BLASTX nr result

ID: Coptis24_contig00012167 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012167
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16149.3| unnamed protein product [Vitis vinifera]              105   5e-21
ref|XP_002283955.1| PREDICTED: uncharacterized protein At3g17950...   105   5e-21
ref|XP_002309051.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
ref|XP_002298361.1| predicted protein [Populus trichocarpa] gi|2...   102   2e-20
emb|CAN68754.1| hypothetical protein VITISV_035531 [Vitis vinifera]   102   3e-20

>emb|CBI16149.3| unnamed protein product [Vitis vinifera]
          Length = 205

 Score =  105 bits (261), Expect = 5e-21
 Identities = 61/100 (61%), Positives = 69/100 (69%)
 Frame = -3

Query: 300 MAQIQEEGWPLGLQPLNMRAGVANNHDFSGSMSFNXXXXXXXXXXXXXXXXXXXXXTGSF 121
           MAQ QEEGWPLGLQPLN+R G+A   DFSGS+SFN                     TGSF
Sbjct: 1   MAQ-QEEGWPLGLQPLNVRIGLARIGDFSGSISFNTLLTGSPSSSTDSSSDLDTESTGSF 59

Query: 120 FHDKSITLGSLIGVSSILELSRRSTRGRRADSMSLRSKKS 1
           FHDKSITLGSLIGVSSI+EL+ RS RGRRA+  SL+ K+S
Sbjct: 60  FHDKSITLGSLIGVSSIIELTGRSVRGRRAE--SLKGKRS 97


>ref|XP_002283955.1| PREDICTED: uncharacterized protein At3g17950 [Vitis vinifera]
          Length = 212

 Score =  105 bits (261), Expect = 5e-21
 Identities = 61/100 (61%), Positives = 69/100 (69%)
 Frame = -3

Query: 300 MAQIQEEGWPLGLQPLNMRAGVANNHDFSGSMSFNXXXXXXXXXXXXXXXXXXXXXTGSF 121
           MAQ QEEGWPLGLQPLN+R G+A   DFSGS+SFN                     TGSF
Sbjct: 1   MAQ-QEEGWPLGLQPLNVRIGLARIGDFSGSISFNTLLTGSPSSSTDSSSDLDTESTGSF 59

Query: 120 FHDKSITLGSLIGVSSILELSRRSTRGRRADSMSLRSKKS 1
           FHDKSITLGSLIGVSSI+EL+ RS RGRRA+  SL+ K+S
Sbjct: 60  FHDKSITLGSLIGVSSIIELTGRSVRGRRAE--SLKGKRS 97


>ref|XP_002309051.1| predicted protein [Populus trichocarpa] gi|222855027|gb|EEE92574.1|
           predicted protein [Populus trichocarpa]
          Length = 215

 Score =  103 bits (257), Expect = 1e-20
 Identities = 56/99 (56%), Positives = 67/99 (67%)
 Frame = -3

Query: 297 AQIQEEGWPLGLQPLNMRAGVANNHDFSGSMSFNXXXXXXXXXXXXXXXXXXXXXTGSFF 118
           AQ QE+GWPLGL+PLN R G+  N DF+GS+SF+                     TGSFF
Sbjct: 5   AQQQEDGWPLGLRPLNARVGLVRNRDFNGSISFSTLLTASNSSFTDSSSDLDTESTGSFF 64

Query: 117 HDKSITLGSLIGVSSILELSRRSTRGRRADSMSLRSKKS 1
           HDKS+TLGSLIGVSSILELSRRSTRGR  +  +LR +K+
Sbjct: 65  HDKSLTLGSLIGVSSILELSRRSTRGRTTE--TLREQKN 101


>ref|XP_002298361.1| predicted protein [Populus trichocarpa] gi|222845619|gb|EEE83166.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score =  102 bits (255), Expect = 2e-20
 Identities = 54/87 (62%), Positives = 59/87 (67%)
 Frame = -3

Query: 288 QEEGWPLGLQPLNMRAGVANNHDFSGSMSFNXXXXXXXXXXXXXXXXXXXXXTGSFFHDK 109
           QEEGWPLGLQPLN R G+A N DFSGS SFN                     TGSFFHDK
Sbjct: 4   QEEGWPLGLQPLNARVGIARNGDFSGSRSFNTLITGSPTSSTDSSSDLDTESTGSFFHDK 63

Query: 108 SITLGSLIGVSSILELSRRSTRGRRAD 28
           SITLGSLIGVS+ILELSR+STR R+ +
Sbjct: 64  SITLGSLIGVSNILELSRKSTRTRKVE 90


>emb|CAN68754.1| hypothetical protein VITISV_035531 [Vitis vinifera]
          Length = 242

 Score =  102 bits (254), Expect = 3e-20
 Identities = 57/95 (60%), Positives = 65/95 (68%)
 Frame = -3

Query: 285 EEGWPLGLQPLNMRAGVANNHDFSGSMSFNXXXXXXXXXXXXXXXXXXXXXTGSFFHDKS 106
           EEGWPLGLQPLN+R G+A   DFSGS+SFN                     TGSFFHDKS
Sbjct: 35  EEGWPLGLQPLNVRIGLARIGDFSGSISFNTLLTGSPSSSTDSSSDLDTESTGSFFHDKS 94

Query: 105 ITLGSLIGVSSILELSRRSTRGRRADSMSLRSKKS 1
           ITLGSLIGVSSI+EL+ RS RGRRA+  SL+ K+S
Sbjct: 95  ITLGSLIGVSSIIELTGRSVRGRRAE--SLKGKRS 127


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