BLASTX nr result

ID: Coptis24_contig00012096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012096
         (1307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276883.2| PREDICTED: protein IWS1 homolog [Vitis vinif...   190   6e-46
emb|CAN83660.1| hypothetical protein VITISV_006539 [Vitis vinifera]   190   6e-46
ref|XP_002519849.1| Transcription factor IWS1, putative [Ricinus...   183   7e-44
ref|XP_004136208.1| PREDICTED: IWS1-like protein-like [Cucumis s...   183   1e-43
ref|XP_002303442.1| predicted protein [Populus trichocarpa] gi|2...   180   8e-43

>ref|XP_002276883.2| PREDICTED: protein IWS1 homolog [Vitis vinifera]
            gi|296086725|emb|CBI32360.3| unnamed protein product
            [Vitis vinifera]
          Length = 507

 Score =  190 bits (483), Expect = 6e-46
 Identities = 125/301 (41%), Positives = 173/301 (57%), Gaps = 19/301 (6%)
 Frame = -1

Query: 1160 TDLNAMSLGLGRHDDEPKEDL-VKSTTSFGDDNKDTDFLDLSGKTDADITLLVEQVMKEL 984
            +D  A S G     +E +ED  +K     G   K  +      K+ A+I LLVE VM EL
Sbjct: 195  SDREARSPGDAPQAEEGEEDEEIKQLFKMGKKKKKNE------KSAAEIALLVENVMAEL 248

Query: 983  NLATEEDEELEKQSKSGVNKLKKLPLLARVLSERQLQLKMIDHGVLNVLKNWIQPLPDGS 804
             +  EED EL +QSK  +NKLKKLPLL  VLS++QLQ + +DHGVL +LKNW++PLPDGS
Sbjct: 249  EVTAEEDAELNRQSKPAINKLKKLPLLTEVLSKKQLQQEFLDHGVLTLLKNWLEPLPDGS 308

Query: 803  LPDVRIRTEILEILTDFEIDLVEHS-SEQMXXXXXXXXXXXXLRSDEETTANKKLAKDLV 627
            LP++ IR  IL ILTDF IDL ++   EQ+             +SDEETTAN+KLAKDLV
Sbjct: 309  LPNINIRAAILRILTDFPIDLEQYDRREQLKKSGLGKVIMFLSKSDEETTANRKLAKDLV 368

Query: 626  YKWLQSIFCERCTDEESAIY---RWMFKRPVATQTVGREDGIQFRMTNIIRLMAKQKM-- 462
             KW + IF +    E+   +   R  F+RP A + + +  G++ R  ++      Q+   
Sbjct: 369  DKWSRPIFNKSTRFEDMRNFDDERVPFRRPSAKKPMNKAAGMESRDDDLDLADLPQERKS 428

Query: 461  --------TARRKALCMDFDVCQSRK---DVIRARAK-LIEREHRQKMKTKLKQMKVLQK 318
                     +R +A+ +DF V    K   D IRARAK +++ + R KM  KL+Q+K  +K
Sbjct: 429  GQSSSRLHASRPEAMPLDFIVRPQSKIDPDEIRARAKQVVQDQRRLKMNKKLQQLKAPKK 488

Query: 317  K 315
            K
Sbjct: 489  K 489


>emb|CAN83660.1| hypothetical protein VITISV_006539 [Vitis vinifera]
          Length = 508

 Score =  190 bits (483), Expect = 6e-46
 Identities = 125/301 (41%), Positives = 173/301 (57%), Gaps = 19/301 (6%)
 Frame = -1

Query: 1160 TDLNAMSLGLGRHDDEPKEDL-VKSTTSFGDDNKDTDFLDLSGKTDADITLLVEQVMKEL 984
            +D  A S G     +E +ED  +K     G   K  +      K+ A+I LLVE VM EL
Sbjct: 196  SDREARSPGDAPQAEEGEEDEEIKQLFKMGKKKKKNE------KSAAEIALLVENVMAEL 249

Query: 983  NLATEEDEELEKQSKSGVNKLKKLPLLARVLSERQLQLKMIDHGVLNVLKNWIQPLPDGS 804
             +  EED EL +QSK  +NKLKKLPLL  VLS++QLQ + +DHGVL +LKNW++PLPDGS
Sbjct: 250  EVTAEEDAELNRQSKPAINKLKKLPLLTEVLSKKQLQQEFLDHGVLTLLKNWLEPLPDGS 309

Query: 803  LPDVRIRTEILEILTDFEIDLVEHS-SEQMXXXXXXXXXXXXLRSDEETTANKKLAKDLV 627
            LP++ IR  IL ILTDF IDL ++   EQ+             +SDEETTAN+KLAKDLV
Sbjct: 310  LPNINIRAAILRILTDFPIDLEQYDRREQLKKSGLGKVIMFLSKSDEETTANRKLAKDLV 369

Query: 626  YKWLQSIFCERCTDEESAIY---RWMFKRPVATQTVGREDGIQFRMTNIIRLMAKQKM-- 462
             KW + IF +    E+   +   R  F+RP A + + +  G++ R  ++      Q+   
Sbjct: 370  DKWSRPIFNKSTRFEDMRNFDDERVPFRRPSAKKPMNKAAGMESRDDDLDLADLPQERKS 429

Query: 461  --------TARRKALCMDFDVCQSRK---DVIRARAK-LIEREHRQKMKTKLKQMKVLQK 318
                     +R +A+ +DF V    K   D IRARAK +++ + R KM  KL+Q+K  +K
Sbjct: 430  GQSSSRLHASRPEAMPLDFIVRPQSKIDPDEIRARAKQVVQDQRRLKMNKKLQQLKAPKK 489

Query: 317  K 315
            K
Sbjct: 490  K 490


>ref|XP_002519849.1| Transcription factor IWS1, putative [Ricinus communis]
            gi|223540895|gb|EEF42453.1| Transcription factor IWS1,
            putative [Ricinus communis]
          Length = 500

 Score =  183 bits (465), Expect = 7e-44
 Identities = 117/293 (39%), Positives = 168/293 (57%), Gaps = 24/293 (8%)
 Frame = -1

Query: 1121 DDEPKEDLVKSTTSFGDDNKDTDFLDLSGK-------TDADITLLVEQVMKELNLATEED 963
            D+EP+          G+++++   L   GK       + A+I LLVE VM EL +  EED
Sbjct: 190  DNEPRSPTDAPQAEEGEEDEEIKELFKMGKKKKKNEKSPAEIALLVENVMAELEVTAEED 249

Query: 962  EELEKQSKSGVNKLKKLPLLARVLSERQLQLKMIDHGVLNVLKNWIQPLPDGSLPDVRIR 783
             EL ++ K  + KLKKLPLL  VLS++QLQ + IDHGVL +LKNW++PLPDGSLP++ IR
Sbjct: 250  AELNRRGKPAITKLKKLPLLTEVLSKKQLQQEFIDHGVLTLLKNWLEPLPDGSLPNINIR 309

Query: 782  TEILEILTDFEIDLVEHS-SEQMXXXXXXXXXXXXLRSDEETTANKKLAKDLVYKWLQSI 606
              IL+ILTDF IDL ++   EQ+             +SDEETT+N+KLAKDLV KW + I
Sbjct: 310  AAILKILTDFPIDLEQYDRREQLKKSGLGKVIMFLSKSDEETTSNRKLAKDLVDKWSRPI 369

Query: 605  F--CERCTDEESAIYRWMFKRPVATQTVGREDGIQFRMTNII----------RLMAKQKM 462
            F    R  D  +      F+RP   + V    G++ R  ++           +  A+Q+ 
Sbjct: 370  FNKSTRFEDMRNIDDDRAFRRPTVRRPVNNSAGMESRDGDLDLDISRERRSGQSSARQQH 429

Query: 461  TARRKALCMDFDVCQSRK---DVIRARAK-LIEREHRQKMKTKLKQMKVLQKK 315
             +R +A  +DF V    K   + +RARAK +++ + R KM  KL+Q+K  +KK
Sbjct: 430  ASRPEATPLDFLVRPQSKIDPEEVRARAKQVVQDQRRLKMNKKLQQLKAPKKK 482


>ref|XP_004136208.1| PREDICTED: IWS1-like protein-like [Cucumis sativus]
            gi|449508046|ref|XP_004163201.1| PREDICTED: IWS1-like
            protein-like [Cucumis sativus]
          Length = 509

 Score =  183 bits (464), Expect = 1e-43
 Identities = 117/294 (39%), Positives = 170/294 (57%), Gaps = 25/294 (8%)
 Frame = -1

Query: 1121 DDEPKEDLVKSTTSFGDDNKDTDFLDLSGK-------TDADITLLVEQVMKELNLATEED 963
            DDEP+          G+++ + + L   GK       + A+I LLVE VM EL +  EED
Sbjct: 198  DDEPRSPRYAPEAEEGEEDDEINELFKVGKKKKKNEKSPAEIALLVENVMAELEVTAEED 257

Query: 962  EELEKQSKSGVNKLKKLPLLARVLSERQLQLKMIDHGVLNVLKNWIQPLPDGSLPDVRIR 783
             +L +Q K  VNKLKKLPLL  VLS++QLQ + +DHGVL +LKNW++PLPDGSLP++ IR
Sbjct: 258  ADLNRQGKPAVNKLKKLPLLTDVLSKKQLQQEFLDHGVLTLLKNWLEPLPDGSLPNINIR 317

Query: 782  TEILEILTDFEIDLVEHS-SEQMXXXXXXXXXXXXLRSDEETTANKKLAKDLVYKWLQSI 606
              IL+ILTDF IDL ++   EQ+             +SDEETT+N+KLAKDLV +W + I
Sbjct: 318  EAILKILTDFPIDLEQYDRREQLKKSGLGKVIMFLSKSDEETTSNRKLAKDLVDQWSRPI 377

Query: 605  FCERCTDEESAIY---RWMFKRPVATQTVGREDGIQFRMTNI----------IRLMAKQK 465
            F +    E+       R  F+RP+A ++  +  G++ R  ++              + ++
Sbjct: 378  FNKSTRFEDMRNVEDERVPFRRPLAKKSGNKAAGMESRDGDLDLDEFSQGRKSGQSSSRQ 437

Query: 464  MTARRKALCMDFDVCQSRK---DVIRARAK-LIEREHRQKMKTKLKQMKVLQKK 315
              +R +A  +DF +    K   D IRARAK  ++ + R KM  KL+Q+K  +KK
Sbjct: 438  HASRPEATPLDFVIRPQSKIDPDEIRARAKQAVQDQRRMKMNKKLQQLKAPKKK 491


>ref|XP_002303442.1| predicted protein [Populus trichocarpa] gi|222840874|gb|EEE78421.1|
            predicted protein [Populus trichocarpa]
          Length = 353

 Score =  180 bits (456), Expect = 8e-43
 Identities = 115/292 (39%), Positives = 168/292 (57%), Gaps = 23/292 (7%)
 Frame = -1

Query: 1121 DDEPKEDLVKSTTSFGDDNKDTDFLDLSGK-------TDADITLLVEQVMKELNLATEED 963
            D+EP+          G+++++   +   GK       + A+I LLVE VM EL +  EED
Sbjct: 44   DNEPRSPTDAPQAEEGEEDEEIKDMFKMGKKRKKNEKSPAEIALLVENVMAELEVTAEED 103

Query: 962  EELEKQSKSGVNKLKKLPLLARVLSERQLQLKMIDHGVLNVLKNWIQPLPDGSLPDVRIR 783
             +L +Q K  VNKLKKLPLL  VLS++QLQ + IDHGVL +LKNW++PLPDGSLP++ IR
Sbjct: 104  ADLNRQGKPAVNKLKKLPLLTEVLSKKQLQQEFIDHGVLTLLKNWLEPLPDGSLPNINIR 163

Query: 782  TEILEILTDFEIDLVEHS-SEQMXXXXXXXXXXXXLRSDEETTANKKLAKDLVYKWLQSI 606
              IL+ILTDF IDL ++   EQ+             +SDEETT+N+KLAKDLV KW + I
Sbjct: 164  AAILKILTDFPIDLEQYDRREQLKKSGLGKVIMFLSKSDEETTSNRKLAKDLVDKWSRPI 223

Query: 605  F--CERCTDEESAIYRWMFKRPVATQTVGREDGIQFRMTNIIRLMAKQKMT--------- 459
            F    R  D  +      F+RP   +      G+  R  ++   +++++ +         
Sbjct: 224  FNKSTRFEDMRNVEDDRAFRRPTVRRPSNNSAGMSSRDGDLDLDISRERKSSQSSDRQHA 283

Query: 458  ARRKALCMDFDVCQSRK---DVIRARAK-LIEREHRQKMKTKLKQMKVLQKK 315
            +R +A  +DF V    K   + +RARAK +++ + R KM  KL+Q+K  +KK
Sbjct: 284  SRPEATPLDFLVRPQSKIDPEEVRARAKQVVQDQRRLKMNKKLQQLKGPKKK 335


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