BLASTX nr result
ID: Coptis24_contig00011843
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00011843 (854 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN77684.1| hypothetical protein VITISV_040766 [Vitis vinifera] 228 1e-57 ref|XP_002283854.1| PREDICTED: transportin-3 [Vitis vinifera] gi... 227 2e-57 gb|AAX95769.2| hypothetical protein LES1_20t00006 [Solanum lycop... 220 4e-55 ref|XP_002511481.1| transportin, putative [Ricinus communis] gi|... 217 2e-54 ref|XP_002318009.1| predicted protein [Populus trichocarpa] gi|2... 216 4e-54 >emb|CAN77684.1| hypothetical protein VITISV_040766 [Vitis vinifera] Length = 798 Score = 228 bits (581), Expect = 1e-57 Identities = 113/157 (71%), Positives = 135/157 (85%) Frame = +1 Query: 1 GITIQHREACSSILTFLSDVFDLGNSTLGEQYKSVRDNVVVPRGPSLTRILIASLTGALP 180 G+T+QHREA +SILTFLSD+FDL ++ GEQY+S+RD V++PRG S+TRILIA LTGALP Sbjct: 641 GVTVQHREASNSILTFLSDIFDLAKTSPGEQYQSIRDTVIIPRGASITRILIACLTGALP 700 Query: 181 RSRLEAVTCSLLSLTRAYDFKSLEWAKQSISLIPLAAVTEVEKTRFLQSLSEAASGADSS 360 SRLE VT +LL+LTRAY K++EWAK ISL+PL AVTEVE+TRFLQ+LS A+GAD + Sbjct: 701 SSRLETVTYALLALTRAYGMKAVEWAKDCISLVPLTAVTEVERTRFLQTLSNVATGADIN 760 Query: 361 ALTVAVEELSDVCRRNRAVQEIVHGALRPLELNLAPV 471 LTV++EELSDVCRRNR VQEIV GALRP ELNLAPV Sbjct: 761 TLTVSMEELSDVCRRNRTVQEIVQGALRPXELNLAPV 797 >ref|XP_002283854.1| PREDICTED: transportin-3 [Vitis vinifera] gi|297733855|emb|CBI15102.3| unnamed protein product [Vitis vinifera] Length = 960 Score = 227 bits (579), Expect = 2e-57 Identities = 113/157 (71%), Positives = 135/157 (85%) Frame = +1 Query: 1 GITIQHREACSSILTFLSDVFDLGNSTLGEQYKSVRDNVVVPRGPSLTRILIASLTGALP 180 G+T+QHREA +SILTFLSD+FDL ++ GEQY+S+RD V++PRG S+TRILIA LTGALP Sbjct: 803 GVTVQHREASNSILTFLSDIFDLAKTSPGEQYQSIRDTVIIPRGASITRILIACLTGALP 862 Query: 181 RSRLEAVTCSLLSLTRAYDFKSLEWAKQSISLIPLAAVTEVEKTRFLQSLSEAASGADSS 360 SRLE VT +LL+LTRAY K++EWAK ISL+PL AVTEVE+TRFLQ+LS A+GAD + Sbjct: 863 SSRLETVTYALLALTRAYGMKAVEWAKDCISLVPLTAVTEVERTRFLQTLSNVATGADIN 922 Query: 361 ALTVAVEELSDVCRRNRAVQEIVHGALRPLELNLAPV 471 LTV++EELSDVCRRNR VQEIV GALRP ELNLAPV Sbjct: 923 TLTVSMEELSDVCRRNRTVQEIVQGALRPHELNLAPV 959 >gb|AAX95769.2| hypothetical protein LES1_20t00006 [Solanum lycopersicum] Length = 618 Score = 220 bits (560), Expect = 4e-55 Identities = 106/157 (67%), Positives = 134/157 (85%) Frame = +1 Query: 1 GITIQHREACSSILTFLSDVFDLGNSTLGEQYKSVRDNVVVPRGPSLTRILIASLTGALP 180 GIT+QHREAC+SIL F+SD+FDL NST GE S+RD+V++PRGP++TRIL+A LTGALP Sbjct: 461 GITVQHREACNSILNFVSDIFDLSNSTNGESCLSIRDSVIIPRGPTITRILVACLTGALP 520 Query: 181 RSRLEAVTCSLLSLTRAYDFKSLEWAKQSISLIPLAAVTEVEKTRFLQSLSEAASGADSS 360 SRLE VT +LL+LTRAY K+LEWAK+ +SLIP AVTE+E+TRFLQ+LS+AASGA+ + Sbjct: 521 SSRLETVTYALLALTRAYGLKALEWAKECVSLIPSTAVTELERTRFLQALSDAASGANMN 580 Query: 361 ALTVAVEELSDVCRRNRAVQEIVHGALRPLELNLAPV 471 L V ++E+S+VCRRNR VQEIV GALRPL+LN+ V Sbjct: 581 GLVVPIDEISEVCRRNRTVQEIVQGALRPLDLNIVAV 617 >ref|XP_002511481.1| transportin, putative [Ricinus communis] gi|223550596|gb|EEF52083.1| transportin, putative [Ricinus communis] Length = 967 Score = 217 bits (553), Expect = 2e-54 Identities = 109/157 (69%), Positives = 131/157 (83%) Frame = +1 Query: 1 GITIQHREACSSILTFLSDVFDLGNSTLGEQYKSVRDNVVVPRGPSLTRILIASLTGALP 180 GIT+QHREA +SILTFLSD+FDL S++GE Y SVRD+V++PRG S+TRIL+ASLTGALP Sbjct: 810 GITVQHREASNSILTFLSDIFDLAKSSVGEHYLSVRDSVIIPRGASITRILVASLTGALP 869 Query: 181 RSRLEAVTCSLLSLTRAYDFKSLEWAKQSISLIPLAAVTEVEKTRFLQSLSEAASGADSS 360 SR+E V +LL++TR Y +++EWA +SISLIPL AVTEVE+ RF Q+LS+AASG D + Sbjct: 870 SSRIETVAYALLAVTRTYGARAVEWAMESISLIPLTAVTEVERARFFQALSDAASGIDVN 929 Query: 361 ALTVAVEELSDVCRRNRAVQEIVHGALRPLELNLAPV 471 AL VEELSDVCRRNR VQEIV GALRPLELNL V Sbjct: 930 ALMAPVEELSDVCRRNRTVQEIVQGALRPLELNLVTV 966 >ref|XP_002318009.1| predicted protein [Populus trichocarpa] gi|222858682|gb|EEE96229.1| predicted protein [Populus trichocarpa] Length = 554 Score = 216 bits (551), Expect = 4e-54 Identities = 107/157 (68%), Positives = 131/157 (83%) Frame = +1 Query: 1 GITIQHREACSSILTFLSDVFDLGNSTLGEQYKSVRDNVVVPRGPSLTRILIASLTGALP 180 G+T+QHREA +SILTFLSD+FDL S++GEQY ++RD+V++PRG S+TRIL+ASLTGALP Sbjct: 397 GVTVQHREASNSILTFLSDIFDLAKSSMGEQYLTIRDSVIIPRGSSITRILVASLTGALP 456 Query: 181 RSRLEAVTCSLLSLTRAYDFKSLEWAKQSISLIPLAAVTEVEKTRFLQSLSEAASGADSS 360 SRLE VT +LL+LTRAY +LEWA++S+SLIP VTEVE+T+ Q+L++AASG D Sbjct: 457 SSRLETVTYALLALTRAYGASALEWARESVSLIPSTVVTEVEQTKIFQALTDAASGVDIK 516 Query: 361 ALTVAVEELSDVCRRNRAVQEIVHGALRPLELNLAPV 471 L AVEELSDVCRRNR VQEIV GALRPLELNL V Sbjct: 517 TLMGAVEELSDVCRRNRTVQEIVQGALRPLELNLVTV 553