BLASTX nr result

ID: Coptis24_contig00012530 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012530
         (659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321119.1| predicted protein [Populus trichocarpa] gi|2...   155   8e-36
emb|CBI39152.3| unnamed protein product [Vitis vinifera]              154   1e-35
ref|XP_002267730.1| PREDICTED: mitochondrial import inner membra...   153   2e-35
ref|XP_003548099.1| PREDICTED: mitochondrial import inner membra...   148   8e-34
ref|NP_001235734.1| uncharacterized protein LOC100527414 precurs...   148   8e-34

>ref|XP_002321119.1| predicted protein [Populus trichocarpa] gi|222861892|gb|EEE99434.1|
           predicted protein [Populus trichocarpa]
          Length = 116

 Score =  155 bits (391), Expect = 8e-36
 Identities = 75/114 (65%), Positives = 99/114 (86%), Gaps = 1/114 (0%)
 Frame = +3

Query: 180 MAARVLVQVLVMGSGIVGRAIFKAYQQALTNASKSGVAQETIQNTVRRGIRPMTEQEARE 359
           MA ++L  ++VMGS I+GRA  +AY+QAL NASKSGVAQET+QNT+RRG + MTEQEAR+
Sbjct: 1   MAGKILANLIVMGSAILGRAFIQAYRQALANASKSGVAQETLQNTIRRGSKVMTEQEARQ 60

Query: 360 ILGVTEGSSWQEIMQKYNTLFERNA-SGSFYLQSKIQKAKEYLEAVNVAKGQGS 518
           ILGVTE +SW+EI++KY+TLFERN+ +GSFY+QSK+ +AKE LEAV+  KG+G+
Sbjct: 61  ILGVTEETSWEEILKKYDTLFERNSKNGSFYIQSKVHRAKECLEAVHQGKGEGT 114


>emb|CBI39152.3| unnamed protein product [Vitis vinifera]
          Length = 253

 Score =  154 bits (390), Expect = 1e-35
 Identities = 77/115 (66%), Positives = 98/115 (85%), Gaps = 1/115 (0%)
 Frame = +3

Query: 177 IMAARVLVQVLVMGSGIVGRAIFKAYQQALTNASKSGVAQETIQNTVRRGIRPMTEQEAR 356
           + A+++L  ++VMGSGI+ RA+ +AY+QAL NASKSGVAQETIQNTVRRG + M EQEAR
Sbjct: 137 VQASKILANLIVMGSGILARALVQAYRQALANASKSGVAQETIQNTVRRGSKAMMEQEAR 196

Query: 357 EILGVTEGSSWQEIMQKYNTLFERNA-SGSFYLQSKIQKAKEYLEAVNVAKGQGS 518
           +ILGVTE S+W+EI+QKY+TLFERNA +GSFYLQSK+ +AKE LEAV+    QG+
Sbjct: 197 QILGVTEQSTWEEILQKYDTLFERNAKNGSFYLQSKVHRAKECLEAVHQGNSQGT 251


>ref|XP_002267730.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           tim16-like [Vitis vinifera]
          Length = 120

 Score =  153 bits (387), Expect = 2e-35
 Identities = 77/113 (68%), Positives = 97/113 (85%), Gaps = 1/113 (0%)
 Frame = +3

Query: 183 AARVLVQVLVMGSGIVGRAIFKAYQQALTNASKSGVAQETIQNTVRRGIRPMTEQEAREI 362
           A+++L  ++VMGSGI+ RA+ +AY+QAL NASKSGVAQETIQNTVRRG + M EQEAR+I
Sbjct: 6   ASKILANLIVMGSGILARALVQAYRQALANASKSGVAQETIQNTVRRGSKAMMEQEARQI 65

Query: 363 LGVTEGSSWQEIMQKYNTLFERNA-SGSFYLQSKIQKAKEYLEAVNVAKGQGS 518
           LGVTE S+W+EI+QKY+TLFERNA +GSFYLQSK+ +AKE LEAV+    QG+
Sbjct: 66  LGVTEQSTWEEILQKYDTLFERNAKNGSFYLQSKVHRAKECLEAVHQGNSQGT 118


>ref|XP_003548099.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           tim-16-like [Glycine max]
          Length = 116

 Score =  148 bits (374), Expect = 8e-34
 Identities = 74/114 (64%), Positives = 94/114 (82%), Gaps = 1/114 (0%)
 Frame = +3

Query: 180 MAARVLVQVLVMGSGIVGRAIFKAYQQALTNASKSGVAQETIQNTVRRGIRPMTEQEARE 359
           MAA++L  ++VMG GI+ RA+ +AY+QALTNASK+GVAQETIQNT+RR  + MTEQEAR 
Sbjct: 1   MAAKILANLIVMGGGILARAVVQAYRQALTNASKNGVAQETIQNTIRRASKVMTEQEARR 60

Query: 360 ILGVTEGSSWQEIMQKYNTLFERNA-SGSFYLQSKIQKAKEYLEAVNVAKGQGS 518
           ILGVTE + W+EI++KY+ LFE NA +GSFYLQSK+ +AKE LEAV   K QG+
Sbjct: 61  ILGVTEETPWEEIIKKYDNLFENNAKNGSFYLQSKVHRAKECLEAVQQGKSQGT 114


>ref|NP_001235734.1| uncharacterized protein LOC100527414 precursor [Glycine max]
           gi|255632292|gb|ACU16504.1| unknown [Glycine max]
          Length = 116

 Score =  148 bits (374), Expect = 8e-34
 Identities = 74/114 (64%), Positives = 95/114 (83%), Gaps = 1/114 (0%)
 Frame = +3

Query: 180 MAARVLVQVLVMGSGIVGRAIFKAYQQALTNASKSGVAQETIQNTVRRGIRPMTEQEARE 359
           MAA++L  ++VMG GI+ RA+ +AY+QALTNASK+GVAQETIQNT+RR  + MTEQEAR+
Sbjct: 1   MAAKILANLIVMGGGILARAVVQAYRQALTNASKNGVAQETIQNTMRRASKVMTEQEARQ 60

Query: 360 ILGVTEGSSWQEIMQKYNTLFERNA-SGSFYLQSKIQKAKEYLEAVNVAKGQGS 518
           ILGVTE + W+EI++KY+ LFE NA +GSFYLQSK+ +AKE LEAV   K QG+
Sbjct: 61  ILGVTEETPWEEIIKKYDNLFENNAKNGSFYLQSKVHRAKECLEAVQQGKSQGT 114


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