BLASTX nr result

ID: Coptis24_contig00012181 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012181
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18661.3| unnamed protein product [Vitis vinifera]              120   9e-26
ref|XP_002266990.1| PREDICTED: uncharacterized protein LOC100257...   120   9e-26
ref|XP_003595829.1| hypothetical protein MTR_2g062300 [Medicago ...    84   1e-14
ref|XP_001785292.1| predicted protein [Physcomitrella patens sub...    83   3e-14
ref|XP_001772202.1| predicted protein [Physcomitrella patens sub...    81   1e-13

>emb|CBI18661.3| unnamed protein product [Vitis vinifera]
          Length = 566

 Score =  120 bits (302), Expect = 9e-26
 Identities = 67/124 (54%), Positives = 80/124 (64%)
 Frame = +3

Query: 3   QSISWDLLPSSIHDSGKDAIHCRNSAFQAAVDALHEASAAESVIRCMSRFAELCESAPRD 182
           Q+ISWD LP  IHD GKDA   RN AF AAV+AL EASAAE VI+CMS FAELCES+ +D
Sbjct: 260 QNISWDSLPPRIHDLGKDAASYRNVAFLAAVNALEEASAAEGVIQCMSMFAELCESSQKD 319

Query: 183 SPGILIGKFLNVHQSMQRKASVVDALLKARFVEARTSVAXXXXXXXXXXXKVFLDKNLDA 362
           S G L+ +FLN+HQ MQ+ A  ++ALL  R  E  +S             K F +KN  A
Sbjct: 320 SAGPLVEQFLNLHQDMQKAAMSINALLSTRLAEVESSSCCSSQPPLAEACKNFNNKN--A 377

Query: 363 ESWV 374
            SWV
Sbjct: 378 ISWV 381


>ref|XP_002266990.1| PREDICTED: uncharacterized protein LOC100257965 [Vitis vinifera]
          Length = 571

 Score =  120 bits (302), Expect = 9e-26
 Identities = 67/124 (54%), Positives = 80/124 (64%)
 Frame = +3

Query: 3   QSISWDLLPSSIHDSGKDAIHCRNSAFQAAVDALHEASAAESVIRCMSRFAELCESAPRD 182
           Q+ISWD LP  IHD GKDA   RN AF AAV+AL EASAAE VI+CMS FAELCES+ +D
Sbjct: 265 QNISWDSLPPRIHDLGKDAASYRNVAFLAAVNALEEASAAEGVIQCMSMFAELCESSQKD 324

Query: 183 SPGILIGKFLNVHQSMQRKASVVDALLKARFVEARTSVAXXXXXXXXXXXKVFLDKNLDA 362
           S G L+ +FLN+HQ MQ+ A  ++ALL  R  E  +S             K F +KN  A
Sbjct: 325 SAGPLVEQFLNLHQDMQKAAMSINALLSTRLAEVESSSCCSSQPPLAEACKNFNNKN--A 382

Query: 363 ESWV 374
            SWV
Sbjct: 383 ISWV 386


>ref|XP_003595829.1| hypothetical protein MTR_2g062300 [Medicago truncatula]
           gi|124360104|gb|ABN08120.1| Legume lectin, beta domain
           [Medicago truncatula] gi|355484877|gb|AES66080.1|
           hypothetical protein MTR_2g062300 [Medicago truncatula]
          Length = 585

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 45/87 (51%), Positives = 59/87 (67%)
 Frame = +3

Query: 3   QSISWDLLPSSIHDSGKDAIHCRNSAFQAAVDALHEASAAESVIRCMSRFAELCESAPRD 182
           +S SWD LP  I + GK  +  RN AF AAV +L EASAA++V++CM  FAELCES    
Sbjct: 280 KSGSWDNLPPPICNLGKQVVTHRNVAFLAAVRSLEEASAADTVLQCMCMFAELCESRQTL 339

Query: 183 SPGILIGKFLNVHQSMQRKASVVDALL 263
           S G+L+ +FL +H S+QR   V D+LL
Sbjct: 340 SAGLLVKQFLELHLSLQRVTVVFDSLL 366


>ref|XP_001785292.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162663126|gb|EDQ49909.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 860

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 48/120 (40%), Positives = 67/120 (55%)
 Frame = +3

Query: 15  WDLLPSSIHDSGKDAIHCRNSAFQAAVDALHEASAAESVIRCMSRFAELCESAPRDSPGI 194
           W+ LP ++   G +A+  R +A  AAVDAL EASAAESV+R +S FAELC  A  D P  
Sbjct: 470 WESLPGNLAMYGMEALQSRETAALAAVDALQEASAAESVLRSLSMFAELCSVARTDHPQP 529

Query: 195 LIGKFLNVHQSMQRKASVVDALLKARFVEARTSVAXXXXXXXXXXXKVFLDKNLDAESWV 374
            + +FL++ QS++   +V DAL  AR      +             +V +DK+  A SWV
Sbjct: 530 SVEQFLSLSQSLKNAVAVSDALSTARNSAEMPTPTEDANDVSYDKAQVVMDKSRSATSWV 589


>ref|XP_001772202.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162676533|gb|EDQ63015.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 995

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/89 (44%), Positives = 59/89 (66%)
 Frame = +3

Query: 6   SISWDLLPSSIHDSGKDAIHCRNSAFQAAVDALHEASAAESVIRCMSRFAELCESAPRDS 185
           S+SWD LP+S+   GKD +  R+ A  AA  AL EASAAE V+R +S FAE+C +A  DS
Sbjct: 612 SVSWDSLPASLATLGKDVLQTRDVASAAAAQALQEASAAECVVRSLSMFAEICTTARTDS 671

Query: 186 PGILIGKFLNVHQSMQRKASVVDALLKAR 272
           P   + +FL++H+++    +VV++L   R
Sbjct: 672 PQSTVEQFLSLHRTLSDAITVVESLAAIR 700


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