BLASTX nr result

ID: Coptis24_contig00012542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012542
         (2585 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32641.3| unnamed protein product [Vitis vinifera]              333   2e-88
ref|XP_002276631.1| PREDICTED: probable protein phosphatase 2C 3...   333   2e-88
ref|XP_002530628.1| protein phosphatase 2c, putative [Ricinus co...   319   2e-84
ref|XP_002281610.1| PREDICTED: probable protein phosphatase 2C 3...   319   2e-84
ref|XP_002327730.1| predicted protein [Populus trichocarpa] gi|1...   318   5e-84

>emb|CBI32641.3| unnamed protein product [Vitis vinifera]
          Length = 380

 Score =  333 bits (853), Expect = 2e-88
 Identities = 160/219 (73%), Positives = 190/219 (86%)
 Frame = +2

Query: 1925 VDKLLWSMDLGHHFNGEFSMAVTQANNLLEDQSQVESGPLGSMNSGLRGTFVGIYDGHGG 2104
            VD LLW  DLG H NGEFSMAV QAN+LLEDQSQ+ESGPL  ++SG  GTF+G+YDGHGG
Sbjct: 26   VDGLLWYKDLGQHINGEFSMAVIQANSLLEDQSQLESGPLSFLDSGPYGTFIGVYDGHGG 85

Query: 2105 PEAARFINDHLFNNLKKSTSNHRNMSVDVIREAYSATEEEFLCLVQKEWLIKPQMASVGS 2284
            PEA+RF+N++LF NLKK  + H+ +S  VIR+A+SATEE FL LV+K+WL KPQ+ASVGS
Sbjct: 86   PEASRFVNENLFPNLKKFATEHQEISESVIRKAFSATEEGFLSLVKKQWLTKPQIASVGS 145

Query: 2285 CCLVGILCAGTLYIANVGNSRVVLGRSEKASMDVTAIQLSTEHDASIESIREELRSLHPH 2464
            CCL GI+C G LYIANVG+SR VLGR+E+AS +VTAIQLSTEH+ASIES+REELRSLHPH
Sbjct: 146  CCLAGIICNGLLYIANVGDSRAVLGRAERASREVTAIQLSTEHNASIESVREELRSLHPH 205

Query: 2465 DSQIVVLTRRVWRVKGIIKISRSIGDAYLKRAEFNREPL 2581
            D  IVVL  +VWRVKG+I++SRSIGDAYLK+AEFNREPL
Sbjct: 206  DKHIVVLRHKVWRVKGLIQVSRSIGDAYLKKAEFNREPL 244



 Score = 65.5 bits (158), Expect = 7e-08
 Identities = 38/73 (52%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
 Frame = +2

Query: 1019 VSTGVKKMSIPCWKPAVEGEEGNLKSTYDIGQVDGQLCHKDLGHDNKVESSMTVTRANN- 1195
            +S    KM  PCWKP+VEG+          G+VDG L +KDLG     E SM V +AN+ 
Sbjct: 2    ISIYFMKMVKPCWKPSVEGDSS--------GRVDGLLWYKDLGQHINGEFSMAVIQANSL 53

Query: 1196 LEDQSQVESGPLS 1234
            LEDQSQ+ESGPLS
Sbjct: 54   LEDQSQLESGPLS 66


>ref|XP_002276631.1| PREDICTED: probable protein phosphatase 2C 38-like [Vitis vinifera]
          Length = 387

 Score =  333 bits (853), Expect = 2e-88
 Identities = 160/219 (73%), Positives = 190/219 (86%)
 Frame = +2

Query: 1925 VDKLLWSMDLGHHFNGEFSMAVTQANNLLEDQSQVESGPLGSMNSGLRGTFVGIYDGHGG 2104
            VD LLW  DLG H NGEFSMAV QAN+LLEDQSQ+ESGPL  ++SG  GTF+G+YDGHGG
Sbjct: 33   VDGLLWYKDLGQHINGEFSMAVIQANSLLEDQSQLESGPLSFLDSGPYGTFIGVYDGHGG 92

Query: 2105 PEAARFINDHLFNNLKKSTSNHRNMSVDVIREAYSATEEEFLCLVQKEWLIKPQMASVGS 2284
            PEA+RF+N++LF NLKK  + H+ +S  VIR+A+SATEE FL LV+K+WL KPQ+ASVGS
Sbjct: 93   PEASRFVNENLFPNLKKFATEHQEISESVIRKAFSATEEGFLSLVKKQWLTKPQIASVGS 152

Query: 2285 CCLVGILCAGTLYIANVGNSRVVLGRSEKASMDVTAIQLSTEHDASIESIREELRSLHPH 2464
            CCL GI+C G LYIANVG+SR VLGR+E+AS +VTAIQLSTEH+ASIES+REELRSLHPH
Sbjct: 153  CCLAGIICNGLLYIANVGDSRAVLGRAERASREVTAIQLSTEHNASIESVREELRSLHPH 212

Query: 2465 DSQIVVLTRRVWRVKGIIKISRSIGDAYLKRAEFNREPL 2581
            D  IVVL  +VWRVKG+I++SRSIGDAYLK+AEFNREPL
Sbjct: 213  DKHIVVLRHKVWRVKGLIQVSRSIGDAYLKKAEFNREPL 251



 Score = 66.2 bits (160), Expect = 4e-08
 Identities = 39/73 (53%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
 Frame = +2

Query: 1019 VSTGVKKMSIPCWKPAVEGEEGNLKSTYDIGQVDGQLCHKDLGHDNKVESSMTVTRANN- 1195
            +S    KM  PCWKP+VEG+ G        G+VDG L +KDLG     E SM V +AN+ 
Sbjct: 2    ISIYFMKMVKPCWKPSVEGD-GTRGKGDSSGRVDGLLWYKDLGQHINGEFSMAVIQANSL 60

Query: 1196 LEDQSQVESGPLS 1234
            LEDQSQ+ESGPLS
Sbjct: 61   LEDQSQLESGPLS 73


>ref|XP_002530628.1| protein phosphatase 2c, putative [Ricinus communis]
            gi|223529801|gb|EEF31736.1| protein phosphatase 2c,
            putative [Ricinus communis]
          Length = 395

 Score =  319 bits (818), Expect = 2e-84
 Identities = 153/219 (69%), Positives = 184/219 (84%)
 Frame = +2

Query: 1928 DKLLWSMDLGHHFNGEFSMAVTQANNLLEDQSQVESGPLGSMNSGLRGTFVGIYDGHGGP 2107
            D LLW  D G H NGEFSMAV QANNLLEDQSQ+ESG L +++SG  GTFVGIYDGHGGP
Sbjct: 32   DGLLWYKDTGQHVNGEFSMAVVQANNLLEDQSQLESGSLSTLDSGPYGTFVGIYDGHGGP 91

Query: 2108 EAARFINDHLFNNLKKSTSNHRNMSVDVIREAYSATEEEFLCLVQKEWLIKPQMASVGSC 2287
            E +R+INDHLF +LK+ TS H++MSVDVI++A+ ATEE FL LV K+W +KPQ+A+VGSC
Sbjct: 92   ETSRYINDHLFQHLKRFTSEHQSMSVDVIKKAFQATEEGFLSLVTKQWPMKPQIAAVGSC 151

Query: 2288 CLVGILCAGTLYIANVGNSRVVLGRSEKASMDVTAIQLSTEHDASIESIREELRSLHPHD 2467
            CLVGI+C G LYIAN+G+SR VLGR  KA+ +V AIQLS EH+ SIES+R+E+ S+HP D
Sbjct: 152  CLVGIICGGILYIANLGDSRAVLGRLVKATGEVLAIQLSAEHNVSIESVRQEMHSMHPDD 211

Query: 2468 SQIVVLTRRVWRVKGIIKISRSIGDAYLKRAEFNREPLY 2584
            SQIVVL   VWRVKG+I++SRSIGD YLK+AEFNREPLY
Sbjct: 212  SQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLY 250


>ref|XP_002281610.1| PREDICTED: probable protein phosphatase 2C 38 [Vitis vinifera]
            gi|297736452|emb|CBI25323.3| unnamed protein product
            [Vitis vinifera]
          Length = 385

 Score =  319 bits (818), Expect = 2e-84
 Identities = 159/249 (63%), Positives = 195/249 (78%), Gaps = 1/249 (0%)
 Frame = +2

Query: 1838 VSSGIKKKIIPCCMLA-EXXXXXXXXXXXXVDKLLWSMDLGHHFNGEFSMAVTQANNLLE 2014
            VS+ + + + PC   + E            VD LLW  D G H NG+FSMAV QANN+LE
Sbjct: 2    VSNSLMRIVAPCWRPSIEGENSGRGDVAGRVDGLLWYKDSGRHVNGDFSMAVIQANNVLE 61

Query: 2015 DQSQVESGPLGSMNSGLRGTFVGIYDGHGGPEAARFINDHLFNNLKKSTSNHRNMSVDVI 2194
            D S+++SGPL S++SG +GTFVGIYDGHGGPEA+RF+N  LF+NLKK TS ++ MS DVI
Sbjct: 62   DHSRLDSGPLSSLDSGPQGTFVGIYDGHGGPEASRFVNSRLFDNLKKFTSENQGMSEDVI 121

Query: 2195 REAYSATEEEFLCLVQKEWLIKPQMASVGSCCLVGILCAGTLYIANVGNSRVVLGRSEKA 2374
             +A+ ATE+EFL LV+K+WL KPQ+AS GSCCLVGI+C+G LYIAN G+SRVVLGR EKA
Sbjct: 122  TKAFLATEDEFLSLVKKQWLSKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGRLEKA 181

Query: 2375 SMDVTAIQLSTEHDASIESIREELRSLHPHDSQIVVLTRRVWRVKGIIKISRSIGDAYLK 2554
              +V A+QLS+EH+A+ ES+REELR LHP D QIVVL  +VWRVKGII++SRSIGDAYLK
Sbjct: 182  FSEVKAVQLSSEHNANFESVREELRMLHPDDPQIVVLKHKVWRVKGIIQVSRSIGDAYLK 241

Query: 2555 RAEFNREPL 2581
             AEFNREPL
Sbjct: 242  NAEFNREPL 250



 Score = 60.1 bits (144), Expect = 3e-06
 Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
 Frame = +2

Query: 1019 VSTGVKKMSIPCWKPAVEGEEGNLKSTYDIGQVDGQLCHKDLGHDNKVESSMTVTRANN- 1195
            VS  + ++  PCW+P++EGE          G+VDG L +KD G     + SM V +ANN 
Sbjct: 2    VSNSLMRIVAPCWRPSIEGENSGRGDV--AGRVDGLLWYKDSGRHVNGDFSMAVIQANNV 59

Query: 1196 LEDQSQVESGPLS 1234
            LED S+++SGPLS
Sbjct: 60   LEDHSRLDSGPLS 72


>ref|XP_002327730.1| predicted protein [Populus trichocarpa] gi|118486583|gb|ABK95130.1|
            unknown [Populus trichocarpa] gi|222836815|gb|EEE75208.1|
            predicted protein [Populus trichocarpa]
          Length = 397

 Score =  318 bits (815), Expect = 5e-84
 Identities = 152/219 (69%), Positives = 183/219 (83%)
 Frame = +2

Query: 1928 DKLLWSMDLGHHFNGEFSMAVTQANNLLEDQSQVESGPLGSMNSGLRGTFVGIYDGHGGP 2107
            D LLW  D G H NGEFSMAV QANNLLEDQSQ+ESGPL +++SG  GTFVGIYDGHGGP
Sbjct: 32   DGLLWYKDTGQHMNGEFSMAVVQANNLLEDQSQIESGPLSTLDSGPYGTFVGIYDGHGGP 91

Query: 2108 EAARFINDHLFNNLKKSTSNHRNMSVDVIREAYSATEEEFLCLVQKEWLIKPQMASVGSC 2287
            E +R++NDHLF +LK+ TS  ++MSVDVIR+AY ATEE FL LV K+W +KPQ+A+VGSC
Sbjct: 92   ETSRYVNDHLFQHLKRFTSEQQSMSVDVIRKAYQATEEGFLSLVTKQWPMKPQIAAVGSC 151

Query: 2288 CLVGILCAGTLYIANVGNSRVVLGRSEKASMDVTAIQLSTEHDASIESIREELRSLHPHD 2467
            CLV ++C G LYIAN+G+SR VLGR  KA+ +V AIQLS+EH+ +IES+R+E+ SLHP D
Sbjct: 152  CLVAVICGGILYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVAIESVRQEMHSLHPDD 211

Query: 2468 SQIVVLTRRVWRVKGIIKISRSIGDAYLKRAEFNREPLY 2584
            SQIVVL   VWRVKG+I+ISRSIGD YLK+AEFNR PLY
Sbjct: 212  SQIVVLKHNVWRVKGLIQISRSIGDVYLKKAEFNRAPLY 250


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