BLASTX nr result

ID: Coptis24_contig00012526 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012526
         (949 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235713.1| uncharacterized protein LOC100305973 [Glycin...   350   3e-94
ref|XP_002302753.1| predicted protein [Populus trichocarpa] gi|1...   344   2e-92
ref|XP_002275502.1| PREDICTED: transmembrane protein 205 [Vitis ...   342   8e-92
ref|XP_002515303.1| conserved hypothetical protein [Ricinus comm...   335   1e-89
ref|XP_004163148.1| PREDICTED: transmembrane protein 205-like is...   332   1e-88

>ref|NP_001235713.1| uncharacterized protein LOC100305973 [Glycine max]
           gi|255627153|gb|ACU13921.1| unknown [Glycine max]
          Length = 208

 Score =  350 bits (898), Expect = 3e-94
 Identities = 167/211 (79%), Positives = 185/211 (87%)
 Frame = +1

Query: 73  MGWITRFLTAIAFLAFGILFSPETFGXXXXXXXXXXXXXXXXXXXCFSTAWGAALWVTFI 252
           MGW++RF+TA+AFLA G++FSPET G                   CFSTA+GAALWVTFI
Sbjct: 1   MGWLSRFITAVAFLAIGVIFSPETLGSKSTTLSTYLKLAHLL---CFSTAFGAALWVTFI 57

Query: 253 GGIIMFKNLPRHQFGNLQSKMFPAYFSMVGICCAISVACFGYVHPWRSSSSTEKYQLGFL 432
           GGIIMFKNLPRHQFGNLQSKMFPAYFSMVG+CCA+SVA FGY+HPW++SS+TE+YQLGFL
Sbjct: 58  GGIIMFKNLPRHQFGNLQSKMFPAYFSMVGVCCAVSVASFGYLHPWKTSSTTERYQLGFL 117

Query: 433 LSAFAFNLTNLFVFTPMTIEMMKQRHKIEKEENIGEEVGWTKNKETAKKNPKLAAMNKKF 612
           LS+FAFNLTNLFVFTPMTIEMMKQRHK+E+E NIGEEVGW+KN E AK NPKLAAMNKKF
Sbjct: 118 LSSFAFNLTNLFVFTPMTIEMMKQRHKVERENNIGEEVGWSKNVEVAKSNPKLAAMNKKF 177

Query: 613 GMIHGLSSLANIMSFGSLAIHSWYLAGKIDL 705
           GMIHGLSSLANIMSFGSLAIHSWYLAGKIDL
Sbjct: 178 GMIHGLSSLANIMSFGSLAIHSWYLAGKIDL 208


>ref|XP_002302753.1| predicted protein [Populus trichocarpa] gi|118484919|gb|ABK94325.1|
           unknown [Populus trichocarpa]
           gi|222844479|gb|EEE82026.1| predicted protein [Populus
           trichocarpa]
          Length = 209

 Score =  344 bits (882), Expect = 2e-92
 Identities = 165/211 (78%), Positives = 183/211 (86%)
 Frame = +1

Query: 73  MGWITRFLTAIAFLAFGILFSPETFGXXXXXXXXXXXXXXXXXXXCFSTAWGAALWVTFI 252
           MGW++RFL AIAF A G+LFSPETFG                   CFSTA+G+ALWVTFI
Sbjct: 1   MGWLSRFLAAIAFFAIGVLFSPETFGSKSVTHLSAYLKLAHLL--CFSTAFGSALWVTFI 58

Query: 253 GGIIMFKNLPRHQFGNLQSKMFPAYFSMVGICCAISVACFGYVHPWRSSSSTEKYQLGFL 432
           GGIIMFKNLPRHQFGNLQSKMFPAYF +VG+CCAISVA FGY+HPW+S+S+ EKYQLGFL
Sbjct: 59  GGIIMFKNLPRHQFGNLQSKMFPAYFLLVGVCCAISVAAFGYLHPWKSASTAEKYQLGFL 118

Query: 433 LSAFAFNLTNLFVFTPMTIEMMKQRHKIEKEENIGEEVGWTKNKETAKKNPKLAAMNKKF 612
           LS+FAFNLTNLFVFTPMTIEMMKQRHK+E+EENIG EVGW+KN+E AK NPKLAAMNKKF
Sbjct: 119 LSSFAFNLTNLFVFTPMTIEMMKQRHKVEREENIGTEVGWSKNREVAKANPKLAAMNKKF 178

Query: 613 GMIHGLSSLANIMSFGSLAIHSWYLAGKIDL 705
           GMIHGLSSLANIMSFGSLA+HSWYLAGKI+L
Sbjct: 179 GMIHGLSSLANIMSFGSLAMHSWYLAGKINL 209


>ref|XP_002275502.1| PREDICTED: transmembrane protein 205 [Vitis vinifera]
           gi|147788962|emb|CAN73725.1| hypothetical protein
           VITISV_016653 [Vitis vinifera]
           gi|297743961|emb|CBI36931.3| unnamed protein product
           [Vitis vinifera]
          Length = 213

 Score =  342 bits (877), Expect = 8e-92
 Identities = 164/213 (76%), Positives = 181/213 (84%), Gaps = 2/213 (0%)
 Frame = +1

Query: 73  MGWITRFLTAIAFLAFGILFSPETFGXXXXXXXXXXXXXXXXXXX--CFSTAWGAALWVT 246
           MGW+TRFL A+ FLA G++FSPETFG                     CF+TAWGAALWVT
Sbjct: 1   MGWLTRFLGAVTFLAVGVIFSPETFGSKSDGSHSSKLTAALKLAHLLCFATAWGAALWVT 60

Query: 247 FIGGIIMFKNLPRHQFGNLQSKMFPAYFSMVGICCAISVACFGYVHPWRSSSSTEKYQLG 426
           FIGGIIMFKNLPRH FGNLQSKMFPAYFSMVG+CCA+S A FGY+HPW+SSS+ EKYQLG
Sbjct: 61  FIGGIIMFKNLPRHTFGNLQSKMFPAYFSMVGVCCAVSTASFGYLHPWKSSSTAEKYQLG 120

Query: 427 FLLSAFAFNLTNLFVFTPMTIEMMKQRHKIEKEENIGEEVGWTKNKETAKKNPKLAAMNK 606
           FLLSAFAFNLTNL VFTPMTIEMMKQRHK+E+E+NIGEE+G +KNKE AK NPKLAAMNK
Sbjct: 121 FLLSAFAFNLTNLLVFTPMTIEMMKQRHKVEREQNIGEEIGRSKNKEVAKVNPKLAAMNK 180

Query: 607 KFGMIHGLSSLANIMSFGSLAIHSWYLAGKIDL 705
           KFGMIHGLSSLANIMSFGSLA+HSWYLAGK+DL
Sbjct: 181 KFGMIHGLSSLANIMSFGSLAMHSWYLAGKMDL 213


>ref|XP_002515303.1| conserved hypothetical protein [Ricinus communis]
           gi|223545783|gb|EEF47287.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 209

 Score =  335 bits (858), Expect = 1e-89
 Identities = 160/211 (75%), Positives = 180/211 (85%)
 Frame = +1

Query: 73  MGWITRFLTAIAFLAFGILFSPETFGXXXXXXXXXXXXXXXXXXXCFSTAWGAALWVTFI 252
           MGW+TRF+ A+AFLA GI+FSPETFG                   CFSTA+GAALWVTFI
Sbjct: 1   MGWLTRFVAAVAFLAIGIIFSPETFGSKSVGQLSTYLKLAHLL--CFSTAFGAALWVTFI 58

Query: 253 GGIIMFKNLPRHQFGNLQSKMFPAYFSMVGICCAISVACFGYVHPWRSSSSTEKYQLGFL 432
           GGIIMFKNLPRHQFGNLQSKMFPAYF +VG+CCAI VA FGY+HPW+S+S+ EKYQLGFL
Sbjct: 59  GGIIMFKNLPRHQFGNLQSKMFPAYFWLVGVCCAICVASFGYLHPWKSASTAEKYQLGFL 118

Query: 433 LSAFAFNLTNLFVFTPMTIEMMKQRHKIEKEENIGEEVGWTKNKETAKKNPKLAAMNKKF 612
           LS+ AFNL NLFVFTPMTIEMMKQRHK+E+E+NIGEEVGW+KN+E AK NPKLAAMNKK 
Sbjct: 119 LSSLAFNLANLFVFTPMTIEMMKQRHKVEREQNIGEEVGWSKNQEIAKTNPKLAAMNKKL 178

Query: 613 GMIHGLSSLANIMSFGSLAIHSWYLAGKIDL 705
           GMIHG SSLANIMSFGSLA+HSWYLAGK++L
Sbjct: 179 GMIHGFSSLANIMSFGSLAMHSWYLAGKMNL 209


>ref|XP_004163148.1| PREDICTED: transmembrane protein 205-like isoform 1 [Cucumis
           sativus]
          Length = 213

 Score =  332 bits (850), Expect = 1e-88
 Identities = 157/213 (73%), Positives = 179/213 (84%), Gaps = 2/213 (0%)
 Frame = +1

Query: 73  MGWITRFLTAIAFLAFGILFSPETFGXXXXXXXXXXXXXXXXXXXC--FSTAWGAALWVT 246
           M W+TRFLTA+ FLA G++FSPETFG                      +STAWGA+LWVT
Sbjct: 1   MAWLTRFLTAVVFLAIGVVFSPETFGSNSKTFNAPKLSMYLKLAHLLSYSTAWGASLWVT 60

Query: 247 FIGGIIMFKNLPRHQFGNLQSKMFPAYFSMVGICCAISVACFGYVHPWRSSSSTEKYQLG 426
           FIGGIIMFKNLPRHQFGNLQSKMFPAYFSMVGICCA SVA F Y+HPW+S+ ++E+YQLG
Sbjct: 61  FIGGIIMFKNLPRHQFGNLQSKMFPAYFSMVGICCATSVAAFAYLHPWKSAETSERYQLG 120

Query: 427 FLLSAFAFNLTNLFVFTPMTIEMMKQRHKIEKEENIGEEVGWTKNKETAKKNPKLAAMNK 606
           FL+SAFAFNL NLFVFTPMTIE+MKQRHK+E+E NIGEEVGW+KN E AK NPKLAAMNK
Sbjct: 121 FLISAFAFNLANLFVFTPMTIELMKQRHKVERESNIGEEVGWSKNVEVAKVNPKLAAMNK 180

Query: 607 KFGMIHGLSSLANIMSFGSLAIHSWYLAGKIDL 705
           KFGMIHGLSSLANI++FGSLA+HSWYLAGK++L
Sbjct: 181 KFGMIHGLSSLANILAFGSLAMHSWYLAGKLNL 213


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