAFLHSTETNVIH 852
            +ED + +LVYEF+PRGSL+NHLF RGS   PLSW++RMKVALGAAKGLA+LHS E  VI+
Sbjct: 152  VEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRMKVALGAAKGLAYLHSAEAKVIY 211

Query: 853  RDFNSSNILLDLNYSVKLSGFGLAKNGPIGDESHVSTRVMGTYGYAAPEYVSTGHLTAKS 1032
            RDF +SNILLD +YS KLS FGLAK+GP+G++SHVSTRVMGTYGYAAPEY+STGHLT KS
Sbjct: 212  RDFKTSNILLDTDYSAKLSDFGLAKDGPVGEKSHVSTRVMGTYGYAAPEYLSTGHLTTKS 271

Query: 1033 DVYGFGVVLLEILCGRRAVDRNRPSVEHNLVEWAKPYLKQTRKIVRVLDIHLKGQYSLGD 1212
            D+Y FGVVLLE+L GRRA+D+NRP  EHNLVEWA+PYL   RKI R+LD  L+GQY+L  
Sbjct: 272  DIYSFGVVLLEMLSGRRAIDKNRPQGEHNLVEWARPYLAHKRKIFRILDTRLEGQYNLNS 331

Query: 1213 AKKIANIALQCTSNEAKHRPKMDEIVKALEELQVS 1317
            A+ IA +AL+C S EAK RP MD++V  L+E+Q S
Sbjct: 332  AQSIAALALECLSYEAKMRPTMDDVVTILQEVQDS 366



 Score = 57.0 bits (136), Expect(2) = e-110
 Identities = 25/37 (67%), Positives = 30/37 (81%)
 Frame = +2

Query: 323 LKSFSFKQLKAATRNFCSDTLLGEGAFGLVYKGWIDQ 433
           +K F+F  LKAATRNF  D++LGEG FG VYKGWID+
Sbjct: 63  VKVFTFNNLKAATRNFRPDSVLGEGGFGSVYKGWIDE 99


>ref|NP_001242670.1| uncharacterized protein LOC100798404 [Glycine max]
            gi|255647315|gb|ACU24124.1| unknown [Glycine max]
          Length = 422

 Score =  373 bits (957), Expect(2) = e-110
 Identities = 186/274 (67%), Positives = 220/274 (80%)
 Frame = +1

Query: 493  YKGWIDQHNLTPTKPGTGVTVAVKMHKPGSCQLGLGKLLTEKRSLGHLYHPNLVSLVGYC 672
            +KGWID+++LT TKPGTG+ +AVK       Q G  + L E   LG L HP+LV L+G+C
Sbjct: 89   FKGWIDENSLTATKPGTGIVIAVKRLNQDGIQ-GHREWLAEVNYLGQLSHPHLVRLIGFC 147

Query: 673  LEDGNSVLVYEFVPRGSLDNHLFGRGSNGIPLSWSIRMKVALGAAKGLAFLHSTETNVIH 852
            LED + +LVYEF+PRGSL+NHLF RGS   PLSWS+R+KVAL AAKGLAFLHSTE  VI+
Sbjct: 148  LEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWSLRLKVALDAAKGLAFLHSTEAKVIY 207

Query: 853  RDFNSSNILLDLNYSVKLSGFGLAKNGPIGDESHVSTRVMGTYGYAAPEYVSTGHLTAKS 1032
            RDF +SNILLD  Y+ KLS FGLAK+GP GD+SHVSTRVMGTYGYAAPEY++TGHLTAKS
Sbjct: 208  RDFKTSNILLDSKYNAKLSDFGLAKDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKS 267

Query: 1033 DVYGFGVVLLEILCGRRAVDRNRPSVEHNLVEWAKPYLKQTRKIVRVLDIHLKGQYSLGD 1212
            DVY FGVVLLE+L G+RAVD+NRPS +HNLVEWAKPYL   RKI RVLD  L+GQYS  D
Sbjct: 268  DVYSFGVVLLEMLSGKRAVDKNRPSGQHNLVEWAKPYLANKRKIFRVLDTRLEGQYSTDD 327

Query: 1213 AKKIANIALQCTSNEAKHRPKMDEIVKALEELQV 1314
            A K+A +AL+C S E+K RP MDE+V  LE+LQV
Sbjct: 328  ACKLATLALRCLSIESKFRPNMDEVVTTLEQLQV 361



 Score = 55.1 bits (131), Expect(2) = e-110
 Identities = 24/37 (64%), Positives = 29/37 (78%)
 Frame = +2

Query: 323 LKSFSFKQLKAATRNFCSDTLLGEGAFGLVYKGWIDQ 433
           LKSF   +LK ATRNF  D++LGEG FG V+KGWID+
Sbjct: 59  LKSFPLSELKTATRNFRPDSVLGEGGFGSVFKGWIDE 95


>gb|AFK44181.1| unknown [Lotus japonicus]
          Length = 401

 Score =  371 bits (953), Expect(2) = e-110
 Identities = 183/279 (65%), Positives = 220/279 (78%)
 Frame = +1

Query: 493  YKGWIDQHNLTPTKPGTGVTVAVKMHKPGSCQLGLGKLLTEKRSLGHLYHPNLVSLVGYC 672
            YKGWID+ +L P +PGTG+ +AVK       Q G  + LTE   LG L+HPNLV LVGYC
Sbjct: 91   YKGWIDEQSLAPARPGTGMVIAVKRLNQEGLQ-GHSEWLTEINYLGQLHHPNLVRLVGYC 149

Query: 673  LEDGNSVLVYEFVPRGSLDNHLFGRGSNGIPLSWSIRMKVALGAAKGLAFLHSTETNVIH 852
            +ED   +LVYEF+ +GSLDNHLF RGS   PLSWSIRMKVAL AAKGLA+LHS E  VI+
Sbjct: 150  VEDDQRLLVYEFLTKGSLDNHLFRRGSYFQPLSWSIRMKVALDAAKGLAYLHSDEAKVIY 209

Query: 853  RDFNSSNILLDLNYSVKLSGFGLAKNGPIGDESHVSTRVMGTYGYAAPEYVSTGHLTAKS 1032
            RDF +SNILLD NY  KLS FGLAK+GP+GD+SHVST VMGTYGYAAPEY++TGHLT KS
Sbjct: 210  RDFKTSNILLDSNYRAKLSDFGLAKDGPVGDKSHVSTGVMGTYGYAAPEYMATGHLTKKS 269

Query: 1033 DVYGFGVVLLEILCGRRAVDRNRPSVEHNLVEWAKPYLKQTRKIVRVLDIHLKGQYSLGD 1212
            DVY FGVVLLEI+ G+RA+D+NRPS EHNL+EWAKPYL   R+I +V+D  ++GQY+L +
Sbjct: 270  DVYSFGVVLLEIMSGKRALDQNRPSGEHNLIEWAKPYLSNKRRIFQVMDARIEGQYTLRE 329

Query: 1213 AKKIANIALQCTSNEAKHRPKMDEIVKALEELQVSIYET 1329
            A K+AN+A+QC S E + RPKMDE+V  LEELQ S  +T
Sbjct: 330  AMKVANLAIQCLSVEPRFRPKMDEVVSVLEELQGSHDDT 368



 Score = 56.6 bits (135), Expect(2) = e-110
 Identities = 23/37 (62%), Positives = 31/37 (83%)
 Frame = +2

Query: 323 LKSFSFKQLKAATRNFCSDTLLGEGAFGLVYKGWIDQ 433
           +KSF+F +LK +TRNF  D+++GEG FG VYKGWID+
Sbjct: 61  MKSFTFGELKTSTRNFRPDSMVGEGGFGCVYKGWIDE 97


>ref|XP_002316286.1| predicted protein [Populus trichocarpa] gi|222865326|gb|EEF02457.1|
            predicted protein [Populus trichocarpa]
          Length = 415

 Score =  366 bits (940), Expect(2) = e-110
 Identities = 178/275 (64%), Positives = 216/275 (78%)
 Frame = +1

Query: 493  YKGWIDQHNLTPTKPGTGVTVAVKMHKPGSCQLGLGKLLTEKRSLGHLYHPNLVSLVGYC 672
            +KGWID+H+LT  KPGTG  +AVK     S Q G  + L E   LG LYHPNLV L+GYC
Sbjct: 89   FKGWIDEHSLTAAKPGTGTVIAVKRLNQESSQ-GHQEWLAEINYLGQLYHPNLVKLIGYC 147

Query: 673  LEDGNSVLVYEFVPRGSLDNHLFGRGSNGIPLSWSIRMKVALGAAKGLAFLHSTETNVIH 852
            LED + +LVYEF+P+GSL+NHLF R S   PLSW++RMKVAL AAKGL +LHS +  VI+
Sbjct: 148  LEDDHRLLVYEFMPKGSLENHLFRRASYFQPLSWNLRMKVALDAAKGLEYLHSDKAKVIY 207

Query: 853  RDFNSSNILLDLNYSVKLSGFGLAKNGPIGDESHVSTRVMGTYGYAAPEYVSTGHLTAKS 1032
            RDF +SNILLD NY  KLS FGLAK+GP G +SHVSTR+MGTYGYAAPEY++TGHLTA+S
Sbjct: 208  RDFKASNILLDSNYRAKLSDFGLAKDGPTGSKSHVSTRIMGTYGYAAPEYMATGHLTARS 267

Query: 1033 DVYGFGVVLLEILCGRRAVDRNRPSVEHNLVEWAKPYLKQTRKIVRVLDIHLKGQYSLGD 1212
            DVY FGVVLLE+L GRRA+D+NRPS EHNLVEWA+PYL   R+I +V+D  ++GQYS  D
Sbjct: 268  DVYSFGVVLLEMLSGRRAIDKNRPSKEHNLVEWARPYLSSKRRIFQVMDARIQGQYSSSD 327

Query: 1213 AKKIANIALQCTSNEAKHRPKMDEIVKALEELQVS 1317
            A K AN+A+QC S E K+RP M+ +VKALE+L  S
Sbjct: 328  ALKAANLAIQCLSTEPKYRPNMEAVVKALEQLHNS 362



 Score = 61.2 bits (147), Expect(2) = e-110
 Identities = 27/37 (72%), Positives = 32/37 (86%)
 Frame = +2

Query: 323 LKSFSFKQLKAATRNFCSDTLLGEGAFGLVYKGWIDQ 433
           LKSFSF +LKAATRNF  D++LGEG FG V+KGWID+
Sbjct: 59  LKSFSFSELKAATRNFRPDSVLGEGGFGCVFKGWIDE 95


>ref|XP_002314178.1| predicted protein [Populus trichocarpa] gi|222850586|gb|EEE88133.1|
            predicted protein [Populus trichocarpa]
          Length = 391

 Score =  369 bits (946), Expect(2) = e-110
 Identities = 184/275 (66%), Positives = 218/275 (79%)
 Frame = +1

Query: 493  YKGWIDQHNLTPTKPGTGVTVAVKMHKPGSCQLGLGKLLTEKRSLGHLYHPNLVSLVGYC 672
            +KGWID+   +  KPGTG+ +AVK       Q G  + L E   LG LY+P+LV L+GYC
Sbjct: 75   FKGWIDEQTFSAAKPGTGMVIAVKRLNQDGFQ-GHKEWLAEVNYLGQLYNPHLVKLIGYC 133

Query: 673  LEDGNSVLVYEFVPRGSLDNHLFGRGSNGIPLSWSIRMKVALGAAKGLAFLHSTETNVIH 852
            LED + +LVYEF+PRGSL+NHLF RGS   PLSW++RMKV+LGAAKGLAFLHS ET VI+
Sbjct: 134  LEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRMKVSLGAAKGLAFLHSAETKVIY 193

Query: 853  RDFNSSNILLDLNYSVKLSGFGLAKNGPIGDESHVSTRVMGTYGYAAPEYVSTGHLTAKS 1032
            RDF +SNILLD  Y+ KLS FGLAK+GP GD+SHVSTRVMGTYGYAAPEY++TGHLTAKS
Sbjct: 194  RDFKTSNILLDSKYNAKLSDFGLAKDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKS 253

Query: 1033 DVYGFGVVLLEILCGRRAVDRNRPSVEHNLVEWAKPYLKQTRKIVRVLDIHLKGQYSLGD 1212
            DVY FGVVLLE+L GRRAVD+NRPS EHNLVEWAKPYL   RKI R+LD  L+GQYS+  
Sbjct: 254  DVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLANKRKIFRILDSRLEGQYSMDV 313

Query: 1213 AKKIANIALQCTSNEAKHRPKMDEIVKALEELQVS 1317
            A K++ +AL+C S E K RP MDE+V ALE+LQ S
Sbjct: 314  AYKVSTLALRCLSIETKFRPTMDEVVTALEQLQDS 348



 Score = 58.2 bits (139), Expect(2) = e-110
 Identities = 26/37 (70%), Positives = 30/37 (81%)
 Frame = +2

Query: 323 LKSFSFKQLKAATRNFCSDTLLGEGAFGLVYKGWIDQ 433
           LKSFSF  LK ATRNF  D++LGEG FG V+KGWID+
Sbjct: 45  LKSFSFSDLKMATRNFRPDSVLGEGGFGSVFKGWIDE 81


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