BLASTX nr result

ID: Coptis24_contig00011599 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011599
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284666.1| PREDICTED: uncharacterized protein LOC100259...   104   6e-21
ref|XP_002527791.1| conserved hypothetical protein [Ricinus comm...    95   5e-18
ref|XP_002314797.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-15
ref|XP_002887327.1| hypothetical protein ARALYDRAFT_894894 [Arab...    83   3e-14
gb|AAD55491.1|AC008148_1 Unknown protein [Arabidopsis thaliana]        82   4e-14

>ref|XP_002284666.1| PREDICTED: uncharacterized protein LOC100259429 [Vitis vinifera]
           gi|297737670|emb|CBI26871.3| unnamed protein product
           [Vitis vinifera]
          Length = 188

 Score =  104 bits (260), Expect = 6e-21
 Identities = 57/123 (46%), Positives = 74/123 (60%)
 Frame = +2

Query: 44  QSARALPTTFQINCSKHHSIFLASKNTHQHNVQSGEAQSPLVFKKSPLVRINLKTKNFLW 223
           Q  +ALP  F   C K  S+ ++S     H+ +  +  + ++ K    +  N        
Sbjct: 8   QIPKALPCLFHSQC-KFPSLSISSIQKQSHHAKPIKTITSIIKKSVDYISTN-------- 58

Query: 224 PQKASSLAIEVGAILAAVEQPAFAVTGVNNQEDFTWTLIQLGIVAFWYFLIMPPIILNWL 403
                SLAI+VGA+LA VE+PAFAVTGVN + D  W LIQLGIV FWYFLIMPPII+NWL
Sbjct: 59  ---KHSLAIQVGALLATVEKPAFAVTGVNKEVDLIWVLIQLGIVLFWYFLIMPPIIMNWL 115

Query: 404 RLR 412
           R+R
Sbjct: 116 RIR 118


>ref|XP_002527791.1| conserved hypothetical protein [Ricinus communis]
           gi|223532826|gb|EEF34601.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 187

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 43/61 (70%), Positives = 50/61 (81%)
 Frame = +2

Query: 230 KASSLAIEVGAILAAVEQPAFAVTGVNNQEDFTWTLIQLGIVAFWYFLIMPPIILNWLRL 409
           K  SLA+++GA  A VEQ A AVTGVNN+ED TW LIQ  IVAFWYFLIMPPII+NW+R+
Sbjct: 57  KKFSLAVQLGAFFATVEQSALAVTGVNNEEDLTWVLIQSAIVAFWYFLIMPPIIMNWMRV 116

Query: 410 R 412
           R
Sbjct: 117 R 117


>ref|XP_002314797.1| predicted protein [Populus trichocarpa] gi|222863837|gb|EEF00968.1|
           predicted protein [Populus trichocarpa]
          Length = 187

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 54/121 (44%), Positives = 72/121 (59%)
 Frame = +2

Query: 41  YQSARALPTTFQINCSKHHSIFLASKNTHQHNVQSGEAQSPLVFKKSPLVRINLKTKNFL 220
           +QS +ALPT       +  S+   +K    HN +        + KK+    +N K ++  
Sbjct: 7   FQSPKALPTLSSQR--RRTSLCTTAKYKPFHNTK--------LVKKA--TSVNRKPEDHD 54

Query: 221 WPQKASSLAIEVGAILAAVEQPAFAVTGVNNQEDFTWTLIQLGIVAFWYFLIMPPIILNW 400
             +K SSLAI+  A+LA +EQPAFA+TGVNN ED T  LIQL IV F YF++MPPII NW
Sbjct: 55  QAKK-SSLAIQFAALLATIEQPAFAITGVNNPEDLTSILIQLAIVTFCYFILMPPIIFNW 113

Query: 401 L 403
           L
Sbjct: 114 L 114


>ref|XP_002887327.1| hypothetical protein ARALYDRAFT_894894 [Arabidopsis lyrata subsp.
           lyrata] gi|297333168|gb|EFH63586.1| hypothetical protein
           ARALYDRAFT_894894 [Arabidopsis lyrata subsp. lyrata]
          Length = 191

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 33/65 (50%), Positives = 52/65 (80%)
 Frame = +2

Query: 218 LWPQKASSLAIEVGAILAAVEQPAFAVTGVNNQEDFTWTLIQLGIVAFWYFLIMPPIILN 397
           L+  K + LA ++GA+LA ++ PA A+TGVNNQ++ +  ++ +GI++ WYFL+MPPII+N
Sbjct: 55  LFGAKKTVLAAQLGAVLATIDHPALAITGVNNQQELSSVVLDIGIISVWYFLVMPPIIMN 114

Query: 398 WLRLR 412
           WLR+R
Sbjct: 115 WLRVR 119


>gb|AAD55491.1|AC008148_1 Unknown protein [Arabidopsis thaliana]
          Length = 141

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 32/61 (52%), Positives = 50/61 (81%)
 Frame = +2

Query: 230 KASSLAIEVGAILAAVEQPAFAVTGVNNQEDFTWTLIQLGIVAFWYFLIMPPIILNWLRL 409
           K + LA ++GA+LA ++ PA A+TGVNNQ++ +  ++ +GI++ WYFL+MPPII+NWLR+
Sbjct: 59  KKTILAAQLGAVLATIDHPALAITGVNNQQELSSVVLDIGIISVWYFLVMPPIIMNWLRV 118

Query: 410 R 412
           R
Sbjct: 119 R 119


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