BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011597
         (2122 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264285.1| PREDICTED: U3 small nucleolar RNA-associated...   669   0.0  
ref|XP_002281926.1| PREDICTED: U3 small nucleolar RNA-associated...   668   0.0  
emb|CBI17936.3| unnamed protein product [Vitis vinifera]              660   0.0  
ref|XP_002520985.1| nucleotide binding protein, putative [Ricinu...   636   e-180
ref|XP_004149687.1| PREDICTED: U3 small nucleolar RNA-associated...   631   e-178

>ref|XP_002264285.1| PREDICTED: U3 small nucleolar RNA-associated protein 18 homolog
            [Vitis vinifera]
          Length = 569

 Score =  669 bits (1727), Expect = 0.0
 Identities = 352/574 (61%), Positives = 419/574 (72%), Gaps = 14/574 (2%)
 Frame = -3

Query: 1973 SLISQKTLRKKPVYELKQEENDEPLSLQESE----KNEVAKESSLVDLKSKKRKNIHNXX 1806
            SLISQ  L K  + + K+E+ D P  L+ +E    + E+  ++S +  + K+RK      
Sbjct: 2    SLISQNILPKNRINKTKREDIDIPSPLEGNEDIEDRKELGPDTSRIKRRKKERKEEEKQL 61

Query: 1805 XXXXXXXXXXXXXXXXLLFGSLYSPNEFGK--EEEAGNEVKGPYSDPRLFFTDRTANGVV 1632
                             LFGSLY+P EFGK  EEE  + V+    D  LFFTDR+AN  V
Sbjct: 62   EVEQEREMKKLENL---LFGSLYAPVEFGKGGEEEVRDMVE---KDSALFFTDRSANSSV 115

Query: 1631 TVXXXXXXXXXXDNNLVECIDKKPAWEDPEEKTIRIDIEKVNRMRKLKTKEDETSICGS- 1455
            +V           N+  +   +KP W D EE+   I+I KVNR+RKL+ +EDE+ I GS 
Sbjct: 116  SVYEEDAELPEESNDEEDTKQRKPVWVDEEEERTNINIAKVNRLRKLRKEEDESVISGSA 175

Query: 1454 --DRLRAYHVKTNPPPKWAQ-----RGSGPIHDDESDEEYGALVDQAVEVNQDNKSILQT 1296
               RLRA H K NP  +WAQ     R      D+ SDEE GA+V    +  +    IL+T
Sbjct: 176  YVSRLRAQHAKLNPGTEWAQLDSQLRDCSSYDDESSDEENGAVVAPGYKDVEAVDDILRT 235

Query: 1295 NEDLVVKSRVKLLPGILEYSRLVDANAEDPSNSAINSVQFHRNXXXXXXXXXXXXXRFFQ 1116
            +EDL+VKS  KLLPG+LEYSRL+DANAEDPSN  INSVQFHRN             RFFQ
Sbjct: 236  DEDLIVKSSTKLLPGLLEYSRLIDANAEDPSNGPINSVQFHRNAQLLLTAGLDRRLRFFQ 295

Query: 1115 VDGKRNTMIQSIFLEDCPIRKATFLPDGSQVIVGGRRKFFYSFDLAHAKFDRIGPLVGRE 936
            +DGKRNT IQSIFL+DCPIRKA+FLPDGS+VI+ GRRKFFYSFDL  A+ D+IGPL GRE
Sbjct: 296  IDGKRNTKIQSIFLDDCPIRKASFLPDGSEVIIAGRRKFFYSFDLVKARVDKIGPLTGRE 355

Query: 935  EKSLEVFDVSPDSRTIAFLGNEGYILLVSCKTKELIGTLKMNGSARSLAFTDDGRQLLSS 756
            EKSLEVF+VSPDS TIAF+GNEG ILLVS +TKELIGT+KMNG+ RSLAFTDDG+QLLSS
Sbjct: 356  EKSLEVFEVSPDSGTIAFVGNEGCILLVSSRTKELIGTVKMNGTVRSLAFTDDGKQLLSS 415

Query: 755  GGDGHIYHWDLRTRMCFHKAVDEGCIMGSALSTSPNGALFAAGSSSGIVNIYNQEEFLGG 576
            GGDGHIYHWDLRTR CFHKA+DEGCI G++L  SPNGALFAAGSSSGIVN+YN+EEFLGG
Sbjct: 416  GGDGHIYHWDLRTRTCFHKAIDEGCINGTSLCASPNGALFAAGSSSGIVNVYNKEEFLGG 475

Query: 575  KRKPMKTIENLTTRVDYLKFNHDAQILAICSTMQKNSLKLVHMPSFTVFSNWPPPKQTLR 396
            KRKP+KTIENLTT+VD+LKFN+DAQILAI S+M+KNSLKL+H+PS+TV+SNWPPP +TL 
Sbjct: 476  KRKPIKTIENLTTKVDFLKFNNDAQILAISSSMKKNSLKLIHIPSYTVYSNWPPPNRTLH 535

Query: 395  HPRCLDFSPGGGFMATGNADGKVFLYKLHHYQHA 294
            +PRCLDFSPGGGFMA GNA GKV LYKLHHYQHA
Sbjct: 536  YPRCLDFSPGGGFMAVGNAAGKVLLYKLHHYQHA 569


>ref|XP_002281926.1| PREDICTED: U3 small nucleolar RNA-associated protein 18 homolog
            [Vitis vinifera]
          Length = 568

 Score =  668 bits (1724), Expect = 0.0
 Identities = 355/569 (62%), Positives = 411/569 (72%), Gaps = 9/569 (1%)
 Frame = -3

Query: 1973 SLISQKTLRKKPVYELKQEENDEPLSLQESEKNEVAKESSLVDLKSKKRKNIHNXXXXXX 1794
            SLISQ  LRK  V + K+E+ D P  L+ +E NE  KE     L++KKRK  H       
Sbjct: 2    SLISQNILRKNRVNKTKREDVDVPSPLEGNE-NEDRKELVPDILRTKKRKKEHKEEDKQL 60

Query: 1793 XXXXXXXXXXXXL-LFGSLYSPNEFGKEEEAGNEVKGPYSDPRLFFTDRTANGVVTVXXX 1617
                          LFGSLY P EFGK  E   + K    D  LFFTDR+AN  ++    
Sbjct: 61   EVEEEREMKKLENFLFGSLYDPVEFGKVGEEEVQTKAE-KDSTLFFTDRSANSALSFYEE 119

Query: 1616 XXXXXXXDNNLVECIDKKPAWEDPEEKTIRIDIEKVNRMRKLKTKEDETSICGS---DRL 1446
                    +   +   +KP W D EE+   I+I KVNR+RKL+ +EDE+ I GS    RL
Sbjct: 120  DAEFPEESSGEEDTKQRKPVWVDEEEEKTNINISKVNRLRKLRKEEDESLISGSVYVSRL 179

Query: 1445 RAYHVKTNPPPKWAQRGS-----GPIHDDESDEEYGALVDQAVEVNQDNKSILQTNEDLV 1281
            RA H K NP  +WAQ  S        + + SDEE GA++    +  +    IL+TNEDLV
Sbjct: 180  RAQHAKLNPGTEWAQLDSWSRTYSSDYGESSDEENGAVIAPGHKDVEAVDDILRTNEDLV 239

Query: 1280 VKSRVKLLPGILEYSRLVDANAEDPSNSAINSVQFHRNXXXXXXXXXXXXXRFFQVDGKR 1101
            VKS  KLLPG+LEYSRLVDANAEDPSN  INSVQFH N             RFFQ+DG+R
Sbjct: 240  VKSGTKLLPGLLEYSRLVDANAEDPSNGPINSVQFHCNAQLLLTAGLDRRVRFFQIDGRR 299

Query: 1100 NTMIQSIFLEDCPIRKATFLPDGSQVIVGGRRKFFYSFDLAHAKFDRIGPLVGREEKSLE 921
            NT IQSIFLEDCPIRKA+FLPDGSQVI+ GRRKFFYSFDL  AK D+IGPL+GREEKSLE
Sbjct: 300  NTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSFDLVKAKVDKIGPLIGREEKSLE 359

Query: 920  VFDVSPDSRTIAFLGNEGYILLVSCKTKELIGTLKMNGSARSLAFTDDGRQLLSSGGDGH 741
             F+VSPDS TIAF+GNEGYILLVS KTKELIGTLKMNG+ RSLAF DDGRQLLSSGGDGH
Sbjct: 360  AFEVSPDSGTIAFVGNEGYILLVSSKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDGH 419

Query: 740  IYHWDLRTRMCFHKAVDEGCIMGSALSTSPNGALFAAGSSSGIVNIYNQEEFLGGKRKPM 561
            IYHWDLRTR CFHK  DEGCI G+AL  SP+GALFAAGS+SGIVN+YN+EEFLGGKRKPM
Sbjct: 420  IYHWDLRTRTCFHKGTDEGCINGTALCASPSGALFAAGSASGIVNVYNKEEFLGGKRKPM 479

Query: 560  KTIENLTTRVDYLKFNHDAQILAICSTMQKNSLKLVHMPSFTVFSNWPPPKQTLRHPRCL 381
            KTIEN+TT+VD++KFN+DAQILAI S+M+KNSLKL+H+PS+TVFSNWPPP +TL +PRCL
Sbjct: 480  KTIENVTTKVDFMKFNNDAQILAISSSMKKNSLKLIHIPSYTVFSNWPPPNRTLHYPRCL 539

Query: 380  DFSPGGGFMATGNADGKVFLYKLHHYQHA 294
            DFSPGGGFMA G+A GKV LYKLHHYQHA
Sbjct: 540  DFSPGGGFMAVGSAAGKVLLYKLHHYQHA 568


>emb|CBI17936.3| unnamed protein product [Vitis vinifera]
          Length = 591

 Score =  660 bits (1703), Expect = 0.0
 Identities = 353/564 (62%), Positives = 406/564 (71%), Gaps = 4/564 (0%)
 Frame = -3

Query: 1973 SLISQKTLRKKPVYELKQEENDEPLSLQESEKNEVAKESSLVDLKSKKRKNIHNXXXXXX 1794
            SLISQ  LRK  V + K+E+ D P  L+ +E NE  KE     L++KKRK  H       
Sbjct: 39   SLISQNILRKNRVNKTKREDVDVPSPLEGNE-NEDRKELVPDILRTKKRKKEHKEEDKQL 97

Query: 1793 XXXXXXXXXXXXL-LFGSLYSPNEFGKEEEAGNEVKGPYSDPRLFFTDRTANGVVTVXXX 1617
                          LFGSLY P EFGK  E   + K    D  LFFTDR+AN  ++    
Sbjct: 98   EVEEEREMKKLENFLFGSLYDPVEFGKVGEEEVQTKAE-KDSTLFFTDRSANSALSFYEE 156

Query: 1616 XXXXXXXDNNLVECIDKKPAWEDPEEKTIRIDIEKVNRMRKLKTKEDETSICGS---DRL 1446
                    +   +   +KP W D EE+   I+I KVNR+RKL+ +EDE+ I GS    RL
Sbjct: 157  DAEFPEESSGEEDTKQRKPVWVDEEEEKTNINISKVNRLRKLRKEEDESLISGSVYVSRL 216

Query: 1445 RAYHVKTNPPPKWAQRGSGPIHDDESDEEYGALVDQAVEVNQDNKSILQTNEDLVVKSRV 1266
            RA H K NP  +WAQ  S          +YG    +AV+       IL+TNEDLVVKS  
Sbjct: 217  RAQHAKLNPGTEWAQLDSW---SRTYSSDYGHKDVEAVD------DILRTNEDLVVKSGT 267

Query: 1265 KLLPGILEYSRLVDANAEDPSNSAINSVQFHRNXXXXXXXXXXXXXRFFQVDGKRNTMIQ 1086
            KLLPG+LEYSRLVDANAEDPSN  INSVQFH N             RFFQ+DG+RNT IQ
Sbjct: 268  KLLPGLLEYSRLVDANAEDPSNGPINSVQFHCNAQLLLTAGLDRRVRFFQIDGRRNTKIQ 327

Query: 1085 SIFLEDCPIRKATFLPDGSQVIVGGRRKFFYSFDLAHAKFDRIGPLVGREEKSLEVFDVS 906
            SIFLEDCPIRKA+FLPDGSQVI+ GRRKFFYSFDL  AK D+IGPL+GREEKSLE F+VS
Sbjct: 328  SIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSFDLVKAKVDKIGPLIGREEKSLEAFEVS 387

Query: 905  PDSRTIAFLGNEGYILLVSCKTKELIGTLKMNGSARSLAFTDDGRQLLSSGGDGHIYHWD 726
            PDS TIAF+GNEGYILLVS KTKELIGTLKMNG+ RSLAF DDGRQLLSSGGDGHIYHWD
Sbjct: 388  PDSGTIAFVGNEGYILLVSSKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDGHIYHWD 447

Query: 725  LRTRMCFHKAVDEGCIMGSALSTSPNGALFAAGSSSGIVNIYNQEEFLGGKRKPMKTIEN 546
            LRTR CFHK  DEGCI G+AL  SP+GALFAAGS+SGIVN+YN+EEFLGGKRKPMKTIEN
Sbjct: 448  LRTRTCFHKGTDEGCINGTALCASPSGALFAAGSASGIVNVYNKEEFLGGKRKPMKTIEN 507

Query: 545  LTTRVDYLKFNHDAQILAICSTMQKNSLKLVHMPSFTVFSNWPPPKQTLRHPRCLDFSPG 366
            +TT+VD++KFN+DAQILAI S+M+KNSLKL+H+PS+TVFSNWPPP +TL +PRCLDFSPG
Sbjct: 508  VTTKVDFMKFNNDAQILAISSSMKKNSLKLIHIPSYTVFSNWPPPNRTLHYPRCLDFSPG 567

Query: 365  GGFMATGNADGKVFLYKLHHYQHA 294
            GGFMA G+A GKV LYKLHHYQHA
Sbjct: 568  GGFMAVGSAAGKVLLYKLHHYQHA 591


>ref|XP_002520985.1| nucleotide binding protein, putative [Ricinus communis]
            gi|223539822|gb|EEF41402.1| nucleotide binding protein,
            putative [Ricinus communis]
          Length = 566

 Score =  636 bits (1641), Expect = e-180
 Identities = 340/571 (59%), Positives = 406/571 (71%), Gaps = 11/571 (1%)
 Frame = -3

Query: 1973 SLISQKTLRKKPVYELKQEENDEPLSLQESEKN-EVAKESSLVDLKSKKRKNIHNXXXXX 1797
            SLISQ    K  V + K+EE D P  ++ +E+N E  ++S L   ++KKR+         
Sbjct: 2    SLISQNVGSKNRV-KTKKEETDGPAFMEGNEENNEDGRDSELAMSRAKKRRR--EKEEQL 58

Query: 1796 XXXXXXXXXXXXXLLFGSLYSPNEFGKEEE--AGNEVKGPYSDPRLFFTDRTANGVVTVX 1623
                          LFGSLYSP EFG +EE  A +EV+   +   LFF DR+A+  + V 
Sbjct: 59   EVDEGKEMKRLENFLFGSLYSPIEFGNDEEEKAHDEVE---NGSALFFVDRSASTELCVY 115

Query: 1622 XXXXXXXXXDNNLVECIDKKPAWEDPEEKTIRIDIEKVNRMRKLKTKEDETSICGSD--- 1452
                      +   E   +KP W D EE    IDI   NR+RKL+ ++ E  I G +   
Sbjct: 116  KEESEVLEKSDVDEEPRQRKPVWVDEEEAKTTIDIAHTNRLRKLRKEDSENLISGREYVA 175

Query: 1451 RLRAYHVKTNPPPKWAQ-----RGSGPIHDDESDEEYGALVDQAVEVNQDNKSILQTNED 1287
            RLRA+H K NP  +WA+     R +G   D+ SDEE G +  +  EV +    + +TNED
Sbjct: 176  RLRAHHAKLNPGTEWARLDLQSRNNGSYDDESSDEENGIVTARGYEVAETFDDVFRTNED 235

Query: 1286 LVVKSRVKLLPGILEYSRLVDANAEDPSNSAINSVQFHRNXXXXXXXXXXXXXRFFQVDG 1107
            LVVKSR KLLPGILEYSRLVDANA++ SN  INSVQFHRN             RFFQ+DG
Sbjct: 236  LVVKSRKKLLPGILEYSRLVDANAQEASNGPINSVQFHRNAQLLLAAGLDRRLRFFQIDG 295

Query: 1106 KRNTMIQSIFLEDCPIRKATFLPDGSQVIVGGRRKFFYSFDLAHAKFDRIGPLVGREEKS 927
            KRNT IQSIF++DCPIRKA+FLPDGSQVI+ GRRKFFYSFDL +AK D+IGPLVGREEKS
Sbjct: 296  KRNTKIQSIFIDDCPIRKASFLPDGSQVIIAGRRKFFYSFDLVNAKVDKIGPLVGREEKS 355

Query: 926  LEVFDVSPDSRTIAFLGNEGYILLVSCKTKELIGTLKMNGSARSLAFTDDGRQLLSSGGD 747
            LE F+VSPDS TIAF+GNEGYILLVS KTKELIGTLKMNG+AR+LAF+ +G+QLLS GGD
Sbjct: 356  LEFFEVSPDSSTIAFVGNEGYILLVSSKTKELIGTLKMNGTARALAFSGNGQQLLSHGGD 415

Query: 746  GHIYHWDLRTRMCFHKAVDEGCIMGSALSTSPNGALFAAGSSSGIVNIYNQEEFLGGKRK 567
            G +YHWDLRTR C HKAVDEGCI G+ALS SPNG+LFAAGS  GIVN+YN E FLGG RK
Sbjct: 416  GQVYHWDLRTRTCIHKAVDEGCINGTALSASPNGSLFAAGSDVGIVNVYNNELFLGGNRK 475

Query: 566  PMKTIENLTTRVDYLKFNHDAQILAICSTMQKNSLKLVHMPSFTVFSNWPPPKQTLRHPR 387
            P+KTI+NLTT+VD++KF++DAQILAICS M+KNSLKL+H+PS+TVFSNWPP   TL  PR
Sbjct: 476  PIKTIDNLTTKVDFMKFSNDAQILAICSHMKKNSLKLIHLPSYTVFSNWPPGNTTLHFPR 535

Query: 386  CLDFSPGGGFMATGNADGKVFLYKLHHYQHA 294
            CLDFSPGGGFMA GNA GKV LYKLHHYQHA
Sbjct: 536  CLDFSPGGGFMAVGNAAGKVLLYKLHHYQHA 566


>ref|XP_004149687.1| PREDICTED: U3 small nucleolar RNA-associated protein 18 homolog
            [Cucumis sativus] gi|449521663|ref|XP_004167849.1|
            PREDICTED: U3 small nucleolar RNA-associated protein 18
            homolog [Cucumis sativus]
          Length = 564

 Score =  631 bits (1627), Expect = e-178
 Identities = 333/565 (58%), Positives = 393/565 (69%), Gaps = 5/565 (0%)
 Frame = -3

Query: 1973 SLISQKTLRKKPVYELKQEENDEPLSLQESEKNEVAKESSLVDLKSKKRKNIHNXXXXXX 1794
            SLISQ       + ++ +E    P S   +       +S L   ++KKRK  H       
Sbjct: 2    SLISQNVAVVSSIEKVMEENTLSPSSPPRNADASDVDKSGLDTSRAKKRKKEHKIEDKQL 61

Query: 1793 XXXXXXXXXXXXLLFGSLYSPNEFGKEEEAGNEVKGPYSDPRLFFTDRTANGVVTVXXXX 1614
                         LFGSLYSP EFGK+EE  N        P L+  DR+A+  ++     
Sbjct: 62   VKEQKEMMKLENFLFGSLYSPVEFGKDEEQ-NGFNSEEKTPALYIMDRSADHSLSAYEDD 120

Query: 1613 XXXXXXDNNLVECIDKKPAWEDPEEKTIRIDIEKVNRMRKLKTKEDETSICGSD---RLR 1443
                    N  E   +KP W D EE+   ++I  V+R+RKL+ +E E SI GS+   RLR
Sbjct: 121  YGLLDESTNKEEHQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEHENSISGSEYVSRLR 180

Query: 1442 AYHVKTNPPPKWAQRGSGPIHDDE--SDEEYGALVDQAVEVNQDNKSILQTNEDLVVKSR 1269
            A H K NP  +WAQ  +    DD+  SD+E    +    +       IL+T+E LVVKS 
Sbjct: 181  AQHAKINPGTEWAQLDAQSRGDDDLSSDDENAVALAGGYDNVDSIDDILRTSEKLVVKSG 240

Query: 1268 VKLLPGILEYSRLVDANAEDPSNSAINSVQFHRNXXXXXXXXXXXXXRFFQVDGKRNTMI 1089
             KL+PG+L YSRLVDANAE+PSN  INSVQFHRN             RFFQ+DGKRNT I
Sbjct: 241  GKLMPGLLGYSRLVDANAEEPSNGPINSVQFHRNSQLLLATGLDRKLRFFQIDGKRNTKI 300

Query: 1088 QSIFLEDCPIRKATFLPDGSQVIVGGRRKFFYSFDLAHAKFDRIGPLVGREEKSLEVFDV 909
            QSIFLEDCPIRKA+FLPDGSQVI+ GRRKFFYS DL  AK D+IGPLVGREEKSLE F++
Sbjct: 301  QSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLEAFEI 360

Query: 908  SPDSRTIAFLGNEGYILLVSCKTKELIGTLKMNGSARSLAFTDDGRQLLSSGGDGHIYHW 729
            SPDS TIAF+GNEGYILLVS KTKELIGTLKMNG+ RSLAF DDGRQLLSSGGDG IYHW
Sbjct: 361  SPDSSTIAFMGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDGQIYHW 420

Query: 728  DLRTRMCFHKAVDEGCIMGSALSTSPNGALFAAGSSSGIVNIYNQEEFLGGKRKPMKTIE 549
            DLRTR C HKAVDEGCI G+AL TSPNG LFAAGS+SGIVNIYN++EFLGGK+KP+K IE
Sbjct: 421  DLRTRTCIHKAVDEGCINGTALCTSPNG-LFAAGSNSGIVNIYNRQEFLGGKKKPLKAIE 479

Query: 548  NLTTRVDYLKFNHDAQILAICSTMQKNSLKLVHMPSFTVFSNWPPPKQTLRHPRCLDFSP 369
            NLTT+VD+LKFNHDAQILAICS M+++SLKL+H+PSFT+FSNWPPPK+ L++P CLDFSP
Sbjct: 480  NLTTKVDFLKFNHDAQILAICSRMKQSSLKLIHIPSFTIFSNWPPPKKNLQYPSCLDFSP 539

Query: 368  GGGFMATGNADGKVFLYKLHHYQHA 294
             GG+MA GNA GKV LYKLHHY HA
Sbjct: 540  EGGYMAVGNAAGKVLLYKLHHYHHA 564