BLASTX nr result

ID: Coptis24_contig00011735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011735
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330932.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-32
ref|XP_002525944.1| conserved hypothetical protein [Ricinus comm...    81   4e-31
ref|XP_003525629.1| PREDICTED: DUF246 domain-containing protein ...    82   7e-31
ref|XP_003528247.1| PREDICTED: DUF246 domain-containing protein ...    82   1e-30
ref|XP_003522979.1| PREDICTED: DUF246 domain-containing protein ...    82   1e-30

>ref|XP_002330932.1| predicted protein [Populus trichocarpa] gi|222873126|gb|EEF10257.1|
           predicted protein [Populus trichocarpa]
          Length = 489

 Score = 81.6 bits (200), Expect(2) = 6e-32
 Identities = 38/46 (82%), Positives = 43/46 (93%)
 Frame = +1

Query: 127 LDKTSFRNDPSDFQDIFDVDHFITSLRDEVHILKELPPRVKTQEKI 264
           LDK+SF NDPS+FQDIFDVDHFITSLRDEV ILKELPPR+KT+ K+
Sbjct: 125 LDKSSFWNDPSEFQDIFDVDHFITSLRDEVRILKELPPRLKTRVKL 170



 Score = 80.9 bits (198), Expect(2) = 6e-32
 Identities = 35/42 (83%), Positives = 40/42 (95%)
 Frame = +3

Query: 3   VYPNNGYLMVSCNGGLNQMRATICDMVAIARHLNITLIIPEL 128
           +Y NNGYLMVSCNGGLNQMRA ICDMVAIAR+LN+TL++PEL
Sbjct: 84  IYKNNGYLMVSCNGGLNQMRAAICDMVAIARYLNVTLVVPEL 125


>ref|XP_002525944.1| conserved hypothetical protein [Ricinus communis]
           gi|223534773|gb|EEF36464.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 502

 Score = 81.3 bits (199), Expect(2) = 4e-31
 Identities = 36/42 (85%), Positives = 40/42 (95%)
 Frame = +3

Query: 3   VYPNNGYLMVSCNGGLNQMRATICDMVAIARHLNITLIIPEL 128
           VY NNGYLMVSCNGGLNQMRA ICDMVAIAR+LN+TL++PEL
Sbjct: 97  VYKNNGYLMVSCNGGLNQMRAAICDMVAIARYLNVTLVVPEL 138



 Score = 78.6 bits (192), Expect(2) = 4e-31
 Identities = 36/46 (78%), Positives = 42/46 (91%)
 Frame = +1

Query: 127 LDKTSFRNDPSDFQDIFDVDHFITSLRDEVHILKELPPRVKTQEKI 264
           LDK+SF NDPS+FQDIFDVDHFITSLRDEV ILKELPPR+K + ++
Sbjct: 138 LDKSSFWNDPSEFQDIFDVDHFITSLRDEVRILKELPPRIKRRVEL 183


>ref|XP_003525629.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine
           max]
          Length = 515

 Score = 81.6 bits (200), Expect(2) = 7e-31
 Identities = 37/42 (88%), Positives = 40/42 (95%)
 Frame = +3

Query: 3   VYPNNGYLMVSCNGGLNQMRATICDMVAIARHLNITLIIPEL 128
           VY NNGYLMVSCNGGLNQMRA ICDMVAIAR+LN+TLI+PEL
Sbjct: 107 VYKNNGYLMVSCNGGLNQMRAAICDMVAIARYLNVTLIVPEL 148



 Score = 77.4 bits (189), Expect(2) = 7e-31
 Identities = 37/41 (90%), Positives = 38/41 (92%)
 Frame = +1

Query: 127 LDKTSFRNDPSDFQDIFDVDHFITSLRDEVHILKELPPRVK 249
           LDKTSF  DPSDFQDIFDVDHFITSLRDEV ILKELPPR+K
Sbjct: 148 LDKTSFWADPSDFQDIFDVDHFITSLRDEVRILKELPPRLK 188


>ref|XP_003528247.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine
           max]
          Length = 631

 Score = 81.6 bits (200), Expect(2) = 1e-30
 Identities = 37/42 (88%), Positives = 40/42 (95%)
 Frame = +3

Query: 3   VYPNNGYLMVSCNGGLNQMRATICDMVAIARHLNITLIIPEL 128
           VY NNGYLMVSCNGGLNQMRA ICDMVAIAR+LN+TLI+PEL
Sbjct: 226 VYKNNGYLMVSCNGGLNQMRAAICDMVAIARYLNVTLIVPEL 267



 Score = 76.3 bits (186), Expect(2) = 1e-30
 Identities = 36/43 (83%), Positives = 39/43 (90%)
 Frame = +1

Query: 127 LDKTSFRNDPSDFQDIFDVDHFITSLRDEVHILKELPPRVKTQ 255
           LDK SF  DPS+FQDIFDVDHFITSLRDEV ILKELPPR+KT+
Sbjct: 267 LDKASFWADPSEFQDIFDVDHFITSLRDEVRILKELPPRLKTR 309


>ref|XP_003522979.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine
           max]
          Length = 498

 Score = 81.6 bits (200), Expect(2) = 1e-30
 Identities = 37/42 (88%), Positives = 40/42 (95%)
 Frame = +3

Query: 3   VYPNNGYLMVSCNGGLNQMRATICDMVAIARHLNITLIIPEL 128
           VY NNGYLMVSCNGGLNQMRA ICDMVAIAR+LN+TLI+PEL
Sbjct: 93  VYKNNGYLMVSCNGGLNQMRAAICDMVAIARYLNVTLIVPEL 134



 Score = 76.3 bits (186), Expect(2) = 1e-30
 Identities = 36/43 (83%), Positives = 39/43 (90%)
 Frame = +1

Query: 127 LDKTSFRNDPSDFQDIFDVDHFITSLRDEVHILKELPPRVKTQ 255
           LDK SF  DPS+FQDIFDVDHFITSLRDEV ILKELPPR+KT+
Sbjct: 134 LDKASFWADPSEFQDIFDVDHFITSLRDEVRILKELPPRLKTR 176


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