BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012503
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779...   103   1e-20
ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat...   103   2e-20
ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat...   101   7e-20
ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat...   100   2e-19
emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]   100   2e-19

>ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  103 bits (257), Expect = 1e-20
 Identities = 47/117 (40%), Positives = 76/117 (64%)
 Frame = -1

Query: 354 SKRMDAAGIQPDIVTLSTLINCYSNMGRVDFGFAVLASILKRGFEPDAVXXXXXXXXXXX 175
           S R++  GIQPD++TL+ LINC+ +MG++ FGF+VLA ILKRG+ PD V           
Sbjct: 82  SHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCL 141

Query: 174 XXKVADAMDLFTRMLENGYPCNEVSYGTVMNGICKSVNSTAALQFMRAMEKKQLPPN 4
             +V  A+    ++L  G+  N+VSYGT++NG+CK  ++ AA++ ++ ++ +   PN
Sbjct: 142 KGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPN 198



 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 44/117 (37%), Positives = 74/117 (63%)
 Frame = -1

Query: 354  SKRMDAAGIQPDIVTLSTLINCYSNMGRVDFGFAVLASILKRGFEPDAVXXXXXXXXXXX 175
            S R++  GIQPD+ TL+ LINC+ +MG++ F F++LA ILKRG+ PD +           
Sbjct: 949  SHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCL 1008

Query: 174  XXKVADAMDLFTRMLENGYPCNEVSYGTVMNGICKSVNSTAALQFMRAMEKKQLPPN 4
              +V  A+    ++L  G+  N+VSYGT++NG+CK  ++ AA++ +R ++ +   P+
Sbjct: 1009 KGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPD 1065


>ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  103 bits (256), Expect = 2e-20
 Identities = 47/117 (40%), Positives = 76/117 (64%)
 Frame = -1

Query: 354 SKRMDAAGIQPDIVTLSTLINCYSNMGRVDFGFAVLASILKRGFEPDAVXXXXXXXXXXX 175
           S R++  GIQPD++TL+ LINC+ +MG++ FGF+VLA ILKRG+ PD V           
Sbjct: 82  SHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCL 141

Query: 174 XXKVADAMDLFTRMLENGYPCNEVSYGTVMNGICKSVNSTAALQFMRAMEKKQLPPN 4
             +V  A+    ++L  G+  N+VSY T++NG+CK  ++ AA++F+R ++ +   P+
Sbjct: 142 KGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPD 198


>ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  101 bits (251), Expect = 7e-20
 Identities = 46/117 (39%), Positives = 74/117 (63%)
 Frame = -1

Query: 354 SKRMDAAGIQPDIVTLSTLINCYSNMGRVDFGFAVLASILKRGFEPDAVXXXXXXXXXXX 175
           S R++  GIQPD++TL+ LINC+ +MG++ FGF+VLA ILKRG+ PD V           
Sbjct: 82  SHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCL 141

Query: 174 XXKVADAMDLFTRMLENGYPCNEVSYGTVMNGICKSVNSTAALQFMRAMEKKQLPPN 4
             +V  A+    ++L  G+  N+VSY T++NG+CK  ++  A++ +R ++ +   PN
Sbjct: 142 KGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPN 198


>ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  100 bits (248), Expect = 2e-19
 Identities = 48/117 (41%), Positives = 75/117 (64%)
 Frame = -1

Query: 354 SKRMDAAGIQPDIVTLSTLINCYSNMGRVDFGFAVLASILKRGFEPDAVXXXXXXXXXXX 175
           S++MD+ GI PD+ TL+ +IN   ++ RVDF F+ LA ILK G +PDA            
Sbjct: 93  SRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCV 152

Query: 174 XXKVADAMDLFTRMLENGYPCNEVSYGTVMNGICKSVNSTAALQFMRAMEKKQLPPN 4
             K+ +A+ LF +M+  G+  N V+YGT++NG+CK  N++AA++ +R+ME+    PN
Sbjct: 153 EGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPN 209



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/109 (28%), Positives = 52/109 (47%)
 Frame = -1

Query: 330 IQPDIVTLSTLINCYSNMGRVDFGFAVLASILKRGFEPDAVXXXXXXXXXXXXXKVADAM 151
           I PD+ TL+T+++     G V     V+  ++ RG EP+ V             +V  A+
Sbjct: 276 IMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAV 335

Query: 150 DLFTRMLENGYPCNEVSYGTVMNGICKSVNSTAALQFMRAMEKKQLPPN 4
            +F  M+      N +SY T++NG CK  +   A+     M +++L PN
Sbjct: 336 KVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPN 384


>emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  100 bits (248), Expect = 2e-19
 Identities = 48/117 (41%), Positives = 75/117 (64%)
 Frame = -1

Query: 354 SKRMDAAGIQPDIVTLSTLINCYSNMGRVDFGFAVLASILKRGFEPDAVXXXXXXXXXXX 175
           S++MD+ GI PD+ TL+ +IN   ++ RVDF F+ LA ILK G +PDA            
Sbjct: 93  SRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCV 152

Query: 174 XXKVADAMDLFTRMLENGYPCNEVSYGTVMNGICKSVNSTAALQFMRAMEKKQLPPN 4
             K+ +A+ LF +M+  G+  N V+YGT++NG+CK  N++AA++ +R+ME+    PN
Sbjct: 153 EGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPN 209



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/109 (28%), Positives = 52/109 (47%)
 Frame = -1

Query: 330 IQPDIVTLSTLINCYSNMGRVDFGFAVLASILKRGFEPDAVXXXXXXXXXXXXXKVADAM 151
           I PD+ TL+T+++     G V     V+  ++ RG EP+ V             +V  A+
Sbjct: 276 IMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAV 335

Query: 150 DLFTRMLENGYPCNEVSYGTVMNGICKSVNSTAALQFMRAMEKKQLPPN 4
            +F  M+      N +SY T++NG CK  +   A+     M +++L PN
Sbjct: 336 KVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPN 384