BLASTX nr result

ID: Coptis24_contig00012553 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012553
         (226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524564.1| PREDICTED: uncharacterized protein LOC100793...   103   2e-20
ref|XP_002521488.1| tRNA-pseudouridine synthase, putative [Ricin...   102   3e-20
ref|XP_002298554.1| predicted protein [Populus trichocarpa] gi|2...   101   7e-20
ref|XP_002272379.1| PREDICTED: uncharacterized protein LOC100259...   100   1e-19
emb|CBI34844.3| unnamed protein product [Vitis vinifera]              100   1e-19

>ref|XP_003524564.1| PREDICTED: uncharacterized protein LOC100793939 [Glycine max]
          Length = 485

 Score =  103 bits (256), Expect = 2e-20
 Identities = 50/52 (96%), Positives = 50/52 (96%)
 Frame = -1

Query: 226 KGTYIRSLCADFGKALGSCAHLTALRRDSIGQYSADDALEFQELEEAITKGY 71
           KGTYIRSLCADFGKALGSCAHLTALRRDSIGQYSADDA EFQELEEAITK Y
Sbjct: 433 KGTYIRSLCADFGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEAITKNY 484


>ref|XP_002521488.1| tRNA-pseudouridine synthase, putative [Ricinus communis]
           gi|223539387|gb|EEF40978.1| tRNA-pseudouridine synthase,
           putative [Ricinus communis]
          Length = 513

 Score =  102 bits (254), Expect = 3e-20
 Identities = 48/53 (90%), Positives = 51/53 (96%)
 Frame = -1

Query: 226 KGTYIRSLCADFGKALGSCAHLTALRRDSIGQYSADDALEFQELEEAITKGYF 68
           KGTY+RSLCADFGKALGSCAHLTALRRDSIG+YSADDA EF+ELEEAITK YF
Sbjct: 461 KGTYVRSLCADFGKALGSCAHLTALRRDSIGEYSADDAWEFKELEEAITKNYF 513


>ref|XP_002298554.1| predicted protein [Populus trichocarpa] gi|222845812|gb|EEE83359.1|
           predicted protein [Populus trichocarpa]
          Length = 95

 Score =  101 bits (251), Expect = 7e-20
 Identities = 48/53 (90%), Positives = 51/53 (96%)
 Frame = -1

Query: 226 KGTYIRSLCADFGKALGSCAHLTALRRDSIGQYSADDALEFQELEEAITKGYF 68
           KGTYIRSLCADFGKALGSCAHLTALRRDSIG+YSA+DA EF+ELEEAITK YF
Sbjct: 43  KGTYIRSLCADFGKALGSCAHLTALRRDSIGEYSAEDAWEFKELEEAITKNYF 95


>ref|XP_002272379.1| PREDICTED: uncharacterized protein LOC100259460 [Vitis vinifera]
          Length = 520

 Score =  100 bits (250), Expect = 1e-19
 Identities = 48/53 (90%), Positives = 50/53 (94%)
 Frame = -1

Query: 226 KGTYIRSLCADFGKALGSCAHLTALRRDSIGQYSADDALEFQELEEAITKGYF 68
           KGTYIRSLCADFGKALGSCAHL ALRRDSIG YSADDA EF++LEEAITKGYF
Sbjct: 468 KGTYIRSLCADFGKALGSCAHLAALRRDSIGPYSADDAWEFKDLEEAITKGYF 520


>emb|CBI34844.3| unnamed protein product [Vitis vinifera]
          Length = 502

 Score =  100 bits (250), Expect = 1e-19
 Identities = 48/53 (90%), Positives = 50/53 (94%)
 Frame = -1

Query: 226 KGTYIRSLCADFGKALGSCAHLTALRRDSIGQYSADDALEFQELEEAITKGYF 68
           KGTYIRSLCADFGKALGSCAHL ALRRDSIG YSADDA EF++LEEAITKGYF
Sbjct: 450 KGTYIRSLCADFGKALGSCAHLAALRRDSIGPYSADDAWEFKDLEEAITKGYF 502


Top