BLASTX nr result

ID: Coptis24_contig00011817 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011817
         (1312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37029.3| unnamed protein product [Vitis vinifera]              343   6e-92
ref|XP_002280535.1| PREDICTED: uncharacterized protein LOC100250...   342   1e-91
ref|XP_002320248.1| predicted protein [Populus trichocarpa] gi|2...   336   9e-90
ref|XP_002519363.1| Protein C9orf78, putative [Ricinus communis]...   330   4e-88
ref|XP_003518101.1| PREDICTED: uncharacterized protein C9orf78 h...   326   9e-87

>emb|CBI37029.3| unnamed protein product [Vitis vinifera]
          Length = 298

 Score =  343 bits (880), Expect = 6e-92
 Identities = 187/279 (67%), Positives = 216/279 (77%)
 Frame = -3

Query: 1268 LIRSLLRKFLNMRRKNFRKXXXXXXXXXXXXXXXXXXXXRMALEEIKFLQKQRERKSGIA 1089
            L R++L K   M++KNFRK                    R+ALEE+KFLQKQRERK GI 
Sbjct: 20   LSRTVLGK--EMQKKNFRKRSIEDDQAKDNNNSEDEEERRLALEEVKFLQKQRERKLGIP 77

Query: 1088 AILSLNNQTDGVIGHLKSSTDKNSNEGVGLGSGDGEKEELVLQDTFAQETAVLEEDPNML 909
            AI +L  QT GV    K   +KN          DG+KEELVLQDTFAQETAV+ EDPNML
Sbjct: 78   AIPTL--QTTGVTP-TKKVAEKNEVP-------DGDKEELVLQDTFAQETAVMVEDPNML 127

Query: 908  KYVEQELAKKKGKNIDAADQVENDLKRAEDELYIIPEHLKVKKRNSEESSTQWTTGIAEI 729
            KYVEQELAKK+G+NIDA +QV NDLKRA+DELY++PEHLKVK+RNSEESSTQWTTGIAE+
Sbjct: 128  KYVEQELAKKRGRNIDATNQVGNDLKRADDELYVVPEHLKVKRRNSEESSTQWTTGIAEV 187

Query: 728  QLPIEYKLRNIEETEAAKKVLQEKRLVGRTKTELSIPASYSADYFQRGKDYAEKLRREHP 549
            QLP+EYKLRNIEETEAAKK+LQ+KRL+GRTKTE +IP+SYSADYFQRG+DYAEKLRREHP
Sbjct: 188  QLPVEYKLRNIEETEAAKKLLQDKRLMGRTKTEFNIPSSYSADYFQRGRDYAEKLRREHP 247

Query: 548  ELYKDKNASENGAAARPAEASNNDAAGRRQAATDELMLD 432
            ELYKDK   +NG  +R  +AS  + AGRRQAATDE MLD
Sbjct: 248  ELYKDKGVQDNGGGSRLPDAS-TEVAGRRQAATDEFMLD 285


>ref|XP_002280535.1| PREDICTED: uncharacterized protein LOC100250416 [Vitis vinifera]
          Length = 270

 Score =  342 bits (877), Expect = 1e-91
 Identities = 183/268 (68%), Positives = 210/268 (78%)
 Frame = -3

Query: 1235 MRRKNFRKXXXXXXXXXXXXXXXXXXXXRMALEEIKFLQKQRERKSGIAAILSLNNQTDG 1056
            M++KNFRK                    R+ALEE+KFLQKQRERK GI AI +L  QT G
Sbjct: 1    MQKKNFRKRSIEDDQAKDNNNSEDEEERRLALEEVKFLQKQRERKLGIPAIPTL--QTTG 58

Query: 1055 VIGHLKSSTDKNSNEGVGLGSGDGEKEELVLQDTFAQETAVLEEDPNMLKYVEQELAKKK 876
            V    K   +KN          DG+KEELVLQDTFAQETAV+ EDPNMLKYVEQELAKK+
Sbjct: 59   VTP-TKKVAEKNEVP-------DGDKEELVLQDTFAQETAVMVEDPNMLKYVEQELAKKR 110

Query: 875  GKNIDAADQVENDLKRAEDELYIIPEHLKVKKRNSEESSTQWTTGIAEIQLPIEYKLRNI 696
            G+NIDA +QV NDLKRA+DELY++PEHLKVK+RNSEESSTQWTTGIAE+QLP+EYKLRNI
Sbjct: 111  GRNIDATNQVGNDLKRADDELYVVPEHLKVKRRNSEESSTQWTTGIAEVQLPVEYKLRNI 170

Query: 695  EETEAAKKVLQEKRLVGRTKTELSIPASYSADYFQRGKDYAEKLRREHPELYKDKNASEN 516
            EETEAAKK+LQ+KRL+GRTKTE +IP+SYSADYFQRG+DYAEKLRREHPELYKDK   +N
Sbjct: 171  EETEAAKKLLQDKRLMGRTKTEFNIPSSYSADYFQRGRDYAEKLRREHPELYKDKGVQDN 230

Query: 515  GAAARPAEASNNDAAGRRQAATDELMLD 432
            G  +R  +AS  + AGRRQAATDE MLD
Sbjct: 231  GGGSRLPDAS-TEVAGRRQAATDEFMLD 257


>ref|XP_002320248.1| predicted protein [Populus trichocarpa] gi|222861021|gb|EEE98563.1|
            predicted protein [Populus trichocarpa]
          Length = 271

 Score =  336 bits (861), Expect = 9e-90
 Identities = 172/239 (71%), Positives = 195/239 (81%)
 Frame = -3

Query: 1148 MALEEIKFLQKQRERKSGIAAILSLNNQTDGVIGHLKSSTDKNSNEGVGLGSGDGEKEEL 969
            +ALEE+KFLQKQRERKSGI A+ + +     V   L    D           GDGEKEEL
Sbjct: 31   LALEEVKFLQKQRERKSGIPALATTSQTATTVAAKLTEKAD-----------GDGEKEEL 79

Query: 968  VLQDTFAQETAVLEEDPNMLKYVEQELAKKKGKNIDAADQVENDLKRAEDELYIIPEHLK 789
            VLQDTFAQETAV+ EDPNML+YVEQELAKK+GKNIDA DQVE +LKRAEDELY IPEHLK
Sbjct: 80   VLQDTFAQETAVMVEDPNMLQYVEQELAKKRGKNIDATDQVETELKRAEDELYKIPEHLK 139

Query: 788  VKKRNSEESSTQWTTGIAEIQLPIEYKLRNIEETEAAKKVLQEKRLVGRTKTELSIPASY 609
            VKKRNSEESSTQWTTGIAE+QLPIEYKLRNIEETEAAKK+LQEKRL+GR K+E SIP+SY
Sbjct: 140  VKKRNSEESSTQWTTGIAEVQLPIEYKLRNIEETEAAKKLLQEKRLMGRPKSEFSIPSSY 199

Query: 608  SADYFQRGKDYAEKLRREHPELYKDKNASENGAAARPAEASNNDAAGRRQAATDELMLD 432
            SADYFQRG+DYAEKLRR+HPELYKD++  ++  A      ++ DAAGRRQAATDE ML+
Sbjct: 200  SADYFQRGRDYAEKLRRDHPELYKDRSLQDDAVAGSKPADNSTDAAGRRQAATDEFMLE 258


>ref|XP_002519363.1| Protein C9orf78, putative [Ricinus communis]
            gi|223541430|gb|EEF42980.1| Protein C9orf78, putative
            [Ricinus communis]
          Length = 293

 Score =  330 bits (847), Expect = 4e-88
 Identities = 172/245 (70%), Positives = 200/245 (81%), Gaps = 6/245 (2%)
 Frame = -3

Query: 1148 MALEEIKFLQKQRERKSGIAAILSLNNQTDGVIGHLKSSTDKNSNEGVGL------GSGD 987
            +ALEE+KFLQKQRERKSGI AIL+ ++          +   +NS+  V          GD
Sbjct: 39   LALEEVKFLQKQRERKSGIPAILTPSSSASSSAAAAAAQLQQNSSGLVSSKKVTEKNDGD 98

Query: 986  GEKEELVLQDTFAQETAVLEEDPNMLKYVEQELAKKKGKNIDAADQVENDLKRAEDELYI 807
            GEKE+LVLQDTFAQETAV+ EDPNML YVEQELAKK GKN+DA  QVEN+LKRAEDELY 
Sbjct: 99   GEKEDLVLQDTFAQETAVMVEDPNMLMYVEQELAKKSGKNVDAT-QVENELKRAEDELYT 157

Query: 806  IPEHLKVKKRNSEESSTQWTTGIAEIQLPIEYKLRNIEETEAAKKVLQEKRLVGRTKTEL 627
            IPEHLKVK+RNSEESSTQWTTGIAE+QLPIEYKL+NIEETEAAKK+LQEKRL+GR K+E 
Sbjct: 158  IPEHLKVKRRNSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAKKLLQEKRLMGRAKSEF 217

Query: 626  SIPASYSADYFQRGKDYAEKLRREHPELYKDKNASENGAAARPAEASNNDAAGRRQAATD 447
            SIP+SYSADYFQRG+DYAEKLRREHPELYKD+N+ +  A ++PA+  NN  A RR+AATD
Sbjct: 218  SIPSSYSADYFQRGRDYAEKLRREHPELYKDRNSQDESAGSKPAD--NNTDATRREAATD 275

Query: 446  ELMLD 432
            E ML+
Sbjct: 276  EFMLE 280


>ref|XP_003518101.1| PREDICTED: uncharacterized protein C9orf78 homolog [Glycine max]
          Length = 287

 Score =  326 bits (835), Expect = 9e-87
 Identities = 170/241 (70%), Positives = 202/241 (83%), Gaps = 2/241 (0%)
 Frame = -3

Query: 1148 MALEEIKFLQKQRERKSGIAAILSLNNQTDGVIGHLKSSTDKNSNEGVGLGSGDGEKEEL 969
            MALEEIK LQKQRERKSGI A  SL  Q+    G    + +KN  +G       GEK+EL
Sbjct: 42   MALEEIKLLQKQRERKSGIPANPSLQVQSGTGGGLAAKAAEKNDGDG-------GEKDEL 94

Query: 968  VLQDTFAQETAVLEEDPNMLKYVEQELAKKKGKNIDAADQVENDLKRAEDELYIIPEHLK 789
            VLQDTFAQETAV++EDPNM+KY+E ELAKK+G+ IDAADQVEN+LKRAEDELY IPEHLK
Sbjct: 95   VLQDTFAQETAVMDEDPNMVKYIEHELAKKRGRKIDAADQVENELKRAEDELYKIPEHLK 154

Query: 788  VKKRNSEESSTQWTTGIAEIQLPIEYKLRNIEETEAAKKVLQEKRLVGRTKTELSIPASY 609
            VK+RNSEESSTQWTTGIAE+QLPIEYKL+NIEETEAAKK+LQEKRL+GRTK++ SIP+SY
Sbjct: 155  VKRRNSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAKKLLQEKRLMGRTKSDFSIPSSY 214

Query: 608  SADYFQRGKDYAEKLRREHPELYKDKNASENGAAARPAEASNNDAAG--RRQAATDELML 435
            SADYFQRG+DYAEKLRREHPELYKD++  ++ + ++  + S+ DAAG  +RQAATDE ML
Sbjct: 215  SADYFQRGRDYAEKLRREHPELYKDRSHQDDSSGSKQND-SSTDAAGAVQRQAATDEFML 273

Query: 434  D 432
            +
Sbjct: 274  E 274


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