BLASTX nr result

ID: Coptis24_contig00012525 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012525
         (999 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526190.1| ATP binding protein, putative [Ricinus commu...   343   5e-92
ref|XP_002333388.1| predicted protein [Populus trichocarpa] gi|2...   339   7e-91
ref|XP_002267012.2| PREDICTED: uncharacterized protein LOC100267...   338   9e-91
emb|CBI22564.3| unnamed protein product [Vitis vinifera]              338   9e-91
ref|XP_002327574.1| predicted protein [Populus trichocarpa] gi|2...   330   2e-88

>ref|XP_002526190.1| ATP binding protein, putative [Ricinus communis]
            gi|223534494|gb|EEF36194.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 782

 Score =  343 bits (879), Expect = 5e-92
 Identities = 170/313 (54%), Positives = 223/313 (71%), Gaps = 1/313 (0%)
 Frame = +3

Query: 3    ISVGVISPYKAQVFALQEKIGN-RFGGQSNFSVRVRSVDGFQGGEEDVIIISTVRSNRNG 179
            +S+G+ISPYKAQV A+QEKIGN   G  + FSV VRS+DGFQGGEEDVII STVR N  G
Sbjct: 453  VSIGIISPYKAQVHAIQEKIGNYSSGSDAEFSVNVRSIDGFQGGEEDVIIFSTVRCNNKG 512

Query: 180  SVGFLSNCQRTNVALTRARYCLWILGNAPTLLNSGSVWKKLVLNAKDRGCYFNVDEDETL 359
            SVGFLSNCQR NVALTRARYCLWILGNA TL  SGS+WKKLV +A+ R C+ N DED  L
Sbjct: 513  SVGFLSNCQRANVALTRARYCLWILGNAATLNKSGSIWKKLVADAERRRCFHNADEDNRL 572

Query: 360  SKMLLDSMVDIDELDDLLNKNNILFRTARWKVMFSDEFWKSLGRIKNVETRKEVACLLMK 539
            ++ ++ +++++D+LD LL   + LFR ARWKV FSD+F +S+ R+K+VE RK+V  LL K
Sbjct: 573  AQAIIAALIELDQLDTLLQATSPLFRKARWKVFFSDDFQRSMERLKDVEIRKKVISLLEK 632

Query: 540  LSSGWRHPQQRKRTLTVMDRASSQLLEQYKVHGLLNLLWTVDVMMQGSTIIQVLMFWDIL 719
            LS+GWR    +     V D  S QLL+QYKV+  LN++W+VD++ + S  IQVL  WD+L
Sbjct: 633  LSNGWRQ-SDKDNDQIVHDGISFQLLQQYKVNEQLNIVWSVDILQENSFQIQVLKIWDVL 691

Query: 720  PSSEIPKLAKCLDIIFGRYTVEKWNCCRFKCIEGKLEIPMSWDIIPDAVKLDNIHNIERD 899
             SS + KLA+ LD +F +YT++K NCC++KC E  L +PM W +    V   +       
Sbjct: 692  SSSHVAKLAESLDNLFRKYTIDKINCCKYKCFERNLVVPMRWPVNSSNVHRGSTSGTNLL 751

Query: 900  QLSTEFASLRMKE 938
            QLS   A+L +++
Sbjct: 752  QLSESLAALSLRD 764


>ref|XP_002333388.1| predicted protein [Populus trichocarpa] gi|222836389|gb|EEE74796.1|
            predicted protein [Populus trichocarpa]
          Length = 1087

 Score =  339 bits (869), Expect = 7e-91
 Identities = 173/324 (53%), Positives = 228/324 (70%), Gaps = 2/324 (0%)
 Frame = +3

Query: 3    ISVGVISPYKAQVFALQEKIGNRFG-GQSNFSVRVRSVDGFQGGEEDVIIISTVRSNRNG 179
            +S+G+ISPY+AQV A+QEKIG       S FSV V +VDGFQGGEED+IIISTVRSN NG
Sbjct: 740  VSIGIISPYQAQVHAIQEKIGKFISDSDSAFSVSVGTVDGFQGGEEDLIIISTVRSNENG 799

Query: 180  SVGFLSNCQRTNVALTRARYCLWILGNAPTLLNSGSVWKKLVLNAKDRGCYFNVDEDETL 359
            SVGF+SN QR NVALTRAR+CLWILGN  TL+ SGS+WKK+V +AK R C++N +EDE+L
Sbjct: 800  SVGFVSNPQRANVALTRARFCLWILGNEATLVRSGSIWKKIVNDAKHRQCFYNAEEDESL 859

Query: 360  SKMLLDSMVDIDELDDLLNKNNILFRTARWKVMFSDEFWKSLGRIKNVETRKEVACLLMK 539
             + + +S+++   LD LL  ++ LFR ARW V FSD+F +S+ R+KNV   KEV  LL K
Sbjct: 860  DQAITESLIEHGRLDVLLRTHSPLFRNARWMVFFSDDFRRSVARVKNVRICKEVLSLLAK 919

Query: 540  LSSGWRHPQQR-KRTLTVMDRASSQLLEQYKVHGLLNLLWTVDVMMQGSTIIQVLMFWDI 716
            LS+GWR  Q R KR+L V    SS L+EQY V G LN++WTVD++ + S  I VL  WDI
Sbjct: 920  LSNGWRQRQSRKKRSLMVPSGISSPLIEQYNVSGQLNMVWTVDILQENSFWIHVLKVWDI 979

Query: 717  LPSSEIPKLAKCLDIIFGRYTVEKWNCCRFKCIEGKLEIPMSWDIIPDAVKLDNIHNIER 896
            LPSS+IPKLA  LD +F  YT E+ N C +KC+EG L +PM W +   + +  +  + + 
Sbjct: 980  LPSSDIPKLAMSLDTLFWNYTEEQMNRCLYKCMEGNLVVPMRWTVDSCSDRQGSCGDADA 1039

Query: 897  DQLSTEFASLRMKEDPRRPARGSR 968
             QL    ASL ++++P    + +R
Sbjct: 1040 VQLPKSLASLCLEDEPGTTGKAAR 1063


>ref|XP_002267012.2| PREDICTED: uncharacterized protein LOC100267290 [Vitis vinifera]
          Length = 1115

 Score =  338 bits (868), Expect = 9e-91
 Identities = 177/316 (56%), Positives = 220/316 (69%), Gaps = 3/316 (0%)
 Frame = +3

Query: 3    ISVGVISPYKAQVFALQEKIGNRFGGQ--SNFSVRVRSVDGFQGGEEDVIIISTVRSNRN 176
            +SVGVISPY AQVFA+QEK+G  +     S+FSV VRSVDGFQGGEEDVIIISTVRSN N
Sbjct: 799  VSVGVISPYNAQVFAIQEKLGKTYSTSTHSDFSVSVRSVDGFQGGEEDVIIISTVRSNLN 858

Query: 177  GSVGFLSNCQRTNVALTRARYCLWILGNAPTLLNSGSVWKKLVLNAKDRGCYFNVDEDET 356
            G VGFLSN QR NVALTRAR+CLWILGN PTL NSG++W KLV NAK RGC++N ++D+ 
Sbjct: 859  GKVGFLSNRQRANVALTRARHCLWILGNGPTLANSGTIWTKLVSNAKARGCFYNAEDDKN 918

Query: 357  LSKMLLDSMVDIDELDDLLNKNNILFRTARWKVMFSDEFWKSLGRIKNVETRKEVACLLM 536
            L++ +  S+V+      L N +++LFR ARWKV FSD+FWKSL +IK  E  KEV  LL 
Sbjct: 919  LAQAIATSLVEHGYFHLLQNMDSLLFREARWKVCFSDDFWKSLAKIKRTEINKEVLRLLE 978

Query: 537  KLSSGWRHPQQRKRTLTVMDRASSQLLEQYKVHGLLNLLWTVDVMMQGSTIIQVLMFWDI 716
            KLSSGWR P   K     +    S+L +QYKV+GLL+L+WT D+  + S   QVL  WDI
Sbjct: 979  KLSSGWRSPNNEK-IPNAITGTCSELFQQYKVNGLLDLVWTTDIFKENSNCTQVLKVWDI 1037

Query: 717  LPSSEIPKLAKCLDIIFGRYTVEKWNCCRFKCIEGKLEIPMSW-DIIPDAVKLDNIHNIE 893
            LP SE  KLA+ L+ + G YTV   N C+ KCIEG LE+PM W   + D  K   + +  
Sbjct: 1038 LPRSETSKLARRLETLLGNYTVNDMNRCKVKCIEGNLEVPMRWPGNMNDTGKSLLLGDDP 1097

Query: 894  RDQLSTEFASLRMKED 941
             + LS   ASLR+ ++
Sbjct: 1098 GELLSRSIASLRIWDE 1113


>emb|CBI22564.3| unnamed protein product [Vitis vinifera]
          Length = 944

 Score =  338 bits (868), Expect = 9e-91
 Identities = 177/316 (56%), Positives = 220/316 (69%), Gaps = 3/316 (0%)
 Frame = +3

Query: 3    ISVGVISPYKAQVFALQEKIGNRFGGQ--SNFSVRVRSVDGFQGGEEDVIIISTVRSNRN 176
            +SVGVISPY AQVFA+QEK+G  +     S+FSV VRSVDGFQGGEEDVIIISTVRSN N
Sbjct: 628  VSVGVISPYNAQVFAIQEKLGKTYSTSTHSDFSVSVRSVDGFQGGEEDVIIISTVRSNLN 687

Query: 177  GSVGFLSNCQRTNVALTRARYCLWILGNAPTLLNSGSVWKKLVLNAKDRGCYFNVDEDET 356
            G VGFLSN QR NVALTRAR+CLWILGN PTL NSG++W KLV NAK RGC++N ++D+ 
Sbjct: 688  GKVGFLSNRQRANVALTRARHCLWILGNGPTLANSGTIWTKLVSNAKARGCFYNAEDDKN 747

Query: 357  LSKMLLDSMVDIDELDDLLNKNNILFRTARWKVMFSDEFWKSLGRIKNVETRKEVACLLM 536
            L++ +  S+V+      L N +++LFR ARWKV FSD+FWKSL +IK  E  KEV  LL 
Sbjct: 748  LAQAIATSLVEHGYFHLLQNMDSLLFREARWKVCFSDDFWKSLAKIKRTEINKEVLRLLE 807

Query: 537  KLSSGWRHPQQRKRTLTVMDRASSQLLEQYKVHGLLNLLWTVDVMMQGSTIIQVLMFWDI 716
            KLSSGWR P   K     +    S+L +QYKV+GLL+L+WT D+  + S   QVL  WDI
Sbjct: 808  KLSSGWRSPNNEK-IPNAITGTCSELFQQYKVNGLLDLVWTTDIFKENSNCTQVLKVWDI 866

Query: 717  LPSSEIPKLAKCLDIIFGRYTVEKWNCCRFKCIEGKLEIPMSW-DIIPDAVKLDNIHNIE 893
            LP SE  KLA+ L+ + G YTV   N C+ KCIEG LE+PM W   + D  K   + +  
Sbjct: 867  LPRSETSKLARRLETLLGNYTVNDMNRCKVKCIEGNLEVPMRWPGNMNDTGKSLLLGDDP 926

Query: 894  RDQLSTEFASLRMKED 941
             + LS   ASLR+ ++
Sbjct: 927  GELLSRSIASLRIWDE 942


>ref|XP_002327574.1| predicted protein [Populus trichocarpa] gi|222836128|gb|EEE74549.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score =  330 bits (847), Expect = 2e-88
 Identities = 160/273 (58%), Positives = 212/273 (77%)
 Frame = +3

Query: 3   ISVGVISPYKAQVFALQEKIGNRFGGQSNFSVRVRSVDGFQGGEEDVIIISTVRSNRNGS 182
           +SVGVISPY AQV+A+QEKIG  +   S+F+V +RSVDGFQGGEEDVIIISTVR N NG 
Sbjct: 50  MSVGVISPYNAQVYAIQEKIGKTYSAHSDFAVNIRSVDGFQGGEEDVIIISTVRCNANGK 109

Query: 183 VGFLSNCQRTNVALTRARYCLWILGNAPTLLNSGSVWKKLVLNAKDRGCYFNVDEDETLS 362
           +GFL++ QR NVALTRAR+CLWILGN  TL+NS S+WKKLV +AK+RGC++NV+ED++LS
Sbjct: 110 IGFLADRQRVNVALTRARHCLWILGNGATLVNSDSIWKKLVTDAKERGCFYNVEEDKSLS 169

Query: 363 KMLLDSMVDIDELDDLLNKNNILFRTARWKVMFSDEFWKSLGRIKNVETRKEVACLLMKL 542
           K + D+ +++D+LD LLN N+ LFR ARWK  FS++F KS+ +++N E R+EV  LL KL
Sbjct: 170 KAITDAFLELDQLDALLNVNSPLFRNARWKFCFSNDFRKSILKVRN-EARQEVISLLSKL 228

Query: 543 SSGWRHPQQRKRTLTVMDRASSQLLEQYKVHGLLNLLWTVDVMMQGSTIIQVLMFWDILP 722
           SSGWR   + +R + V    SS LLE Y+V+  L+L+WTVD++ + S   Q+L  WD+LP
Sbjct: 229 SSGWRESPE-ERIIVVRHGTSSLLLEHYRVNDQLHLIWTVDIIKENSNHTQILKVWDVLP 287

Query: 723 SSEIPKLAKCLDIIFGRYTVEKWNCCRFKCIEG 821
             ++PKLA+ LD +FG YTV+K N C+ KCIEG
Sbjct: 288 LPDLPKLARHLDDVFGNYTVDKMNRCKHKCIEG 320