BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012514
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5YLB4.1|GYRB_NICBE RecName: Full=DNA gyrase subunit B, chlor...    75   5e-12
ref|XP_002522164.1| DNA gyrase subunit B, putative [Ricinus comm...    74   1e-11
emb|CBI30132.3| unnamed protein product [Vitis vinifera]               74   2e-11
ref|XP_002266668.1| PREDICTED: DNA gyrase subunit B, chloroplast...    74   2e-11
ref|XP_002307976.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11

>sp|Q5YLB4.1|GYRB_NICBE RecName: Full=DNA gyrase subunit B, chloroplastic/mitochondrial;
           Flags: Precursor gi|38017095|gb|AAR07943.1| DNA gyrase B
           subunit [Nicotiana benthamiana]
          Length = 731

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 44/71 (61%), Positives = 47/71 (66%)
 Frame = -1

Query: 214 PEVRRVVNQSVQEYLT*YLELHPDVLDLILSKSLNXXXXXXXXXXXRELVRQEXXXXXXX 35
           PEVR+VV+QSVQEYLT YLELHPDVLD ILSKSLN           RELVRQ+       
Sbjct: 437 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLNALKAALAAKRARELVRQKSVLKSSS 496

Query: 34  XXXXLADCSAT 2
               LADCSAT
Sbjct: 497 LPGKLADCSAT 507


>ref|XP_002522164.1| DNA gyrase subunit B, putative [Ricinus communis]
           gi|223538602|gb|EEF40205.1| DNA gyrase subunit B,
           putative [Ricinus communis]
          Length = 732

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 43/71 (60%), Positives = 47/71 (66%)
 Frame = -1

Query: 214 PEVRRVVNQSVQEYLT*YLELHPDVLDLILSKSLNXXXXXXXXXXXRELVRQEXXXXXXX 35
           PEVR+VV+QSVQEYLT YLELHPDVLD ILSKSLN           RELVRQ+       
Sbjct: 438 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLNALKAALAAKKARELVRQKSVLRTSS 497

Query: 34  XXXXLADCSAT 2
               LADCS+T
Sbjct: 498 LPGKLADCSST 508


>emb|CBI30132.3| unnamed protein product [Vitis vinifera]
          Length = 707

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 42/71 (59%), Positives = 48/71 (67%)
 Frame = -1

Query: 214 PEVRRVVNQSVQEYLT*YLELHPDVLDLILSKSLNXXXXXXXXXXXRELVRQEXXXXXXX 35
           PEVR+VV+Q+VQE+LT YLELHPDVLDLILSKSLN           RELVRQ+       
Sbjct: 413 PEVRKVVDQTVQEFLTEYLELHPDVLDLILSKSLNALKAALAAKRARELVRQKSVLKSSS 472

Query: 34  XXXXLADCSAT 2
               LADCS+T
Sbjct: 473 LPGKLADCSST 483


>ref|XP_002266668.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
           [Vitis vinifera]
          Length = 719

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 42/71 (59%), Positives = 48/71 (67%)
 Frame = -1

Query: 214 PEVRRVVNQSVQEYLT*YLELHPDVLDLILSKSLNXXXXXXXXXXXRELVRQEXXXXXXX 35
           PEVR+VV+Q+VQE+LT YLELHPDVLDLILSKSLN           RELVRQ+       
Sbjct: 425 PEVRKVVDQTVQEFLTEYLELHPDVLDLILSKSLNALKAALAAKRARELVRQKSVLKSSS 484

Query: 34  XXXXLADCSAT 2
               LADCS+T
Sbjct: 485 LPGKLADCSST 495


>ref|XP_002307976.1| predicted protein [Populus trichocarpa] gi|222853952|gb|EEE91499.1|
           predicted protein [Populus trichocarpa]
          Length = 653

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 43/71 (60%), Positives = 46/71 (64%)
 Frame = -1

Query: 214 PEVRRVVNQSVQEYLT*YLELHPDVLDLILSKSLNXXXXXXXXXXXRELVRQEXXXXXXX 35
           PEVR+VV QSVQEYLT YLELHPDVLD ILSKSLN           RELVRQ+       
Sbjct: 359 PEVRKVVEQSVQEYLTEYLELHPDVLDSILSKSLNALKAALAAKRARELVRQKSVLKSSS 418

Query: 34  XXXXLADCSAT 2
               LADCS+T
Sbjct: 419 LPGKLADCSST 429