BLASTX nr result

ID: Coptis24_contig00011669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011669
         (783 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275316.2| PREDICTED: uncharacterized protein LOC100253...   207   2e-51
emb|CBI30031.3| unnamed protein product [Vitis vinifera]              207   2e-51
ref|XP_002512158.1| conserved hypothetical protein [Ricinus comm...   205   8e-51
ref|XP_002314226.1| predicted protein [Populus trichocarpa] gi|2...   204   2e-50
emb|CBI32175.3| unnamed protein product [Vitis vinifera]              202   5e-50

>ref|XP_002275316.2| PREDICTED: uncharacterized protein LOC100253804 [Vitis vinifera]
          Length = 431

 Score =  207 bits (528), Expect = 2e-51
 Identities = 114/226 (50%), Positives = 147/226 (65%), Gaps = 7/226 (3%)
 Frame = +3

Query: 117 MEYEV-DTSGTDDDLPPSHQNXXXXXXXXXXXXXXXXXXXXPYPRMHTDMESQIYHLEQE 293
           M+YE+ D+SGTDDDLPPSHQN                    PYPR+H+DME+QI+HLEQE
Sbjct: 1   MDYELSDSSGTDDDLPPSHQNRGSRGGRVAGNGRSVVGSA-PYPRLHSDMETQIHHLEQE 59

Query: 294 AYRAVLLAFKAQSDTTITWEKTSLMAELRKELRISEDEHKALLGQVDGDDNLRRIREWRK 473
           AY +VL AFKAQSD  ITW+K  L+ ELRKELR+S+DEH+ LL +V+ D+ ++RIREWR+
Sbjct: 60  AYSSVLRAFKAQSDA-ITWDKEGLITELRKELRVSDDEHRELLARVNADNIIQRIREWRQ 118

Query: 474 SGGHQSGSHNTAQPGHDPVLSPTFSASRKKQKLSQSVPSLSLNAPSSVLHTQTVAPS--- 644
           +GGHQ+   + +Q  HD + SPT SASRKKQKLSQSVPSLS    S  LH Q+VAP+   
Sbjct: 119 AGGHQTAMLSMSQHAHDQIPSPTVSASRKKQKLSQSVPSLSFGVSSQALHPQSVAPASVQ 178

Query: 645 ---MSVXXXXXXXXXXXXSSQSHILAGITSAKSMPYPSTISSERGQ 773
               ++                    G++S KSM Y S+I++ RGQ
Sbjct: 179 PSPSTMKRGPTLGGRGKKFKPGQPFPGLSSVKSMQYHSSITAGRGQ 224


>emb|CBI30031.3| unnamed protein product [Vitis vinifera]
          Length = 483

 Score =  207 bits (528), Expect = 2e-51
 Identities = 114/226 (50%), Positives = 147/226 (65%), Gaps = 7/226 (3%)
 Frame = +3

Query: 117 MEYEV-DTSGTDDDLPPSHQNXXXXXXXXXXXXXXXXXXXXPYPRMHTDMESQIYHLEQE 293
           M+YE+ D+SGTDDDLPPSHQN                    PYPR+H+DME+QI+HLEQE
Sbjct: 1   MDYELSDSSGTDDDLPPSHQNRGSRGGRVAGNGRSVVGSA-PYPRLHSDMETQIHHLEQE 59

Query: 294 AYRAVLLAFKAQSDTTITWEKTSLMAELRKELRISEDEHKALLGQVDGDDNLRRIREWRK 473
           AY +VL AFKAQSD  ITW+K  L+ ELRKELR+S+DEH+ LL +V+ D+ ++RIREWR+
Sbjct: 60  AYSSVLRAFKAQSDA-ITWDKEGLITELRKELRVSDDEHRELLARVNADNIIQRIREWRQ 118

Query: 474 SGGHQSGSHNTAQPGHDPVLSPTFSASRKKQKLSQSVPSLSLNAPSSVLHTQTVAPS--- 644
           +GGHQ+   + +Q  HD + SPT SASRKKQKLSQSVPSLS    S  LH Q+VAP+   
Sbjct: 119 AGGHQTAMLSMSQHAHDQIPSPTVSASRKKQKLSQSVPSLSFGVSSQALHPQSVAPASVQ 178

Query: 645 ---MSVXXXXXXXXXXXXSSQSHILAGITSAKSMPYPSTISSERGQ 773
               ++                    G++S KSM Y S+I++ RGQ
Sbjct: 179 PSPSTMKRGPTLGGRGKKFKPGQPFPGLSSVKSMQYHSSITAGRGQ 224


>ref|XP_002512158.1| conserved hypothetical protein [Ricinus communis]
           gi|223548702|gb|EEF50192.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 430

 Score =  205 bits (522), Expect = 8e-51
 Identities = 120/227 (52%), Positives = 145/227 (63%), Gaps = 5/227 (2%)
 Frame = +3

Query: 117 MEYE-VDTSGTDDDLPPSHQNXXXXXXXXXXXXXXXXXXXXPYPRMH--TDMESQIYHLE 287
           M+YE  D+SGTDDDLPPSHQ+                    PYPRM+  TDME+QI+ LE
Sbjct: 1   MDYEPYDSSGTDDDLPPSHQSRIPRGGRVAGNGRPVAASM-PYPRMYGETDMETQIHQLE 59

Query: 288 QEAYRAVLLAFKAQSDTTITWEKTSLMAELRKELRISEDEHKALLGQVDGDDNLRRIREW 467
           QEAY +VL AFKAQ+D  ITWEK SL+ ELRKELR+S +EH+ LLG+V+ DD +RRIREW
Sbjct: 60  QEAYSSVLRAFKAQADA-ITWEKESLITELRKELRLSNEEHRELLGRVNADDVIRRIREW 118

Query: 468 RKSGGHQSGSHNTAQPGHDPVLSPTFSASRKKQKLSQSVPSLSLNAPSSVLHTQTVAPS- 644
           R++GG QSG   T Q  HDP+ SPT SASRKKQK++ SVPS S   PS   H Q V+ S 
Sbjct: 119 RQTGGLQSGMLGTGQAVHDPIPSPTVSASRKKQKITPSVPSQSFGGPSPSFHPQAVSASH 178

Query: 645 -MSVXXXXXXXXXXXXSSQSHILAGITSAKSMPYPSTISSERGQVAH 782
             S               Q   L G +S KS+PYPS+  S RGQVA+
Sbjct: 179 QPSSSAKRGPVSGSKSKKQKPALPGASSMKSIPYPSSGPSGRGQVAN 225


>ref|XP_002314226.1| predicted protein [Populus trichocarpa] gi|222850634|gb|EEE88181.1|
           predicted protein [Populus trichocarpa]
          Length = 422

 Score =  204 bits (519), Expect = 2e-50
 Identities = 119/227 (52%), Positives = 143/227 (62%), Gaps = 6/227 (2%)
 Frame = +3

Query: 117 MEYE-VDTSGTDDDLPPSHQNXXXXXXXXXXXXXXXXXXXXPYPRMH--TDMESQIYHLE 287
           M+YE  D+SGTDDDLPPSHQN                    PYPRM+  TDME+QI+ LE
Sbjct: 1   MDYEPYDSSGTDDDLPPSHQNRIPRGGRVAGNGRPVGGSV-PYPRMYGETDMETQIHQLE 59

Query: 288 QEAYRAVLLAFKAQSDTTITWEKTSLMAELRKELRISEDEHKALLGQVDGDDNLRRIREW 467
           QEAY +VL AFKAQ+D  ITWEK SL+ ELRKELR+S +EH+ LL +V+ DD +RRIREW
Sbjct: 60  QEAYSSVLRAFKAQADA-ITWEKESLITELRKELRLSNEEHRELLARVNADDVIRRIREW 118

Query: 468 RKSGGHQSGSHNTAQPGHDPVLSPTFSASRKKQKLSQSVPSLSLNAPSSVLHTQTVAPS- 644
           R++GGHQSG   T Q  HDP+ SPT SASRKKQK++ S+PS S   PS   H   V+ S 
Sbjct: 119 RQAGGHQSGMLTTGQAVHDPIPSPTVSASRKKQKMTSSIPSQSFVGPSPSFHPPAVSASH 178

Query: 645 --MSVXXXXXXXXXXXXSSQSHILAGITSAKSMPYPSTISSERGQVA 779
              S               Q   L G +S KS+PYPS+  S RGQVA
Sbjct: 179 QPSSSAAKRGPGTGPKGKKQKPGLPGASSMKSIPYPSSGPSGRGQVA 225


>emb|CBI32175.3| unnamed protein product [Vitis vinifera]
          Length = 433

 Score =  202 bits (515), Expect = 5e-50
 Identities = 117/229 (51%), Positives = 144/229 (62%), Gaps = 7/229 (3%)
 Frame = +3

Query: 117 MEYE-VDTSGTDDDLPPSHQNXXXXXXXXXXXXXXXXXXXXPYPRMH--TDMESQIYHLE 287
           M+YE  D+SGTDDDLPP HQN                    PY RM+  TDME+QI+ LE
Sbjct: 1   MDYEPFDSSGTDDDLPPPHQNRIPRGGRVAGNGRSAVVGSIPYSRMYGETDMETQIHQLE 60

Query: 288 QEAYRAVLLAFKAQSDTTITWEKTSLMAELRKELRISEDEHKALLGQVDGDDNLRRIREW 467
           QEAY +VL AFKAQ+D  ITWEK SL+ ELRKELR+S +EH+ LLG+V+ DD +RRIREW
Sbjct: 61  QEAYSSVLRAFKAQADA-ITWEKESLITELRKELRLSNEEHRELLGRVNADDVIRRIREW 119

Query: 468 RKSGGHQSGSHNTAQPGHDPVLSPTFSASRKKQKLSQSVPSLSLNAPSSVLHTQTVA--- 638
           R++GG Q G   T Q  HDP+ SPT SASRKKQK++QS+PS S   PS   H Q +A   
Sbjct: 120 RQAGGLQPGMLTTGQAVHDPIPSPTVSASRKKQKITQSIPSQSFGGPSQSFHPQAIAASN 179

Query: 639 -PSMSVXXXXXXXXXXXXSSQSHILAGITSAKSMPYPSTISSERGQVAH 782
            PS S               +S +L G +S KSM Y S+  + RGQVA+
Sbjct: 180 QPSSSAAKRGPILGPKGKKHKS-VLPGASSMKSMQYASSGPTGRGQVAN 227


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