BLASTX nr result
ID: Coptis24_contig00012146
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00012146
(1868 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN69220.1| hypothetical protein VITISV_012016 [Vitis vinifera] 323 1e-85
emb|CBI22961.3| unnamed protein product [Vitis vinifera] 323 1e-85
ref|XP_002272460.2| PREDICTED: uncharacterized protein LOC100255... 322 2e-85
ref|NP_851004.1| tetratricopeptide repeat domain-containing prot... 282 2e-73
ref|XP_002883024.1| tetratricopeptide repeat-containing protein ... 280 9e-73
>emb|CAN69220.1| hypothetical protein VITISV_012016 [Vitis vinifera]
Length = 532
Score = 323 bits (828), Expect = 1e-85
Identities = 215/466 (46%), Positives = 259/466 (55%), Gaps = 55/466 (11%)
Frame = +1
Query: 322 SMVGDIHGKSWATKXXXXXXXXXXXXXXIGIAQKNPNLFSDLLGSALGQSKNSGNVPLKN 501
SMVGDI GKSWA IGI KNPNLF DL+GSALG K + NVPLKN
Sbjct: 85 SMVGDIFGKSWAPSPGPSSG--------IGIVDKNPNLFGDLVGSALG--KVNSNVPLKN 134
Query: 502 AAPVSVGAAKGGSYSMGNFANALPKTGGAVPLKSGGNWGSTENXXXXXXXXXXXXXXXX- 678
+ PVS + K YSMGN A++LPKTG + KSGGNWG++E+
Sbjct: 135 STPVSAQSTKS-PYSMGNLADSLPKTGNSA--KSGGNWGNSEDFGGYSSGYNNSSNVNKS 191
Query: 679 ---------------------TVKKDPFGSLADFESKKDQGVXXXXXXXXXXXXX-LFGD 792
T KKDPFGSL DF SK + FGD
Sbjct: 192 TNLGGPSTQSMAGAGGGGVGMTSKKDPFGSLVDFGSKPMGSLNSASKGSKVNSRDEAFGD 251
Query: 793 FKNAGTSNVS---SSQFTSINNDFVGGNVSSSTKNDSFEDFMGGNMSSSS---------- 933
F+NA S+ S SS F + N+ +GG V+S +++ F DF + SS+S
Sbjct: 252 FQNAPKSSASAFPSSAFPASNS--MGGKVNS--RDELFGDFQNASKSSASAFSSGSFPTN 307
Query: 934 -------------KNDSF----RNFGSVPVQPSTQSKGVDPLDALFSSTSGSTNAGQVKS 1062
K DSF ++FGS QP Q+ VDPLD LF+S S S G S
Sbjct: 308 NSNSMGSSSGFDPKMDSFGIPTQDFGSQN-QPPVQTSNVDPLDMLFAS-SASAGTGPTGS 365
Query: 1063 DGGGHEMFSEMADWDVAPEFGGG--DVXXXXXXXXXXXXXAGMTASSAKNKGLDSYKQGQ 1236
+ G + FSE DW + +FGGG + AG+TA+SAK+KGLD++KQGQ
Sbjct: 366 ERVGEQQFSEGDDWGLDSDFGGGHDNGGTTTELEGLPPPPAGVTAASAKSKGLDNHKQGQ 425
Query: 1237 HADAIKWLSWAVVLLENAXXXXXXXXXXXXXXXCYKEVGEYKKAIADCTKVLEHDGANVS 1416
+ADAIKWLSWAVVLLE A CYKEVGEYKKA+ADC+KVLEHD NVS
Sbjct: 426 YADAIKWLSWAVVLLEKAGDDAGTMEVLTCRASCYKEVGEYKKAVADCSKVLEHDEKNVS 485
Query: 1417 VLLQRALLYESTEKYKLGAEDLRTVMKIDPGNRLARSIIHRLLQLA 1554
VL+QRALLYES EKYKLGAEDLRTV+K DPGNR+ARS IHRL ++A
Sbjct: 486 VLVQRALLYESIEKYKLGAEDLRTVLKFDPGNRVARSTIHRLTKMA 531
>emb|CBI22961.3| unnamed protein product [Vitis vinifera]
Length = 451
Score = 323 bits (827), Expect = 1e-85
Identities = 196/389 (50%), Positives = 235/389 (60%), Gaps = 6/389 (1%)
Frame = +1
Query: 406 IGIAQKNPNLFSDLLGSALGQSKNSGNVPLKNAAPVSVGAAKGGSYSMGNFANALPKTGG 585
IGI KNPNLF DL+GSALG K + NVPLKN+ PVS + K YSMGN A++LPKTG
Sbjct: 82 IGIVDKNPNLFGDLVGSALG--KVNSNVPLKNSTPVSAQSTKS-PYSMGNLADSLPKTGN 138
Query: 586 AVPLKSGGNWGSTENXXXXXXXXXXXXXXXXTVKKDPFGSLADFESKKDQGVXXXXXXXX 765
+ KSGGNWG++EN T KKDPFGSL DF SK +
Sbjct: 139 SA--KSGGNWGNSENFGGYSSGYNNSSGVGMTSKKDPFGSLVDFGSKPMGSLNSASKGSK 196
Query: 766 XXXXX-LFGDFKNAGTSNVS---SSQFTSINNDFVGGNVSSSTKNDSFEDFMGGNMSSSS 933
FGDF+NA S+ S SS F + N++ +G + K DSF
Sbjct: 197 VNSRDEAFGDFQNAPKSSASAFPSSSFPTNNSNSMGSSSGFDPKMDSF------------ 244
Query: 934 KNDSFRNFGSVPVQPSTQSKGVDPLDALFSSTSGSTNAGQVKSDGGGHEMFSEMADWDVA 1113
++FGS QP Q+ VDPLD LF+S S S G S+ G + FSE DW +
Sbjct: 245 -GIPTQDFGSQN-QPPVQTSNVDPLDMLFAS-SASAGTGPTGSERVGEQQFSEGDDWGLD 301
Query: 1114 PEFGGG--DVXXXXXXXXXXXXXAGMTASSAKNKGLDSYKQGQHADAIKWLSWAVVLLEN 1287
+FGGG + AG+TA+SAK+KGLD++KQGQ+ADAIKWLSWAVVLLE
Sbjct: 302 SDFGGGHDNGGTTTELEGLPPPPAGVTAASAKSKGLDNHKQGQYADAIKWLSWAVVLLEK 361
Query: 1288 AXXXXXXXXXXXXXXXCYKEVGEYKKAIADCTKVLEHDGANVSVLLQRALLYESTEKYKL 1467
A CYKEVGEYKKA+ADC+KVLEHD NVSVL+QRALLYES EKYKL
Sbjct: 362 AGDDAGTMEVLTCRASCYKEVGEYKKAVADCSKVLEHDEKNVSVLVQRALLYESIEKYKL 421
Query: 1468 GAEDLRTVMKIDPGNRLARSIIHRLLQLA 1554
GAEDLRTV+K DPGNR+ARS IHRL ++A
Sbjct: 422 GAEDLRTVLKFDPGNRVARSTIHRLTKMA 450
>ref|XP_002272460.2| PREDICTED: uncharacterized protein LOC100255130 [Vitis vinifera]
Length = 496
Score = 322 bits (826), Expect = 2e-85
Identities = 207/439 (47%), Positives = 246/439 (56%), Gaps = 28/439 (6%)
Frame = +1
Query: 322 SMVGDIHGKSWATKXXXXXXXXXXXXXXIGIAQKNPNLFSDLLGSALGQSKNSGNVPLKN 501
SMVGDI GKSWA IGI KNPNLF DL+GSALG K + NVPLKN
Sbjct: 85 SMVGDIFGKSWAPSPGPSSG--------IGIVDKNPNLFGDLVGSALG--KVNSNVPLKN 134
Query: 502 AAPVSVGAAKGGSYSMGNFANALPKTGGAVPLKSGGNWGSTENXXXXXXXXXXXXXXXX- 678
+ PVS + K YSMGN A++LPKTG + KSGGNWG++EN
Sbjct: 135 STPVSAQSTKS-PYSMGNLADSLPKTGNSA--KSGGNWGNSENFGGYSSGYNNSSNVNKS 191
Query: 679 ---------------------TVKKDPFGSLADFESKKDQGVXXXXXXXXXXXXX-LFGD 792
T KKDPFGSL DF SK + FGD
Sbjct: 192 TNLGGPSTQSMAGAGGGGVGMTSKKDPFGSLVDFGSKPMGSLNSASKGSKVNSRDEAFGD 251
Query: 793 FKNAGTSNVS---SSQFTSINNDFVGGNVSSSTKNDSFEDFMGGNMSSSSKNDSFRNFGS 963
F+NA S+ S SS F + N++ +G + K DSF ++FGS
Sbjct: 252 FQNAPKSSASAFPSSSFPTNNSNSMGSSSGFDPKMDSF-------------GIPTQDFGS 298
Query: 964 VPVQPSTQSKGVDPLDALFSSTSGSTNAGQVKSDGGGHEMFSEMADWDVAPEFGGG--DV 1137
QP Q+ VDPLD LF+S S S G S+ G + FSE DW + +FGGG +
Sbjct: 299 QN-QPPVQTSNVDPLDMLFAS-SASAGTGPTGSERVGEQQFSEGDDWGLDSDFGGGHDNG 356
Query: 1138 XXXXXXXXXXXXXAGMTASSAKNKGLDSYKQGQHADAIKWLSWAVVLLENAXXXXXXXXX 1317
AG+TA+SAK+KGLD++KQGQ+ADAIKWLSWAVVLLE A
Sbjct: 357 GTTTELEGLPPPPAGVTAASAKSKGLDNHKQGQYADAIKWLSWAVVLLEKAGDDAGTMEV 416
Query: 1318 XXXXXXCYKEVGEYKKAIADCTKVLEHDGANVSVLLQRALLYESTEKYKLGAEDLRTVMK 1497
CYKEVGEYKKA+ADC+KVLEHD NVSVL+QRALLYES EKYKLGAEDLRTV+K
Sbjct: 417 LTCRASCYKEVGEYKKAVADCSKVLEHDEKNVSVLVQRALLYESIEKYKLGAEDLRTVLK 476
Query: 1498 IDPGNRLARSIIHRLLQLA 1554
DPGNR+ARS IHRL ++A
Sbjct: 477 FDPGNRVARSTIHRLTKMA 495
>ref|NP_851004.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana] gi|44917447|gb|AAS49048.1| At3g16760
[Arabidopsis thaliana] gi|50253544|gb|AAT71974.1|
At3g16760 [Arabidopsis thaliana]
gi|110736446|dbj|BAF00191.1| hypothetical protein
[Arabidopsis thaliana] gi|332642341|gb|AEE75862.1|
tetratricopeptide repeat domain-containing protein
[Arabidopsis thaliana]
Length = 475
Score = 282 bits (721), Expect = 2e-73
Identities = 189/500 (37%), Positives = 249/500 (49%), Gaps = 28/500 (5%)
Frame = +1
Query: 139 DFDLGSNFSNKNTPQPLNSQXXXXXXXXXXXXXXXXXXXXXXXXXXHQSS---SSIRSEL 309
DFDLG S +PLN Q HQ + S+IRSE+
Sbjct: 17 DFDLGLGSSQG---RPLNGQKSQTSSYSSSNSQPRPAWQPGKPSWTHQPAPKQSTIRSEI 73
Query: 310 LTH-TSMVGDIHGKSWATKXXXXXXXXXXXXXXIGIAQKNPNLFSDLLGSALGQSKNSGN 486
+ TSMVGDIHGK+W + IGI K+P+LF DL+GSA+GQ K+S N
Sbjct: 74 GSGPTSMVGDIHGKTWGSASGSGSG--------IGIVNKDPSLFGDLVGSAIGQGKSSRN 125
Query: 487 VPLKNAAPVSVGAAKGGSYSMGNFANALPKTGGAVPLKSGGNWGSTENXXXXXXXXXXXX 666
VPLKNA PVS + YSMGN ++LPK+G + +K+GG G + N
Sbjct: 126 VPLKNAPPVSASGSSKSPYSMGNLGDSLPKSGNS--MKTGGGMGYSSNPSGFSGGYTSSG 183
Query: 667 XXXXTV--------------------KKDPFGSLADFESKKDQGVXXXXXXXXXXXXXLF 786
+ DPFGSL F SK F
Sbjct: 184 GFNANLGGPSMKNMAGGNLNGSGLPSNSDPFGSLVGFGSKSSGS--KPGKVNNNAQNDTF 241
Query: 787 GDFKNAGTSNVSSSQFTSINNDFVGGNVSSSTKNDSFEDFMGGNMSSSSKNDSFR----N 954
G+F+ G SN++S GG+ ++T+ + F F ++ S SF +
Sbjct: 242 GNFQ--GVSNLNS-----------GGSTGTTTQINDFGGFQASKSNTFSSGGSFNASNVD 288
Query: 955 FGSVPVQPSTQSKGVDPLDALFSSTSGSTNAGQVKSDGGGHEMFSEMADWDVAPEFGGGD 1134
FG P P + S DPL +FS++ S +++ G E F G
Sbjct: 289 FGVQPSGPQSSSANDDPL-GMFSNSKPSAAPPTPQTEDWGFESFD-------------GG 334
Query: 1135 VXXXXXXXXXXXXXAGMTASSAKNKGLDSYKQGQHADAIKWLSWAVVLLENAXXXXXXXX 1314
G++A+SAKNKG+D+ +QGQ+ADAIKWLSWAV+L++ A
Sbjct: 335 AGSTTELDGLPPPPPGVSATSAKNKGIDNQRQGQYADAIKWLSWAVILMDRAGDEAGSAE 394
Query: 1315 XXXXXXXCYKEVGEYKKAIADCTKVLEHDGANVSVLLQRALLYESTEKYKLGAEDLRTVM 1494
CYKEVGEYKKA+ADCTKVL+HD NV++L+QRALLYES EKYKLGAEDLR V+
Sbjct: 395 VLSTRASCYKEVGEYKKAVADCTKVLDHDKKNVTILVQRALLYESMEKYKLGAEDLRMVL 454
Query: 1495 KIDPGNRLARSIIHRLLQLA 1554
KIDPGNR+ARS +HRL ++A
Sbjct: 455 KIDPGNRIARSTVHRLTKMA 474
>ref|XP_002883024.1| tetratricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297328864|gb|EFH59283.1|
tetratricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 474
Score = 280 bits (716), Expect = 9e-73
Identities = 189/490 (38%), Positives = 253/490 (51%), Gaps = 18/490 (3%)
Frame = +1
Query: 139 DFDLGSNFSNKNTPQPLNSQXXXXXXXXXXXXXXXXXXXXXXXXXXHQSS---SSIRSEL 309
DFDLG S +PLN Q HQ + S+IRSE+
Sbjct: 17 DFDLGLGSSQG---RPLNGQKSQTSSYTSSNSQPRPAWQPGKPSWTHQPAPKQSTIRSEI 73
Query: 310 LTH-TSMVGDIHGKSWATKXXXXXXXXXXXXXXIGIAQKNPNLFSDLLGSALGQSKNSGN 486
+ TSMVGDIHGK+W + IGI K+P+LF DL+GSA+GQ K+S N
Sbjct: 74 GSGPTSMVGDIHGKTWGSASGSGSG--------IGIVNKDPSLFGDLVGSAIGQGKSSRN 125
Query: 487 VPLKNAAPVSVGAAKGGSYSMGNFANALPKTGGAVPLKSGGNWGSTENXXXXXXXXXXXX 666
VPLKNA PVS + YSMGNFA++LPK+G + +K GG G + N
Sbjct: 126 VPLKNAPPVSASGSSKSPYSMGNFADSLPKSGNS--MKPGGGMGYSSNPSGFSGGYKSSG 183
Query: 667 XXXXTVKKDPFGSLADFESKKDQGVXXXXXXXXXXXXXLFGDFKNAGTSNVSSSQFTSIN 846
V + +L S K+ FG G S SIN
Sbjct: 184 GMNSGVNANSSPNLGG-PSMKNMSGGNLSGSGLSSNSDPFGSLVGFG-----SKPSGSIN 237
Query: 847 NDFVGGNVSSSTKNDSFEDFMG-GNMSSS---SKNDSFRNFGSV----------PVQPST 984
+ G V+++ ++D+F +F G N++SS SK+++F + G P P +
Sbjct: 238 SGIKTGKVNNNAQSDAFGNFQGVSNVNSSGFASKSNTFSSGGGFNASNVDFCVQPSGPQS 297
Query: 985 QSKGVDPLDALFSSTSGSTNAGQVKSDGGGHEMFSEMADWDVAPEFGGGDVXXXXXXXXX 1164
S DPL +FSS+ + A +++ G E F G
Sbjct: 298 SSANDDPL-GMFSSSKPTAAAATPQTEDWGFESFD-------------GGAGSTTELDGL 343
Query: 1165 XXXXAGMTASSAKNKGLDSYKQGQHADAIKWLSWAVVLLENAXXXXXXXXXXXXXXXCYK 1344
G++A+SAK+KG+D+ +QGQ+ADAIKWLSWAV+L++ A CYK
Sbjct: 344 PPPPPGVSATSAKSKGIDNQRQGQYADAIKWLSWAVILMDRAGDEAGSAEVLSTRASCYK 403
Query: 1345 EVGEYKKAIADCTKVLEHDGANVSVLLQRALLYESTEKYKLGAEDLRTVMKIDPGNRLAR 1524
EVGEYKKA+ADCTKVL+HD NV++L+QRALLYES EKYKLGAEDLR V+KIDPGNR+AR
Sbjct: 404 EVGEYKKAVADCTKVLDHDKKNVTILVQRALLYESMEKYKLGAEDLRMVLKIDPGNRIAR 463
Query: 1525 SIIHRLLQLA 1554
S +HRL ++A
Sbjct: 464 STVHRLTKMA 473