BLASTX nr result

ID: Coptis24_contig00011778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011778
         (971 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514068.1| Charged multivesicular body protein 2a, puta...   369   e-100
ref|XP_002330482.1| predicted protein [Populus trichocarpa] gi|2...   366   4e-99
gb|AFK39133.1| unknown [Lotus japonicus]                              365   9e-99
ref|XP_002299595.1| predicted protein [Populus trichocarpa] gi|2...   362   7e-98
ref|XP_002280053.1| PREDICTED: vacuolar protein sorting-associat...   361   1e-97

>ref|XP_002514068.1| Charged multivesicular body protein 2a, putative [Ricinus communis]
           gi|223546524|gb|EEF48022.1| Charged multivesicular body
           protein 2a, putative [Ricinus communis]
          Length = 223

 Score =  369 bits (947), Expect = e-100
 Identities = 193/223 (86%), Positives = 202/223 (90%)
 Frame = +2

Query: 155 MSFLFGRRKTPAELLRENKRMIDKSIREIERERQGLQTQEKKLIVEIKKSAKQGQMGAVK 334
           MSFLFG+RKTPAELLRENKRM+DKSIREIERERQGLQTQEKKLI EIKKSAKQGQMGAVK
Sbjct: 1   MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLIAEIKKSAKQGQMGAVK 60

Query: 335 VMAKDLIRTRHQVEKFYKLKSQLQGVALRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 514
           VMAKDLIRTRHQ+EKFYKLKSQLQGV+LRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP
Sbjct: 61  VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120

Query: 515 SLQKIMQEFERQNEKMEMTTEVMGDAIDDALXXXXXXXXXXXLVSQVLDEIGININNELV 694
           SLQKIMQEFERQNEKMEM TEVMGDAIDDAL           LVSQVLDEIGI+IN ELV
Sbjct: 121 SLQKIMQEFERQNEKMEMVTEVMGDAIDDALEGDEEEEETEELVSQVLDEIGIDINQELV 180

Query: 695 NAPASAVAVPTANNKVAQAEPSATEDGGIDNDLQARLDNLRRM 823
           NAP+SAVA P A  KVAQAE + T+D GID+DLQARLDNLRRM
Sbjct: 181 NAPSSAVAAPAAKGKVAQAEATGTDDSGIDSDLQARLDNLRRM 223


>ref|XP_002330482.1| predicted protein [Populus trichocarpa] gi|222872416|gb|EEF09547.1|
           predicted protein [Populus trichocarpa]
          Length = 223

 Score =  366 bits (940), Expect = 4e-99
 Identities = 190/223 (85%), Positives = 201/223 (90%)
 Frame = +2

Query: 155 MSFLFGRRKTPAELLRENKRMIDKSIREIERERQGLQTQEKKLIVEIKKSAKQGQMGAVK 334
           MSFLFG++KTPAELLRENKRM+DKSIREIERERQGLQTQEKKLI EIKKSAKQGQMGAVK
Sbjct: 1   MSFLFGKKKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLIAEIKKSAKQGQMGAVK 60

Query: 335 VMAKDLIRTRHQVEKFYKLKSQLQGVALRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 514
           VMAKDLIRTRHQ+EKFYKLKSQLQGV+LRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP
Sbjct: 61  VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120

Query: 515 SLQKIMQEFERQNEKMEMTTEVMGDAIDDALXXXXXXXXXXXLVSQVLDEIGININNELV 694
           SLQKIMQEFERQNEKMEM TEVMGDAIDDAL           LV+QVLDEIGI++N ELV
Sbjct: 121 SLQKIMQEFERQNEKMEMVTEVMGDAIDDALEGDEEEEETEDLVNQVLDEIGIDVNQELV 180

Query: 695 NAPASAVAVPTANNKVAQAEPSATEDGGIDNDLQARLDNLRRM 823
           NAP+SAVA P A  KVAQ E +  EDGGID+DLQARLDNLRRM
Sbjct: 181 NAPSSAVAAPAAKGKVAQVETTGNEDGGIDSDLQARLDNLRRM 223


>gb|AFK39133.1| unknown [Lotus japonicus]
          Length = 223

 Score =  365 bits (937), Expect = 9e-99
 Identities = 187/223 (83%), Positives = 204/223 (91%)
 Frame = +2

Query: 155 MSFLFGRRKTPAELLRENKRMIDKSIREIERERQGLQTQEKKLIVEIKKSAKQGQMGAVK 334
           MSF+FG+RKTPAELLRENKRM+DKSIREIERERQGLQ QEKKLI+EIKKSAKQGQMGAV+
Sbjct: 1   MSFIFGKRKTPAELLRENKRMLDKSIREIERERQGLQAQEKKLILEIKKSAKQGQMGAVR 60

Query: 335 VMAKDLIRTRHQVEKFYKLKSQLQGVALRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 514
           VMAKDL+RTRHQVEKFYKLKSQLQGV+LRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP
Sbjct: 61  VMAKDLVRTRHQVEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120

Query: 515 SLQKIMQEFERQNEKMEMTTEVMGDAIDDALXXXXXXXXXXXLVSQVLDEIGININNELV 694
           SLQKIMQEFERQNEKME+TTEVMGDAIDDAL           LV+QVLDEIGIN+N EL+
Sbjct: 121 SLQKIMQEFERQNEKMELTTEVMGDAIDDALEGDEEEEETDDLVNQVLDEIGINVNQELL 180

Query: 695 NAPASAVAVPTANNKVAQAEPSATEDGGIDNDLQARLDNLRRM 823
           NAP+SAVA P A+ KV Q E +AT+DGGID+DLQARLDNLR+M
Sbjct: 181 NAPSSAVAAPAASTKVPQVETAATDDGGIDSDLQARLDNLRKM 223


>ref|XP_002299595.1| predicted protein [Populus trichocarpa] gi|222846853|gb|EEE84400.1|
           predicted protein [Populus trichocarpa]
          Length = 226

 Score =  362 bits (929), Expect = 7e-98
 Identities = 190/226 (84%), Positives = 205/226 (90%), Gaps = 3/226 (1%)
 Frame = +2

Query: 155 MSFLFGRRKTPAELLRENKRMIDKSIREIERERQGLQTQEKKLIVEIKKSAKQGQMGAVK 334
           MSFLFG+RKTP+ELLRENKRM+DKSIREIERERQGLQTQEKKLIVEIKK+AKQGQMGAV+
Sbjct: 1   MSFLFGKRKTPSELLRENKRMMDKSIREIERERQGLQTQEKKLIVEIKKNAKQGQMGAVR 60

Query: 335 VMAKDLIRTRHQVEKFYKLKSQLQGVALRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 514
           VMAKDLIRTRHQ+EKFYKLKSQLQGVALRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP
Sbjct: 61  VMAKDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120

Query: 515 SLQKIMQEFERQNEKMEMTTEVMGDAIDDALXXXXXXXXXXXLVSQVLDEIGININNELV 694
           SLQKIMQEFERQNEKMEMT+EVMGDAIDDAL           LV+QVLDEIGI INNELV
Sbjct: 121 SLQKIMQEFERQNEKMEMTSEVMGDAIDDALEGDEEEEETEELVNQVLDEIGIGINNELV 180

Query: 695 NAPASAVAVPTANNKVAQAEPSATED---GGIDNDLQARLDNLRRM 823
           NAP++AV+VP A NKVAQAE +   +   GGID+DLQARLDNLR+M
Sbjct: 181 NAPSAAVSVPAAKNKVAQAESTGNHEDGGGGIDDDLQARLDNLRKM 226


>ref|XP_002280053.1| PREDICTED: vacuolar protein sorting-associated protein 2 homolog 1
           [Vitis vinifera] gi|297738592|emb|CBI27837.3| unnamed
           protein product [Vitis vinifera]
          Length = 226

 Score =  361 bits (927), Expect = 1e-97
 Identities = 190/226 (84%), Positives = 203/226 (89%), Gaps = 3/226 (1%)
 Frame = +2

Query: 155 MSFLFGRRKTPAELLRENKRMIDKSIREIERERQGLQTQEKKLIVEIKKSAKQGQMGAVK 334
           MSFLFG++KTPAELLRENKRM+DKSIREIERERQGLQ QEKKLIVEIKKSAKQGQMGAVK
Sbjct: 1   MSFLFGKKKTPAELLRENKRMLDKSIREIERERQGLQAQEKKLIVEIKKSAKQGQMGAVK 60

Query: 335 VMAKDLIRTRHQVEKFYKLKSQLQGVALRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 514
           VMAKDLIRTRHQ+EKFYKLKSQLQGVALRIQTLKSTQAMG+AMKGVTKAMGQMNRQMNLP
Sbjct: 61  VMAKDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMGQAMKGVTKAMGQMNRQMNLP 120

Query: 515 SLQKIMQEFERQNEKMEMTTEVMGDAIDDALXXXXXXXXXXXLVSQVLDEIGININNELV 694
           SLQKIMQEFERQNEKMEMT EVMGDA+DDAL           LVSQVLDEIGI+I +EL+
Sbjct: 121 SLQKIMQEFERQNEKMEMTMEVMGDAVDDALEGDEEEEETEELVSQVLDEIGIDIKSELL 180

Query: 695 NAPASAVAVPTANNKVAQAEPSAT---EDGGIDNDLQARLDNLRRM 823
           NAP++AVA P A NKVAQAE + T   +D GIDNDLQARLDNLRRM
Sbjct: 181 NAPSAAVAAPAAKNKVAQAEATGTTGNDDSGIDNDLQARLDNLRRM 226


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