BLASTX nr result

ID: Coptis24_contig00012127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012127
         (763 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523291.1| conserved hypothetical protein [Ricinus comm...   316   4e-84
ref|XP_002270724.1| PREDICTED: transforming growth factor-beta r...   313   3e-83
ref|XP_002303701.1| predicted protein [Populus trichocarpa] gi|2...   305   7e-81
ref|XP_003569134.1| PREDICTED: transforming growth factor-beta r...   276   5e-72
dbj|BAK03364.1| predicted protein [Hordeum vulgare subsp. vulgare]    275   6e-72

>ref|XP_002523291.1| conserved hypothetical protein [Ricinus communis]
            gi|223537465|gb|EEF39092.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1005

 Score =  316 bits (809), Expect = 4e-84
 Identities = 144/178 (80%), Positives = 166/178 (93%)
 Frame = -2

Query: 762  LKLEDSEAAEKYCVDIGRQDAYKQLLDMYLDPQDGKEPMFKAALRLLHNHGESLDPQQIL 583
            LKLED +AAE+YC +IGR DAY QLLDMYLDPQ+GK+PMFKAA+RLLHNHGESLDP Q+L
Sbjct: 828  LKLEDCDAAEQYCAEIGRPDAYMQLLDMYLDPQNGKKPMFKAAVRLLHNHGESLDPLQVL 887

Query: 582  ETLSPDMPLWFTSSMILKMLRARVHHHCQGQVVHNLSRAINIDSKLARLGERSRNVQIND 403
            ETLSP+MPL   S  IL+MLRAR+HHHCQGQ+VHNLSRAIN+D++LAR+ ERSR+VQIND
Sbjct: 888  ETLSPEMPLQLASDTILRMLRARLHHHCQGQIVHNLSRAINVDARLARMEERSRHVQIND 947

Query: 402  ESLCDSCHARLGTKLFAMYPDDTIVCYKCFRRQGESTSVTGRNFKQDIIFKPGWLISR 229
            ESLCDSCHARLGTKLFAMYPDDT+VCYKC+RRQGESTSV GRNFKQD++FKPGWL++R
Sbjct: 948  ESLCDSCHARLGTKLFAMYPDDTVVCYKCYRRQGESTSVKGRNFKQDVLFKPGWLVTR 1005


>ref|XP_002270724.1| PREDICTED: transforming growth factor-beta receptor-associated
            protein 1 homolog [Vitis vinifera]
            gi|302143252|emb|CBI20547.3| unnamed protein product
            [Vitis vinifera]
          Length = 1011

 Score =  313 bits (801), Expect = 3e-83
 Identities = 146/178 (82%), Positives = 166/178 (93%)
 Frame = -2

Query: 762  LKLEDSEAAEKYCVDIGRQDAYKQLLDMYLDPQDGKEPMFKAALRLLHNHGESLDPQQIL 583
            LKLEDSEAAE+YC +IGR DAY QLLDMYLDPQDGKEPMFKAA+RLLHNHGESLDP Q+L
Sbjct: 834  LKLEDSEAAEQYCAEIGRPDAYMQLLDMYLDPQDGKEPMFKAAVRLLHNHGESLDPLQVL 893

Query: 582  ETLSPDMPLWFTSSMILKMLRARVHHHCQGQVVHNLSRAINIDSKLARLGERSRNVQIND 403
            ETLSPDMPL   S  IL+MLRAR+HHH QGQ+VHNLSRA+++D++LARL ER+R+VQIND
Sbjct: 894  ETLSPDMPLQLASDTILRMLRARLHHHRQGQIVHNLSRAVDVDARLARLEERTRHVQIND 953

Query: 402  ESLCDSCHARLGTKLFAMYPDDTIVCYKCFRRQGESTSVTGRNFKQDIIFKPGWLISR 229
            ESLCDSCHARLGTKLFAMYPDD+IVCYKCFRRQGESTSVTG +FK+DI+FKPGWL++R
Sbjct: 954  ESLCDSCHARLGTKLFAMYPDDSIVCYKCFRRQGESTSVTGVDFKRDILFKPGWLVTR 1011


>ref|XP_002303701.1| predicted protein [Populus trichocarpa] gi|222841133|gb|EEE78680.1|
            predicted protein [Populus trichocarpa]
          Length = 799

 Score =  305 bits (781), Expect = 7e-81
 Identities = 143/178 (80%), Positives = 161/178 (90%)
 Frame = -2

Query: 762  LKLEDSEAAEKYCVDIGRQDAYKQLLDMYLDPQDGKEPMFKAALRLLHNHGESLDPQQIL 583
            LKLEDSEAAE+YC +IGR DAY QLLDMYLDPQ+GKEPMF AA+RLLHNHGE LDP Q+L
Sbjct: 622  LKLEDSEAAEQYCAEIGRPDAYMQLLDMYLDPQNGKEPMFNAAVRLLHNHGELLDPLQVL 681

Query: 582  ETLSPDMPLWFTSSMILKMLRARVHHHCQGQVVHNLSRAINIDSKLARLGERSRNVQIND 403
            ETLSPDMPL   S  IL+MLRAR+HHH QGQ+VHNLSRA+N+D+KLARL ERSR+VQIND
Sbjct: 682  ETLSPDMPLQLASDTILRMLRARLHHHRQGQIVHNLSRALNVDAKLARLEERSRHVQIND 741

Query: 402  ESLCDSCHARLGTKLFAMYPDDTIVCYKCFRRQGESTSVTGRNFKQDIIFKPGWLISR 229
            ESLCDSCHARLGTKLFAMYPDDT+VCYKCFRR GESTSVTG +FK+D + KPGWL++R
Sbjct: 742  ESLCDSCHARLGTKLFAMYPDDTVVCYKCFRRLGESTSVTGHDFKRDPLIKPGWLVTR 799


>ref|XP_003569134.1| PREDICTED: transforming growth factor-beta receptor-associated
            protein 1-like [Brachypodium distachyon]
          Length = 945

 Score =  276 bits (705), Expect = 5e-72
 Identities = 127/178 (71%), Positives = 152/178 (85%)
 Frame = -2

Query: 762  LKLEDSEAAEKYCVDIGRQDAYKQLLDMYLDPQDGKEPMFKAALRLLHNHGESLDPQQIL 583
            LKLEDSEAAE+YC +IGR DAY QLLD+YLDP++GKEPMF AA+RLLH HG+SLDP Q+L
Sbjct: 768  LKLEDSEAAEQYCAEIGRDDAYIQLLDLYLDPKNGKEPMFTAAVRLLHKHGKSLDPLQVL 827

Query: 582  ETLSPDMPLWFTSSMILKMLRARVHHHCQGQVVHNLSRAINIDSKLARLGERSRNVQIND 403
            E LSP+MPL   S  IL+MLRARVHHH QGQ+VHNLSRA N+D++L RL ERSR+VQ+ D
Sbjct: 828  ERLSPEMPLQLASDTILRMLRARVHHHRQGQIVHNLSRATNLDARLTRLEERSRHVQLTD 887

Query: 402  ESLCDSCHARLGTKLFAMYPDDTIVCYKCFRRQGESTSVTGRNFKQDIIFKPGWLISR 229
            ES+CDSC ARLGTKLF MYPDD++VCY+C+R QG+S S  GRNF++D IFK  WL+SR
Sbjct: 888  ESICDSCRARLGTKLFVMYPDDSVVCYRCYRNQGDSVSGRGRNFRKDAIFKQSWLVSR 945


>dbj|BAK03364.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 940

 Score =  275 bits (704), Expect = 6e-72
 Identities = 127/178 (71%), Positives = 152/178 (85%)
 Frame = -2

Query: 762  LKLEDSEAAEKYCVDIGRQDAYKQLLDMYLDPQDGKEPMFKAALRLLHNHGESLDPQQIL 583
            LKLEDSEAAE+YC +IGR DAY QLLD+YLDP++G+EPMF AA+RLLHNHG+SLDP Q+L
Sbjct: 763  LKLEDSEAAEQYCAEIGRDDAYIQLLDLYLDPKNGREPMFTAAVRLLHNHGKSLDPIQVL 822

Query: 582  ETLSPDMPLWFTSSMILKMLRARVHHHCQGQVVHNLSRAINIDSKLARLGERSRNVQIND 403
            E LS DMPL   S  IL+MLRARVHHH QGQ+VHNLSRA N+D++L RL ERSR+VQ+ D
Sbjct: 823  ERLSSDMPLQLASDTILRMLRARVHHHRQGQIVHNLSRATNVDARLTRLEERSRHVQLTD 882

Query: 402  ESLCDSCHARLGTKLFAMYPDDTIVCYKCFRRQGESTSVTGRNFKQDIIFKPGWLISR 229
            ES+CDSC ARLGTKLF MYPDD++VCY+C+R QG+S S  GRNF++D IFK  WL+SR
Sbjct: 883  ESICDSCRARLGTKLFVMYPDDSVVCYRCYRNQGDSVSGRGRNFRKDAIFKQSWLVSR 940


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