BLASTX nr result
ID: Coptis24_contig00012506
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00012506
(1840 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI17600.3| unnamed protein product [Vitis vinifera] 649 0.0
ref|XP_002276037.1| PREDICTED: peptide chain release factor 2 [V... 649 0.0
ref|XP_002514811.1| peptide chain release factor, putative [Rici... 640 0.0
ref|XP_003534498.1| PREDICTED: peptide chain release factor 2-li... 632 e-178
ref|NP_001059924.1| Os07g0546600 [Oryza sativa Japonica Group] g... 630 e-178
>emb|CBI17600.3| unnamed protein product [Vitis vinifera]
Length = 451
Score = 649 bits (1674), Expect = 0.0
Identities = 339/435 (77%), Positives = 378/435 (86%), Gaps = 13/435 (2%)
Frame = +2
Query: 134 PNTSH--------HSPLCSTLI---FSTLPS-YKPCQFVNYATSGNQSSVGVSNETT-EM 274
P+TSH H PL S+L F + PS + P V +A+ +Q + V+ ET+ E
Sbjct: 16 PDTSHKPHRHPPLHLPLSSSLSHHHFLSAPSRFSP--HVLFASPESQLDMEVTTETSSEW 73
Query: 275 EMQDFYVLRKDVEMTTKRVEEIRGSAGLERLEEALSVLEKKAGDSSLWDDRAKAQETLLA 454
MQDFY LR+DVE ++R EEIR SAGL++LEE L+ LE KA DSS WDDRAKAQETLLA
Sbjct: 74 AMQDFYTLRRDVEAISERAEEIRASAGLQQLEEELAALEMKAADSSFWDDRAKAQETLLA 133
Query: 455 LTDVKDKIKLLNEFKSQLEDAETIVNLTEEMESVDTGLLEEAISTIKKLNKALDQFELTQ 634
LTDVKDKIKLL +FK+Q+EDAETIV LTEEM+S+DTGLLEEA + IK+LNKALD+FELTQ
Sbjct: 134 LTDVKDKIKLLTDFKTQVEDAETIVKLTEEMDSIDTGLLEEAANIIKELNKALDRFELTQ 193
Query: 635 LLSGPYDKEGVVISITAGAGGTDAQDWADMLLRMYTRWGEKQRYKTRVVEISMGEEAGIK 814
LLSGPYDKEG VISITAGAGGTDAQDWADMLLRMY RWGEKQRYKTRVVE SMGEEAGIK
Sbjct: 194 LLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSMGEEAGIK 253
Query: 815 SATLELDGRYAYGYLSGEKGTHRIVRQSPFNSKGLRQTSFSGVDIMPLLPEESLNVEIPE 994
SAT+EL+GRYAYGYLSGEKGTHRIVRQSPFN+KGLRQTSFSGV++MPLLPEES++VEIPE
Sbjct: 254 SATIELEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGVEVMPLLPEESMDVEIPE 313
Query: 995 EDLEISFMRAGGRGGQNVNKVETAVRMVHIPTGVTVRCTEERSQLANKTRALNRLKAKLL 1174
EDLEISF RAGG+GGQNVNKVETAVR+ HIPTGVTVRCTEERSQLANK +AL+RLKAKLL
Sbjct: 314 EDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLL 373
Query: 1175 VIAEEQRASEIKQIRGDVVKAEWGQQIRNYVFHPYKLVKDVRTGLETSDITSVMDGELES 1354
VIAEEQRASEIKQIRGD VKAEWGQQIRNYVFHPYKLVKDVRTG ETSDITSVMDGELE
Sbjct: 374 VIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGYETSDITSVMDGELEP 433
Query: 1355 FIKAYLKYKYKSMIT 1399
FIKAYLK+K+ ++
Sbjct: 434 FIKAYLKFKFSMTLS 448
>ref|XP_002276037.1| PREDICTED: peptide chain release factor 2 [Vitis vinifera]
Length = 454
Score = 649 bits (1674), Expect = 0.0
Identities = 339/435 (77%), Positives = 378/435 (86%), Gaps = 13/435 (2%)
Frame = +2
Query: 134 PNTSH--------HSPLCSTLI---FSTLPS-YKPCQFVNYATSGNQSSVGVSNETT-EM 274
P+TSH H PL S+L F + PS + P V +A+ +Q + V+ ET+ E
Sbjct: 19 PDTSHKPHRHPPLHLPLSSSLSHHHFLSAPSRFSP--HVLFASPESQLDMEVTTETSSEW 76
Query: 275 EMQDFYVLRKDVEMTTKRVEEIRGSAGLERLEEALSVLEKKAGDSSLWDDRAKAQETLLA 454
MQDFY LR+DVE ++R EEIR SAGL++LEE L+ LE KA DSS WDDRAKAQETLLA
Sbjct: 77 AMQDFYTLRRDVEAISERAEEIRASAGLQQLEEELAALEMKAADSSFWDDRAKAQETLLA 136
Query: 455 LTDVKDKIKLLNEFKSQLEDAETIVNLTEEMESVDTGLLEEAISTIKKLNKALDQFELTQ 634
LTDVKDKIKLL +FK+Q+EDAETIV LTEEM+S+DTGLLEEA + IK+LNKALD+FELTQ
Sbjct: 137 LTDVKDKIKLLTDFKTQVEDAETIVKLTEEMDSIDTGLLEEAANIIKELNKALDRFELTQ 196
Query: 635 LLSGPYDKEGVVISITAGAGGTDAQDWADMLLRMYTRWGEKQRYKTRVVEISMGEEAGIK 814
LLSGPYDKEG VISITAGAGGTDAQDWADMLLRMY RWGEKQRYKTRVVE SMGEEAGIK
Sbjct: 197 LLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSMGEEAGIK 256
Query: 815 SATLELDGRYAYGYLSGEKGTHRIVRQSPFNSKGLRQTSFSGVDIMPLLPEESLNVEIPE 994
SAT+EL+GRYAYGYLSGEKGTHRIVRQSPFN+KGLRQTSFSGV++MPLLPEES++VEIPE
Sbjct: 257 SATIELEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGVEVMPLLPEESMDVEIPE 316
Query: 995 EDLEISFMRAGGRGGQNVNKVETAVRMVHIPTGVTVRCTEERSQLANKTRALNRLKAKLL 1174
EDLEISF RAGG+GGQNVNKVETAVR+ HIPTGVTVRCTEERSQLANK +AL+RLKAKLL
Sbjct: 317 EDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLL 376
Query: 1175 VIAEEQRASEIKQIRGDVVKAEWGQQIRNYVFHPYKLVKDVRTGLETSDITSVMDGELES 1354
VIAEEQRASEIKQIRGD VKAEWGQQIRNYVFHPYKLVKDVRTG ETSDITSVMDGELE
Sbjct: 377 VIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGYETSDITSVMDGELEP 436
Query: 1355 FIKAYLKYKYKSMIT 1399
FIKAYLK+K+ ++
Sbjct: 437 FIKAYLKFKFSMTLS 451
>ref|XP_002514811.1| peptide chain release factor, putative [Ricinus communis]
gi|223545862|gb|EEF47365.1| peptide chain release factor,
putative [Ricinus communis]
Length = 458
Score = 640 bits (1650), Expect = 0.0
Identities = 331/443 (74%), Positives = 374/443 (84%), Gaps = 4/443 (0%)
Frame = +2
Query: 86 IAFNTRPRILSCYNTTPNTSHHSPLCSTLI----FSTLPSYKPCQFVNYATSGNQSSVGV 253
I+F T+ I S P P ST+I F S P V YA +Q +VGV
Sbjct: 20 ISFKTKTSIFS-----PKRPFLYPPSSTIINFSSFLYTSSRLPSSSVIYAAPDSQLNVGV 74
Query: 254 SNETTEMEMQDFYVLRKDVEMTTKRVEEIRGSAGLERLEEALSVLEKKAGDSSLWDDRAK 433
ET E MQDFY LR+DVE ++RVEEIR SAGL++LE+ ++ LE KA ++S WDDRA
Sbjct: 75 DTETREWAMQDFYSLRRDVEAASERVEEIRTSAGLQQLEQEVTNLESKAANTSFWDDRAT 134
Query: 434 AQETLLALTDVKDKIKLLNEFKSQLEDAETIVNLTEEMESVDTGLLEEAISTIKKLNKAL 613
AQETLLALTDVKDKIKLL EFK+++EDAETIV LTEEM+S+DTGLLEEA S IK+LNK+L
Sbjct: 135 AQETLLALTDVKDKIKLLTEFKTKVEDAETIVKLTEEMDSIDTGLLEEASSIIKELNKSL 194
Query: 614 DQFELTQLLSGPYDKEGVVISITAGAGGTDAQDWADMLLRMYTRWGEKQRYKTRVVEISM 793
++FELTQLLSGPYDKE VISITAGAGGTDAQDWADMLLRMY RWGEKQRYKTRVVE S
Sbjct: 195 ERFELTQLLSGPYDKESAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSP 254
Query: 794 GEEAGIKSATLELDGRYAYGYLSGEKGTHRIVRQSPFNSKGLRQTSFSGVDIMPLLPEES 973
GEEAGIKSA +E++GRYAYGYLSGEKGTHRIVRQSPFN+KGLRQTSFSG+++MPLLPEES
Sbjct: 255 GEEAGIKSAMIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGIEVMPLLPEES 314
Query: 974 LNVEIPEEDLEISFMRAGGRGGQNVNKVETAVRMVHIPTGVTVRCTEERSQLANKTRALN 1153
++VE+PEEDLEISF RAGG+GGQNVNKVETAVR+ HIPTGVTVRCTEERSQLANK +AL+
Sbjct: 315 MDVELPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALS 374
Query: 1154 RLKAKLLVIAEEQRASEIKQIRGDVVKAEWGQQIRNYVFHPYKLVKDVRTGLETSDITSV 1333
RLKAKLLVIA EQRASEIKQIRGD VKAEWGQQIRNYVFHPYKLVKDVRTG ETSD+TSV
Sbjct: 375 RLKAKLLVIAVEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGYETSDVTSV 434
Query: 1334 MDGELESFIKAYLKYKYKSMITA 1402
MDGELE+FIKAYLKYKY +++
Sbjct: 435 MDGELEAFIKAYLKYKYSMTLSS 457
>ref|XP_003534498.1| PREDICTED: peptide chain release factor 2-like [Glycine max]
Length = 456
Score = 632 bits (1630), Expect = e-178
Identities = 326/456 (71%), Positives = 376/456 (82%), Gaps = 4/456 (0%)
Frame = +2
Query: 56 LQFIPSSLHTIAFNTRPRILSCYNTTPNTSHHSPLCS--TLIFSTLPSYKPCQFVNYATS 229
++ + L TI TR L PN S H P S ST + P + +AT
Sbjct: 1 MEVVSQPLCTILTPTRKHSLLIPQQIPNPSKHFPFLSFRATTLSTSSRFSPPPLL-FATP 59
Query: 230 GNQSSVGVSNET--TEMEMQDFYVLRKDVEMTTKRVEEIRGSAGLERLEEALSVLEKKAG 403
NQ S+G T ++ +QDFY LRKDVE+ ++RV EIR S+GL+ LE+ L LE++A
Sbjct: 60 ENQLSIGEGENTDASDWALQDFYSLRKDVEIMSQRVGEIRESSGLQLLEQELGNLEEQAA 119
Query: 404 DSSLWDDRAKAQETLLALTDVKDKIKLLNEFKSQLEDAETIVNLTEEMESVDTGLLEEAI 583
DSS WD+R KAQETL L DVKDKIKLLN+FK+Q+EDAETIV+LTEEM+S+D GL EEA
Sbjct: 120 DSSFWDNRGKAQETLSTLADVKDKIKLLNDFKTQVEDAETIVSLTEEMDSIDRGLFEEAS 179
Query: 584 STIKKLNKALDQFELTQLLSGPYDKEGVVISITAGAGGTDAQDWADMLLRMYTRWGEKQR 763
+ IK+LNK++D++ELTQLLSGPYDKEG VISITAGAGGTDAQDWADMLLRMY RWGEKQ+
Sbjct: 180 NLIKELNKSIDRYELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYMRWGEKQK 239
Query: 764 YKTRVVEISMGEEAGIKSATLELDGRYAYGYLSGEKGTHRIVRQSPFNSKGLRQTSFSGV 943
YKTRVVE S GEEAGIKSAT+E++GRYAYGYLSGEKGTHRIVRQSPFN+KGLRQTSFSGV
Sbjct: 240 YKTRVVEKSPGEEAGIKSATIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGV 299
Query: 944 DIMPLLPEESLNVEIPEEDLEISFMRAGGRGGQNVNKVETAVRMVHIPTGVTVRCTEERS 1123
++MPLLP+ES+NVEIPEEDLEISF RAGG+GGQNVNKVETAVR+ HIPTGVTVRCTEERS
Sbjct: 300 EVMPLLPDESMNVEIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERS 359
Query: 1124 QLANKTRALNRLKAKLLVIAEEQRASEIKQIRGDVVKAEWGQQIRNYVFHPYKLVKDVRT 1303
QLANK RAL+RLKAKLLVIAEEQRASEIKQIRGD VKAEWGQQIRNYVFHPYKLVKDVRT
Sbjct: 360 QLANKIRALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRT 419
Query: 1304 GLETSDITSVMDGELESFIKAYLKYKYKSMITADGI 1411
G ET+DITSVMDGEL+ FIK+YLK+KY ++ G+
Sbjct: 420 GHETTDITSVMDGELDPFIKSYLKHKYNMSLSTSGV 455
>ref|NP_001059924.1| Os07g0546600 [Oryza sativa Japonica Group]
gi|33146529|dbj|BAC79675.1| putative translation
releasing factor2 [Oryza sativa Japonica Group]
gi|113611460|dbj|BAF21838.1| Os07g0546600 [Oryza sativa
Japonica Group]
Length = 460
Score = 630 bits (1626), Expect = e-178
Identities = 314/396 (79%), Positives = 353/396 (89%)
Frame = +2
Query: 227 SGNQSSVGVSNETTEMEMQDFYVLRKDVEMTTKRVEEIRGSAGLERLEEALSVLEKKAGD 406
SG+QSSV S+E TE MQDFY LRKDVE+ RV E+R SAGL++LEE ++ LEKK+ D
Sbjct: 65 SGSQSSVAESSEATEWAMQDFYALRKDVELAVARVSEVRQSAGLDQLEEEIASLEKKSAD 124
Query: 407 SSLWDDRAKAQETLLALTDVKDKIKLLNEFKSQLEDAETIVNLTEEMESVDTGLLEEAIS 586
SSLWDD +KAQE L+ALT+VKD++KLLN+ K Q+E+AETIV LTEE++S+DTGLLEEA
Sbjct: 125 SSLWDDPSKAQEILVALTEVKDRVKLLNDLKLQVEEAETIVKLTEELDSIDTGLLEEASK 184
Query: 587 TIKKLNKALDQFELTQLLSGPYDKEGVVISITAGAGGTDAQDWADMLLRMYTRWGEKQRY 766
IK LNKALD FE+TQLLSGPYDKEG VI+ITAGAGGTDAQDWADMLLRMY RWGEKQRY
Sbjct: 185 IIKALNKALDNFEMTQLLSGPYDKEGAVINITAGAGGTDAQDWADMLLRMYVRWGEKQRY 244
Query: 767 KTRVVEISMGEEAGIKSATLELDGRYAYGYLSGEKGTHRIVRQSPFNSKGLRQTSFSGVD 946
KTRVVE S GEEAGIKSAT+EL+GRYAYGYLSGEKGTHRIVRQSPFN+KGLRQTSF+GV+
Sbjct: 245 KTRVVEKSPGEEAGIKSATIELEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFAGVE 304
Query: 947 IMPLLPEESLNVEIPEEDLEISFMRAGGRGGQNVNKVETAVRMVHIPTGVTVRCTEERSQ 1126
+MPLLPEES++VEIPEEDLEISF RAGG+GGQNVNKVETAVRMVHIPTG+ VRCTEERSQ
Sbjct: 305 VMPLLPEESMDVEIPEEDLEISFTRAGGKGGQNVNKVETAVRMVHIPTGIAVRCTEERSQ 364
Query: 1127 LANKTRALNRLKAKLLVIAEEQRASEIKQIRGDVVKAEWGQQIRNYVFHPYKLVKDVRTG 1306
LANK +AL+RLKAKLLVIAEEQRASEIKQIRGD VKAEWGQQIRNYVFHPYKLVKDVRT
Sbjct: 365 LANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTA 424
Query: 1307 LETSDITSVMDGELESFIKAYLKYKYKSMITADGIK 1414
ETSDIT VMDGEL++FI+AYLKYK + +K
Sbjct: 425 CETSDITGVMDGELDTFIRAYLKYKLSAAAEEQSVK 460