BLASTX nr result

ID: Coptis24_contig00012531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012531
         (1333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73850.1| hypothetical protein VITISV_021777 [Vitis vinifera]   154   6e-35
ref|XP_002264376.1| PREDICTED: PRA1 family protein E [Vitis vini...   152   1e-34
ref|XP_002307629.1| predicted protein [Populus trichocarpa] gi|2...   149   1e-33
ref|XP_002531279.1| Prenylated Rab acceptor protein, putative [R...   146   1e-32
ref|XP_002300800.1| predicted protein [Populus trichocarpa] gi|2...   144   7e-32

>emb|CAN73850.1| hypothetical protein VITISV_021777 [Vitis vinifera]
          Length = 206

 Score =  154 bits (388), Expect = 6e-35
 Identities = 70/159 (44%), Positives = 96/159 (60%)
 Frame = +3

Query: 216 YEFLTRAKERGQTILTTRKPWRELTDPTSFSRPYTFNEALVRLKRNLNYFRVNYTXXXXX 395
           + F++RA +R QT++ TR+PWRE  D ++ SRP+ +++A+ R+KRN+NYFRVNY      
Sbjct: 28  FTFISRATQRTQTLMATRRPWREFLDYSALSRPHNYSDAMARIKRNVNYFRVNYAMVMLF 87

Query: 396 XXXXXXXWHPVSMIVFLVVFIGWFFLYFFRDEPIXXXXXXXXXXXXLFILSLVTIVALLF 575
                  WHP SMIVFL++F+ WFFLYFFRD P+            L +L L+T+VAL+F
Sbjct: 88  ILFVSLLWHPTSMIVFLIIFVAWFFLYFFRDNPVVLFHQTIDDRVVLVLLGLITVVALVF 147

Query: 576 THXXXXXXXXXXXXXXXXXXHGCFRGVDDLFLDENEVAE 692
           T                   H  FRG +DLFL+E EVAE
Sbjct: 148 TDVGLNVLVSLIIGVAVVGLHAAFRGTEDLFLNEEEVAE 186


>ref|XP_002264376.1| PREDICTED: PRA1 family protein E [Vitis vinifera]
          Length = 206

 Score =  152 bits (385), Expect = 1e-34
 Identities = 70/159 (44%), Positives = 95/159 (59%)
 Frame = +3

Query: 216 YEFLTRAKERGQTILTTRKPWRELTDPTSFSRPYTFNEALVRLKRNLNYFRVNYTXXXXX 395
           + F++RA +R QT++ TR+PWRE  D +  SRP+ +++A+ R+KRN+NYFRVNY      
Sbjct: 28  FTFISRATQRTQTLMATRRPWREFLDYSVLSRPHNYSDAMARIKRNVNYFRVNYAMVMLF 87

Query: 396 XXXXXXXWHPVSMIVFLVVFIGWFFLYFFRDEPIXXXXXXXXXXXXLFILSLVTIVALLF 575
                  WHP SMIVFL++F+ WFFLYFFRD P+            L +L L+T+VAL+F
Sbjct: 88  ILFVSLLWHPTSMIVFLIIFVAWFFLYFFRDNPVVLFHQTIDDRVVLVLLGLITVVALVF 147

Query: 576 THXXXXXXXXXXXXXXXXXXHGCFRGVDDLFLDENEVAE 692
           T                   H  FRG +DLFL+E EVAE
Sbjct: 148 TDVGLNVLVSLIIGVAVVGLHAAFRGTEDLFLNEEEVAE 186


>ref|XP_002307629.1| predicted protein [Populus trichocarpa] gi|222857078|gb|EEE94625.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score =  149 bits (377), Expect = 1e-33
 Identities = 72/157 (45%), Positives = 95/157 (60%)
 Frame = +3

Query: 222 FLTRAKERGQTILTTRKPWRELTDPTSFSRPYTFNEALVRLKRNLNYFRVNYTXXXXXXX 401
           FLTR+         TR+PWREL + +SF+RP +F EA +R+KRNL YFRVNYT       
Sbjct: 27  FLTRSANTTTNFFATRRPWRELIEFSSFTRPLSFGEATIRVKRNLYYFRVNYTMIILVIL 86

Query: 402 XXXXXWHPVSMIVFLVVFIGWFFLYFFRDEPIXXXXXXXXXXXXLFILSLVTIVALLFTH 581
                WHP+SMIVFLVVF+ WFFLYFFRD+P+            L +LS+VTI+AL+FTH
Sbjct: 87  FLSLLWHPLSMIVFLVVFVAWFFLYFFRDQPLVIFHRPIDDRVVLGLLSIVTIIALIFTH 146

Query: 582 XXXXXXXXXXXXXXXXXXHGCFRGVDDLFLDENEVAE 692
                             H  FRG ++L+LDE+++A+
Sbjct: 147 VWLNVLVSVLIGAAVVVLHAAFRGTENLYLDEHDLAD 183


>ref|XP_002531279.1| Prenylated Rab acceptor protein, putative [Ricinus communis]
           gi|223529112|gb|EEF31092.1| Prenylated Rab acceptor
           protein, putative [Ricinus communis]
          Length = 216

 Score =  146 bits (369), Expect = 1e-32
 Identities = 73/157 (46%), Positives = 91/157 (57%)
 Frame = +3

Query: 222 FLTRAKERGQTILTTRKPWRELTDPTSFSRPYTFNEALVRLKRNLNYFRVNYTXXXXXXX 401
           F++RA    Q+++ TR+PW+EL +P+SFS P  ++EA+ R+K N+NYFRVNY        
Sbjct: 38  FISRATSATQSVIATRRPWKELLNPSSFSCPCNYSEAMSRVKYNVNYFRVNYAMVVLSVL 97

Query: 402 XXXXXWHPVSMIVFLVVFIGWFFLYFFRDEPIXXXXXXXXXXXXLFILSLVTIVALLFTH 581
                WHPVSMIVF+VVFI WFFLYF RD PI            L +L LVTIVAL+ TH
Sbjct: 98  FLSLLWHPVSMIVFIVVFIAWFFLYFSRDGPIVLFNREFDDRVVLVVLGLVTIVALVLTH 157

Query: 582 XXXXXXXXXXXXXXXXXXHGCFRGVDDLFLDENEVAE 692
                             HG FR  +DLFLDE   AE
Sbjct: 158 VGLNVLVALMIGAVVVGIHGAFRNTEDLFLDEESAAE 194


>ref|XP_002300800.1| predicted protein [Populus trichocarpa] gi|222842526|gb|EEE80073.1|
           predicted protein [Populus trichocarpa]
          Length = 195

 Score =  144 bits (362), Expect = 7e-32
 Identities = 69/157 (43%), Positives = 91/157 (57%)
 Frame = +3

Query: 222 FLTRAKERGQTILTTRKPWRELTDPTSFSRPYTFNEALVRLKRNLNYFRVNYTXXXXXXX 401
           FLTRA     TI  TR+PWREL + +SF+RP +  +  +R+KRNL+YFRVNYT       
Sbjct: 21  FLTRATNTTSTIFATRRPWRELIEFSSFARPGSLGDTTIRIKRNLSYFRVNYTMIILSIL 80

Query: 402 XXXXXWHPVSMIVFLVVFIGWFFLYFFRDEPIXXXXXXXXXXXXLFILSLVTIVALLFTH 581
                WHP+SMIVFL+VF+ WFFLYFFRD+P+            L +L + TIVAL+FTH
Sbjct: 81  FLSLLWHPLSMIVFLIVFVAWFFLYFFRDQPLVIFHRTIDDRVVLGLLGVATIVALIFTH 140

Query: 582 XXXXXXXXXXXXXXXXXXHGCFRGVDDLFLDENEVAE 692
                             H  FR  DD++ D+ +VA+
Sbjct: 141 VWLNVLVSLLIGAAIVVLHAAFRRTDDMYSDDQDVAD 177


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