BLASTX nr result

ID: Coptis24_contig00011746 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011746
         (1756 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267234.1| PREDICTED: polynucleotide 5'-hydroxyl-kinase...   474   e-131
gb|ABK93937.1| unknown [Populus trichocarpa]                          471   e-130
ref|XP_002318622.1| predicted protein [Populus trichocarpa] gi|2...   470   e-130
ref|XP_003525672.1| PREDICTED: polynucleotide 5'-hydroxyl-kinase...   454   e-125
ref|XP_004157804.1| PREDICTED: polynucleotide 5'-hydroxyl-kinase...   448   e-123

>ref|XP_002267234.1| PREDICTED: polynucleotide 5'-hydroxyl-kinase NOL9 [Vitis vinifera]
            gi|297734062|emb|CBI15309.3| unnamed protein product
            [Vitis vinifera]
          Length = 378

 Score =  474 bits (1219), Expect = e-131
 Identities = 242/370 (65%), Positives = 291/370 (78%)
 Frame = +3

Query: 198  YIPEEWSMAAEKIAYDSITSPPPITVICGPKNSGKTTFSRHLVTTLIPRYDKVAYLDTDV 377
            YIPEEWS AAE IAYDS+TSPPP+ ++CG KN GKTTFSRHL+  L+ RY KVAYLDTDV
Sbjct: 15   YIPEEWSEAAETIAYDSVTSPPPVALVCGAKNCGKTTFSRHLLNILLQRYQKVAYLDTDV 74

Query: 378  GQPEFTSPGCLSLCVIDKQDPDDLTILTLKDPERWLFFGDVSSKRDPKTYLDSIFSLYDY 557
            GQ EFT PG LSL VID+  PD LTI  LK PER  +FGD+SSKRDP  YL+ IF+LYDY
Sbjct: 75   GQTEFTPPGFLSLTVIDQLTPD-LTIPCLKTPERCYYFGDISSKRDPTAYLNYIFALYDY 133

Query: 558  FRTKYHMSKENEDQYTGKRMLPLVVNTPGWVKGVGFDILVEMLRYISPTHVVQVRTSSET 737
            +R +Y M K ++     K  LPLVVNTPGWVKG+G+DILV++L+YI+PTHVV++  S+E 
Sbjct: 134  YRREYCMLKGSKKPV--KTELPLVVNTPGWVKGIGYDILVDVLKYIAPTHVVKINISAEG 191

Query: 738  KNLPTQAFWLDEELQVLDNHIKIYAARQDSRNQSVLVQKDARLLRDLRIISYFRLCFPSE 917
            KNLP  AFWLD + +   N I++ +ARQDS  +SVLVQKDA LLRDLRI++YFR CFPS 
Sbjct: 192  KNLPAGAFWLDGDHKESVNLIEVSSARQDSFKRSVLVQKDAGLLRDLRIMAYFRQCFPSN 251

Query: 918  VDFSSFKELAHALASHPPYEVSLSSVKVTHLHCQVPSNEVFRGLNATIVGLAISSAKPSE 1097
            ++ ++ KELAHALASH PYE+ + S+K+ HLHCQVPS E+   LNATIVGLA+SS    +
Sbjct: 252  LNITTIKELAHALASHSPYEIPIPSIKIKHLHCQVPSTEILYSLNATIVGLAVSS---ED 308

Query: 1098 SESCTPWCVGLGIVRGVDPSKDLLYVLTPVPPSILEKVDLLLQGFLQIPIDLLKVQGCRS 1277
            SE+ +P CVGLGIVRG+D  K LLYVLTPVP S LEKVDLLL GF+QIP  LL+VQGC S
Sbjct: 309  SENLSP-CVGLGIVRGIDTFKRLLYVLTPVPQSTLEKVDLLLLGFVQIPTCLLQVQGCVS 367

Query: 1278 PYISANVLST 1307
            PY+S NVL T
Sbjct: 368  PYMSTNVLPT 377


>gb|ABK93937.1| unknown [Populus trichocarpa]
          Length = 375

 Score =  471 bits (1212), Expect = e-130
 Identities = 240/374 (64%), Positives = 287/374 (76%), Gaps = 3/374 (0%)
 Frame = +3

Query: 198  YIPEEWSMAAEKIAYDSITSPPPITVICGPKNSGKTTFSRHLVTTLIPRYDKVAYLDTDV 377
            YI EEWS AA+ +AYDS TSPPPI ++CGPKN GKTTFSR+L+  L+ RY +V YLDTDV
Sbjct: 15   YISEEWSEAADSVAYDSTTSPPPIALVCGPKNCGKTTFSRYLLNILLQRYKRVGYLDTDV 74

Query: 378  GQPEFTSPGCLSLCVIDKQDPDDLTILTLKDPERWLFFGDVSSKRDPKTYLDSIFSLYDY 557
            GQPEFT+PG LSL V+DK  PD LTI  LK PER  FFGDVSSKRDP  YL  IF+LYDY
Sbjct: 75   GQPEFTTPGFLSLTVVDKLTPD-LTIPCLKTPERCFFFGDVSSKRDPTAYLKCIFTLYDY 133

Query: 558  FRTKYHMSK---ENEDQYTGKRMLPLVVNTPGWVKGVGFDILVEMLRYISPTHVVQVRTS 728
            +R +Y  S    ENE        +PLVVNT GWVKGVG+DILV+MLR+I+PTHVV++ T+
Sbjct: 134  YRKEYCKSDSPVENE--------MPLVVNTHGWVKGVGYDILVDMLRHIAPTHVVKINTT 185

Query: 729  SETKNLPTQAFWLDEELQVLDNHIKIYAARQDSRNQSVLVQKDARLLRDLRIISYFRLCF 908
            SE KNLP   FWLDE      N I I + R DS N+SVL+QKDARLLRDLRI++YFR CF
Sbjct: 186  SERKNLPGGKFWLDEGYGGQVNLIDINSTRHDSFNRSVLIQKDARLLRDLRIMAYFRQCF 245

Query: 909  PSEVDFSSFKELAHALASHPPYEVSLSSVKVTHLHCQVPSNEVFRGLNATIVGLAISSAK 1088
            PS ++ ++ K LA+ALASHPPY+V +SS+K+ HLH QVP  EVF  LNATIVGLA+SS +
Sbjct: 246  PSNLNITTIKGLANALASHPPYQVPISSIKIRHLHSQVPHTEVFYSLNATIVGLAVSSKQ 305

Query: 1089 PSESESCTPWCVGLGIVRGVDPSKDLLYVLTPVPPSILEKVDLLLQGFLQIPIDLLKVQG 1268
            P       PWCVGLGIVRG+D  K LLY+++PVPP +LEKVDLLLQGF+ IP  LL+VQG
Sbjct: 306  PEN----MPWCVGLGIVRGIDTFKGLLYLISPVPPILLEKVDLLLQGFIHIPTCLLQVQG 361

Query: 1269 CRSPYISANVLSTN 1310
            C SPY+S NVL+T+
Sbjct: 362  CMSPYMSGNVLATS 375


>ref|XP_002318622.1| predicted protein [Populus trichocarpa] gi|222859295|gb|EEE96842.1|
            predicted protein [Populus trichocarpa]
          Length = 377

 Score =  470 bits (1209), Expect = e-130
 Identities = 240/375 (64%), Positives = 287/375 (76%), Gaps = 4/375 (1%)
 Frame = +3

Query: 198  YIPEEWSMAAEKIAYDSITSPPPITVICGPKNSGKTTFSRHLVTTLIPRYDKVAYLDTDV 377
            YI EEWS AA+ +AYDS TSPPPI ++CGPKN GKTTFSR+L+  L+ RY +V YLDTDV
Sbjct: 15   YISEEWSEAADSVAYDSTTSPPPIALVCGPKNCGKTTFSRYLLNILLQRYKRVGYLDTDV 74

Query: 378  GQPEFTSPGCLSLCVIDKQDPDD-LTILTLKDPERWLFFGDVSSKRDPKTYLDSIFSLYD 554
            GQPEFT+PG LSL V+DK  P   LTI  LK PER  FFGDVSSKRDP  YL  IF+LYD
Sbjct: 75   GQPEFTTPGFLSLTVVDKLTPGIYLTIPCLKTPERCFFFGDVSSKRDPTAYLKCIFTLYD 134

Query: 555  YFRTKYHMSK---ENEDQYTGKRMLPLVVNTPGWVKGVGFDILVEMLRYISPTHVVQVRT 725
            Y+R +Y  S    ENE        +PLVVNT GWVKGVG+DILV+MLR+I+PTHVV++ T
Sbjct: 135  YYRKEYCKSDSPVENE--------MPLVVNTHGWVKGVGYDILVDMLRHIAPTHVVKINT 186

Query: 726  SSETKNLPTQAFWLDEELQVLDNHIKIYAARQDSRNQSVLVQKDARLLRDLRIISYFRLC 905
            +SE KNLP   FWLDE      N I I + R DS N+SVL+QKDARLLRDLRI++YFR C
Sbjct: 187  TSERKNLPGGKFWLDEGYGGQVNLIDINSTRHDSFNRSVLIQKDARLLRDLRIMAYFRQC 246

Query: 906  FPSEVDFSSFKELAHALASHPPYEVSLSSVKVTHLHCQVPSNEVFRGLNATIVGLAISSA 1085
            FPS ++ ++ KELA+ALASHPPY+V +SS+K+ HLH QVP  EVF  LNATIVGLA+SS 
Sbjct: 247  FPSNLNITTIKELANALASHPPYQVPISSIKIRHLHSQVPHTEVFYSLNATIVGLAVSSK 306

Query: 1086 KPSESESCTPWCVGLGIVRGVDPSKDLLYVLTPVPPSILEKVDLLLQGFLQIPIDLLKVQ 1265
            +P       PWCVGLGIVRG+D  K LLY+++PVPP +LEKVDLLLQGF+ IP  LL+VQ
Sbjct: 307  QPEN----MPWCVGLGIVRGIDTFKGLLYLISPVPPILLEKVDLLLQGFIHIPTCLLQVQ 362

Query: 1266 GCRSPYISANVLSTN 1310
            GC SPY+S NVL+T+
Sbjct: 363  GCMSPYMSGNVLATS 377


>ref|XP_003525672.1| PREDICTED: polynucleotide 5'-hydroxyl-kinase NOL9-like [Glycine max]
          Length = 372

 Score =  454 bits (1168), Expect = e-125
 Identities = 229/373 (61%), Positives = 287/373 (76%)
 Frame = +3

Query: 198  YIPEEWSMAAEKIAYDSITSPPPITVICGPKNSGKTTFSRHLVTTLIPRYDKVAYLDTDV 377
            YIPE+WS AAE IA+ S+   PPI +ICG KN GKTTFSR+L+  L+ +Y KVAYLDTDV
Sbjct: 10   YIPEQWSEAAESIAHSSM---PPIALICGAKNCGKTTFSRYLLNVLLHKYTKVAYLDTDV 66

Query: 378  GQPEFTSPGCLSLCVIDKQDPDDLTILTLKDPERWLFFGDVSSKRDPKTYLDSIFSLYDY 557
            GQPEFT P  LSL ++ K  PD LT+  LK PER LFFGDVSSKRDP TYL  +F++YDY
Sbjct: 67   GQPEFTPPAFLSLTIVHKVTPD-LTVPCLKTPERCLFFGDVSSKRDPSTYLSYVFAIYDY 125

Query: 558  FRTKYHMSKENEDQYTGKRMLPLVVNTPGWVKGVGFDILVEMLRYISPTHVVQVRTSSET 737
            ++ KY + ++ E+    K  LPL+VNTPGWVKGVG+D+LV+ML+YISPTHVV++  +SE 
Sbjct: 126  YQKKYCIYEKGENPCKVK--LPLIVNTPGWVKGVGYDVLVDMLKYISPTHVVKISIASEK 183

Query: 738  KNLPTQAFWLDEELQVLDNHIKIYAARQDSRNQSVLVQKDARLLRDLRIISYFRLCFPSE 917
            KNLP   FWLD E     N I+I +A QDS N+S+LVQKDARLLRDLRI++YF+ CF S+
Sbjct: 184  KNLPAGEFWLDGEHDETINLIEINSAHQDSLNRSLLVQKDARLLRDLRIMAYFKQCFSSD 243

Query: 918  VDFSSFKELAHALASHPPYEVSLSSVKVTHLHCQVPSNEVFRGLNATIVGLAISSAKPSE 1097
             + S+ KELAHALASH PYEV ++S+K+ HLHC+VPS+E+F  LNATIVGLA+ S  P  
Sbjct: 244  SNISTIKELAHALASHCPYEVPIASIKIRHLHCEVPSSEIFFSLNATIVGLAVDSEGPEN 303

Query: 1098 SESCTPWCVGLGIVRGVDPSKDLLYVLTPVPPSILEKVDLLLQGFLQIPIDLLKVQGCRS 1277
                 PWC+GLGIVRG+D  K +LYV+TPVP + LEKV++LLQG++QIP  LL+VQGC S
Sbjct: 304  ----LPWCLGLGIVRGIDTVKGVLYVITPVPHNSLEKVNVLLQGYIQIPSCLLQVQGCIS 359

Query: 1278 PYISANVLSTN*N 1316
            PY+SAN L+   N
Sbjct: 360  PYMSANTLTLTSN 372


>ref|XP_004157804.1| PREDICTED: polynucleotide 5'-hydroxyl-kinase NOL9-like [Cucumis
            sativus]
          Length = 379

 Score =  448 bits (1153), Expect = e-123
 Identities = 223/374 (59%), Positives = 282/374 (75%), Gaps = 1/374 (0%)
 Frame = +3

Query: 192  N*YIPEEWSMAAEKIAYDSITSPPPITVICGPKNSGKTTFSRHLVTTLIPRYDKVAYLDT 371
            N +IPEEWS AAE I +DS TSPPP+ +ICG KN GK+TFSRHL+   + RY KV YLD+
Sbjct: 13   NIFIPEEWSEAAESIVFDSPTSPPPVVLICGAKNCGKSTFSRHLLNVFLRRYKKVVYLDS 72

Query: 372  DVGQPEFTSPGCLSLCVIDKQDPDDLTILTLKDPERWLFFGDVSSKRDPKTYLDSIFSLY 551
            DVGQPEFT PG LSL V+D+  PD L+   LK PER  FFGD+SSKRDPK YL    +LY
Sbjct: 73   DVGQPEFTPPGFLSLTVVDRLIPD-LSTPCLKTPERMFFFGDISSKRDPKAYLSYANTLY 131

Query: 552  DYFRTKYHMSKENEDQYTGKRMLPLVVNTPGWVKGVGFDILVEMLRYISPTHVVQVRTSS 731
            DY+  +Y+   + E+    K  LPL+VNTPGWVKG+G++ILV+ML+YI+P+HVV++  S+
Sbjct: 132  DYYHKEYNSFNKTEE--LAKIELPLIVNTPGWVKGIGYEILVDMLKYIAPSHVVKINISA 189

Query: 732  ETKNLPTQAFWLDEELQV-LDNHIKIYAARQDSRNQSVLVQKDARLLRDLRIISYFRLCF 908
            E+KNLP   FWL+EE      + I+I +ARQD  N+S+LVQKD  L+RDLRI++YFR CF
Sbjct: 190  ESKNLPAGEFWLEEEENYGTTSLIEIRSARQDEFNRSILVQKDTSLMRDLRIMAYFRQCF 249

Query: 909  PSEVDFSSFKELAHALASHPPYEVSLSSVKVTHLHCQVPSNEVFRGLNATIVGLAISSAK 1088
            P + + ++ KELA+ALASHPPY+V +SS+K+ HLHCQVPS+++F  LNATIVGLA  S  
Sbjct: 250  PRDCNITTIKELANALASHPPYQVPISSIKIRHLHCQVPSDQIFYSLNATIVGLATCSNN 309

Query: 1089 PSESESCTPWCVGLGIVRGVDPSKDLLYVLTPVPPSILEKVDLLLQGFLQIPIDLLKVQG 1268
               S     WCVGLGIVRG+D  K LLYV+TPVP   LEKVDLLLQGF+QIP  LL+V+G
Sbjct: 310  SENSS----WCVGLGIVRGIDTFKGLLYVITPVPHGTLEKVDLLLQGFIQIPSCLLQVKG 365

Query: 1269 CRSPYISANVLSTN 1310
            C SPY+ AN+L T+
Sbjct: 366  CISPYMCANILPTS 379


Top