BLASTX nr result

ID: Coptis24_contig00012273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012273
         (2109 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264410.1| PREDICTED: laccase-6 [Vitis vinifera] gi|297...   619   e-175
emb|CAN75876.1| hypothetical protein VITISV_029713 [Vitis vinifera]   619   e-175
ref|XP_002523314.1| laccase, putative [Ricinus communis] gi|2235...   577   e-162
ref|XP_002320207.1| predicted protein [Populus trichocarpa] gi|2...   560   e-157
ref|XP_003528785.1| PREDICTED: laccase-6-like [Glycine max]           550   e-154

>ref|XP_002264410.1| PREDICTED: laccase-6 [Vitis vinifera] gi|297745495|emb|CBI40575.3|
            unnamed protein product [Vitis vinifera]
          Length = 571

 Score =  619 bits (1597), Expect = e-175
 Identities = 286/354 (80%), Positives = 320/354 (90%)
 Frame = +3

Query: 90   QWPMGSSTRFYTFKVQKMRITKMCKSKDIVTVNGIFPGPVVYAQEDDRIIVKVTNETPYN 269
            QWP G+STRFY FKVQ MR+TK+C +K+IVT+NG+FPGPVVYAQEDDR+IVKVTNETPYN
Sbjct: 26   QWPGGTSTRFYDFKVQTMRVTKLCNTKEIVTINGMFPGPVVYAQEDDRVIVKVTNETPYN 85

Query: 270  ATIHWHGVRQRLSCWSDGPSYITQCPIQAGQTFTYEFTLVKQKGTMLWHAHFSWLRASVY 449
             TIHWHG+RQRLSCWSDGPSYITQCPIQAGQTFTYEFT+VKQKGT+LWHAH SWLR +VY
Sbjct: 86   TTIHWHGIRQRLSCWSDGPSYITQCPIQAGQTFTYEFTIVKQKGTLLWHAHVSWLRGTVY 145

Query: 450  GAIVVYPKTGVPYPFKYPYEEHIIILGEYWHKNLLQLEKATLASGGGPPTADAYTINGHP 629
            GAIVVYPKTGVPYPFKYPYEEHII+LGEYW K+L+QLE+  LASGGGPP A+A+TINGHP
Sbjct: 146  GAIVVYPKTGVPYPFKYPYEEHIILLGEYWLKDLVQLERQVLASGGGPPPANAFTINGHP 205

Query: 630  GPNYNCSNNDVYKIDVVPGKTYLLRLISAALNMETFFTISNHMLTIVEADAEYTKPYTVD 809
            GPNYNCS NDVYKIDVVPGKTYLLR+I+A LNME FF I++H LTIVE DAEYTKP+T D
Sbjct: 206  GPNYNCSKNDVYKIDVVPGKTYLLRVINAGLNMENFFAIAHHKLTIVEVDAEYTKPFTTD 265

Query: 810  RVMLGPGQTINVLVTADQSIGRFSMAMGPYMSAQNVPFQNISAIGYFQYVGSTPNSVSLS 989
            RVMLGPGQTINVLVT DQ IG++SMAMG YMSA+ V FQNISAI YFQY+G+ PNS++L 
Sbjct: 266  RVMLGPGQTINVLVTTDQPIGKYSMAMGAYMSAKGVKFQNISAIAYFQYLGAVPNSIALP 325

Query: 990  AQLPSFNDNLAVKTVMDGLRSLNPVDVPLEIDNNLFFTIGLNVEKCHSSNPNKS 1151
            AQLPSFNDNLAVKTVMDGLRSLNPV+V  EID NLF+TIGLNV+KC S  P  +
Sbjct: 326  AQLPSFNDNLAVKTVMDGLRSLNPVNVSKEIDTNLFYTIGLNVQKCRSKTPKNN 379


>emb|CAN75876.1| hypothetical protein VITISV_029713 [Vitis vinifera]
          Length = 571

 Score =  619 bits (1597), Expect = e-175
 Identities = 286/354 (80%), Positives = 320/354 (90%)
 Frame = +3

Query: 90   QWPMGSSTRFYTFKVQKMRITKMCKSKDIVTVNGIFPGPVVYAQEDDRIIVKVTNETPYN 269
            QWP G+STRFY FKVQ MR+TK+C +K+IVT+NG+FPGPVVYAQEDDR+IVKVTNETPYN
Sbjct: 26   QWPGGTSTRFYDFKVQTMRVTKLCNTKEIVTINGMFPGPVVYAQEDDRVIVKVTNETPYN 85

Query: 270  ATIHWHGVRQRLSCWSDGPSYITQCPIQAGQTFTYEFTLVKQKGTMLWHAHFSWLRASVY 449
             TIHWHG+RQRLSCWSDGPSYITQCPIQAGQTFTYEFT+VKQKGT+LWHAH SWLR +VY
Sbjct: 86   TTIHWHGIRQRLSCWSDGPSYITQCPIQAGQTFTYEFTIVKQKGTLLWHAHVSWLRGTVY 145

Query: 450  GAIVVYPKTGVPYPFKYPYEEHIIILGEYWHKNLLQLEKATLASGGGPPTADAYTINGHP 629
            GAIVVYPKTGVPYPFKYPYEEHII+LGEYW K+L+QLE+  LASGGGPP A+A+TINGHP
Sbjct: 146  GAIVVYPKTGVPYPFKYPYEEHIILLGEYWLKDLVQLERQVLASGGGPPPANAFTINGHP 205

Query: 630  GPNYNCSNNDVYKIDVVPGKTYLLRLISAALNMETFFTISNHMLTIVEADAEYTKPYTVD 809
            GPNYNCS NDVYKIDVVPGKTYLLR+I+A LNME FF I++H LTIVE DAEYTKP+T D
Sbjct: 206  GPNYNCSKNDVYKIDVVPGKTYLLRVINAGLNMENFFAIAHHKLTIVEVDAEYTKPFTTD 265

Query: 810  RVMLGPGQTINVLVTADQSIGRFSMAMGPYMSAQNVPFQNISAIGYFQYVGSTPNSVSLS 989
            RVMLGPGQTINVLVT DQ IG++SMAMG YMSA+ V FQNISAI YFQY+G+ PNS++L 
Sbjct: 266  RVMLGPGQTINVLVTTDQPIGKYSMAMGAYMSAKGVKFQNISAIAYFQYLGAVPNSIALP 325

Query: 990  AQLPSFNDNLAVKTVMDGLRSLNPVDVPLEIDNNLFFTIGLNVEKCHSSNPNKS 1151
            AQLPSFNDNLAVKTVMDGLRSLNPV+V  EID NLF+TIGLNV+KC S  P  +
Sbjct: 326  AQLPSFNDNLAVKTVMDGLRSLNPVNVSKEIDTNLFYTIGLNVQKCRSKTPKNN 379


>ref|XP_002523314.1| laccase, putative [Ricinus communis] gi|223537402|gb|EEF39030.1|
            laccase, putative [Ricinus communis]
          Length = 572

 Score =  577 bits (1486), Expect = e-162
 Identities = 266/353 (75%), Positives = 303/353 (85%)
 Frame = +3

Query: 93   WPMGSSTRFYTFKVQKMRITKMCKSKDIVTVNGIFPGPVVYAQEDDRIIVKVTNETPYNA 272
            WP G STRFY FKV  M + K+C +K+IV VN I+PGPVVYAQE DRIIVKVTNE+PYNA
Sbjct: 28   WPRGRSTRFYDFKVHTMTVKKLCNTKEIVAVNNIYPGPVVYAQEGDRIIVKVTNESPYNA 87

Query: 273  TIHWHGVRQRLSCWSDGPSYITQCPIQAGQTFTYEFTLVKQKGTMLWHAHFSWLRASVYG 452
            TIHWHGVRQ LSCW DGPSYITQCPIQ GQ+FTYEFTLVKQKGT  WHAH SWLR +VYG
Sbjct: 88   TIHWHGVRQILSCWFDGPSYITQCPIQPGQSFTYEFTLVKQKGTFFWHAHVSWLRGTVYG 147

Query: 453  AIVVYPKTGVPYPFKYPYEEHIIILGEYWHKNLLQLEKATLASGGGPPTADAYTINGHPG 632
            AIVV+PKTGVPYPF +PYEEH+I+LGEYW ++++QLE+  LASGG PP ++AYTING PG
Sbjct: 148  AIVVHPKTGVPYPFPFPYEEHVILLGEYWLQDVMQLERQMLASGGAPPPSNAYTINGRPG 207

Query: 633  PNYNCSNNDVYKIDVVPGKTYLLRLISAALNMETFFTISNHMLTIVEADAEYTKPYTVDR 812
            PNYNCS NDVYKIDVVPGKTY+LRLI+A LNME FF I+NH LT+VEADAEYTKP+T  R
Sbjct: 208  PNYNCSANDVYKIDVVPGKTYMLRLINAGLNMENFFAIANHRLTVVEADAEYTKPFTTSR 267

Query: 813  VMLGPGQTINVLVTADQSIGRFSMAMGPYMSAQNVPFQNISAIGYFQYVGSTPNSVSLSA 992
            VMLGPGQT+NVLVTADQ IG++SMAMGPYMSAQ V FQNIS+I YFQYVG+TPNS+S  A
Sbjct: 268  VMLGPGQTMNVLVTADQPIGKYSMAMGPYMSAQGVSFQNISSIAYFQYVGATPNSISFPA 327

Query: 993  QLPSFNDNLAVKTVMDGLRSLNPVDVPLEIDNNLFFTIGLNVEKCHSSNPNKS 1151
            +LP FNDNLAVKT+MDGL+ LN  +VP E+D NLF TIGLNV KC S  P ++
Sbjct: 328  RLPIFNDNLAVKTIMDGLKGLNTSNVPKEVDRNLFVTIGLNVNKCRSKKPQRN 380


>ref|XP_002320207.1| predicted protein [Populus trichocarpa] gi|222860980|gb|EEE98522.1|
            predicted protein [Populus trichocarpa]
          Length = 529

 Score =  560 bits (1444), Expect = e-157
 Identities = 262/337 (77%), Positives = 293/337 (86%)
 Frame = +3

Query: 141  MRITKMCKSKDIVTVNGIFPGPVVYAQEDDRIIVKVTNETPYNATIHWHGVRQRLSCWSD 320
            M + K+C SK IVTVN +FPGPVVYAQ+ DR+IVKV+NE+PYNATIHWHGVRQ LSCW D
Sbjct: 1    MTVNKLCNSKQIVTVNNMFPGPVVYAQQGDRLIVKVSNESPYNATIHWHGVRQILSCWFD 60

Query: 321  GPSYITQCPIQAGQTFTYEFTLVKQKGTMLWHAHFSWLRASVYGAIVVYPKTGVPYPFKY 500
            GPSYITQCPIQ GQTFTYEFTLV QKGT  WHAH SWLRA+VYGA+VVYPK GVPYPFKY
Sbjct: 61   GPSYITQCPIQPGQTFTYEFTLVGQKGTFFWHAHVSWLRATVYGALVVYPKPGVPYPFKY 120

Query: 501  PYEEHIIILGEYWHKNLLQLEKATLASGGGPPTADAYTINGHPGPNYNCSNNDVYKIDVV 680
            PYEEHI+ILGEYW ++++ LE+  +ASGGGPP A+AYTINGHPGPNYNCS  DVYKIDV+
Sbjct: 121  PYEEHIVILGEYWLQDIVHLERQVVASGGGPPPANAYTINGHPGPNYNCSATDVYKIDVL 180

Query: 681  PGKTYLLRLISAALNMETFFTISNHMLTIVEADAEYTKPYTVDRVMLGPGQTINVLVTAD 860
            PGKTYLLRLI+A LNME FF I+NH LTIVEADAEYTKP+T DRVMLGPGQT+ VLVTAD
Sbjct: 181  PGKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYTKPFTTDRVMLGPGQTMIVLVTAD 240

Query: 861  QSIGRFSMAMGPYMSAQNVPFQNISAIGYFQYVGSTPNSVSLSAQLPSFNDNLAVKTVMD 1040
            Q+IG++SMAMGPY S QNV FQNISAI YFQYVG+ PNS+SL A+LPSFNDNLAVKTVMD
Sbjct: 241  QTIGKYSMAMGPYASGQNVAFQNISAIAYFQYVGAMPNSLSLPARLPSFNDNLAVKTVMD 300

Query: 1041 GLRSLNPVDVPLEIDNNLFFTIGLNVEKCHSSNPNKS 1151
            GLR LN  DVP EID NLF TIG+NV KC S  P ++
Sbjct: 301  GLRGLNTSDVPKEIDTNLFLTIGMNVNKCRSKTPQQN 337


>ref|XP_003528785.1| PREDICTED: laccase-6-like [Glycine max]
          Length = 572

 Score =  550 bits (1416), Expect = e-154
 Identities = 253/353 (71%), Positives = 300/353 (84%)
 Frame = +3

Query: 108  STRFYTFKVQKMRITKMCKSKDIVTVNGIFPGPVVYAQEDDRIIVKVTNETPYNATIHWH 287
            ST+FY FKVQ  R+TK+C SKDIVT+NG+FPGPVVYAQEDDRIIVKVTN TP+N TIHWH
Sbjct: 33   STKFYDFKVQTKRVTKICSSKDIVTINGMFPGPVVYAQEDDRIIVKVTNMTPFNVTIHWH 92

Query: 288  GVRQRLSCWSDGPSYITQCPIQAGQTFTYEFTLVKQKGTMLWHAHFSWLRASVYGAIVVY 467
            GVRQRLSCW DGPS ITQCPIQAGQ+FTY FT+V+QKGT  WHAH SWLR +VYGA++VY
Sbjct: 93   GVRQRLSCWYDGPSLITQCPIQAGQSFTYNFTVVQQKGTFFWHAHVSWLRGTVYGAMIVY 152

Query: 468  PKTGVPYPFKYPYEEHIIILGEYWHKNLLQLEKATLASGGGPPTADAYTINGHPGPNYNC 647
            PKTGVPYPFK+P++EHIIILGEYW ++L QLE AT+ASGG PP  DAYTINGHPGPNYNC
Sbjct: 153  PKTGVPYPFKFPFQEHIIILGEYWLQDLQQLENATIASGGPPPITDAYTINGHPGPNYNC 212

Query: 648  SNNDVYKIDVVPGKTYLLRLISAALNMETFFTISNHMLTIVEADAEYTKPYTVDRVMLGP 827
            S NDVY+IDV+PGKTYLLRLI+A LN E FF I+NH LTIVEADAEYTKP+T + VM+GP
Sbjct: 213  STNDVYQIDVIPGKTYLLRLINAGLNTENFFAIANHNLTIVEADAEYTKPFTTNTVMIGP 272

Query: 828  GQTINVLVTADQSIGRFSMAMGPYMSAQNVPFQNISAIGYFQYVGSTPNSVSLSAQLPSF 1007
            GQT+NVLV+A+Q +G++SM + PY S + + +QN+SAI YF Y+G+  +S+SL A+LP  
Sbjct: 273  GQTLNVLVSANQPVGKYSMGVAPYESGRMIIYQNVSAIAYFNYIGTPADSLSLPAKLPKL 332

Query: 1008 NDNLAVKTVMDGLRSLNPVDVPLEIDNNLFFTIGLNVEKCHSSNPNKSF*LLH 1166
            +D LAVKTVMDGLRSLN V+V  EID NLF TIGLNV+KCHS  P ++   +H
Sbjct: 333  DDELAVKTVMDGLRSLNRVNVFKEIDKNLFVTIGLNVQKCHSKKPKQNCQFMH 385


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