BLASTX nr result

ID: Coptis24_contig00011595 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011595
         (1016 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31217.3| unnamed protein product [Vitis vinifera]              123   8e-26
ref|XP_002269480.1| PREDICTED: nucleolar MIF4G domain-containing...   123   8e-26
emb|CAN80269.1| hypothetical protein VITISV_020031 [Vitis vinifera]   123   8e-26
ref|XP_004173084.1| PREDICTED: LOW QUALITY PROTEIN: nucleolar MI...   122   2e-25
ref|XP_004149114.1| PREDICTED: nucleolar MIF4G domain-containing...   122   2e-25

>emb|CBI31217.3| unnamed protein product [Vitis vinifera]
          Length = 536

 Score =  123 bits (308), Expect = 8e-26
 Identities = 66/88 (75%), Positives = 76/88 (86%), Gaps = 1/88 (1%)
 Frame = +3

Query: 306 YATGFVAFVAGMACLVGVAFSSKLIASLAKSFEDEYMKEDNMSLRNLTLLLS-*YTFGVC 482
           YA  F AFVAGMACLVG+ FS+KL+ASLAKSFEDEY+KEDN+SLRNLTLLL+  Y F V 
Sbjct: 105 YAAVFAAFVAGMACLVGIDFSAKLLASLAKSFEDEYIKEDNLSLRNLTLLLAYLYIFDVF 164

Query: 483 SSDVIYDFLSILNKRLLEIDVSNILTIL 566
           +SD+IYDFL I +K+LLEIDVS ILTIL
Sbjct: 165 ASDLIYDFLIIRSKQLLEIDVSTILTIL 192


>ref|XP_002269480.1| PREDICTED: nucleolar MIF4G domain-containing protein 1 [Vitis
           vinifera]
          Length = 700

 Score =  123 bits (308), Expect = 8e-26
 Identities = 66/88 (75%), Positives = 76/88 (86%), Gaps = 1/88 (1%)
 Frame = +3

Query: 306 YATGFVAFVAGMACLVGVAFSSKLIASLAKSFEDEYMKEDNMSLRNLTLLLS-*YTFGVC 482
           YA  F AFVAGMACLVG+ FS+KL+ASLAKSFEDEY+KEDN+SLRNLTLLL+  Y F V 
Sbjct: 269 YAAVFAAFVAGMACLVGIDFSAKLLASLAKSFEDEYIKEDNLSLRNLTLLLAYLYIFDVF 328

Query: 483 SSDVIYDFLSILNKRLLEIDVSNILTIL 566
           +SD+IYDFL I +K+LLEIDVS ILTIL
Sbjct: 329 ASDLIYDFLIIRSKQLLEIDVSTILTIL 356


>emb|CAN80269.1| hypothetical protein VITISV_020031 [Vitis vinifera]
          Length = 700

 Score =  123 bits (308), Expect = 8e-26
 Identities = 66/88 (75%), Positives = 76/88 (86%), Gaps = 1/88 (1%)
 Frame = +3

Query: 306 YATGFVAFVAGMACLVGVAFSSKLIASLAKSFEDEYMKEDNMSLRNLTLLLS-*YTFGVC 482
           YA  F AFVAGMACLVG+ FS+KL+ASLAKSFEDEY+KEDN+SLRNLTLLL+  Y F V 
Sbjct: 269 YAAVFAAFVAGMACLVGIDFSAKLLASLAKSFEDEYIKEDNLSLRNLTLLLAYLYIFDVF 328

Query: 483 SSDVIYDFLSILNKRLLEIDVSNILTIL 566
           +SD+IYDFL I +K+LLEIDVS ILTIL
Sbjct: 329 ASDLIYDFLIIRSKQLLEIDVSTILTIL 356


>ref|XP_004173084.1| PREDICTED: LOW QUALITY PROTEIN: nucleolar MIF4G domain-containing
           protein 1-like, partial [Cucumis sativus]
          Length = 692

 Score =  122 bits (305), Expect = 2e-25
 Identities = 63/88 (71%), Positives = 74/88 (84%), Gaps = 1/88 (1%)
 Frame = +3

Query: 306 YATGFVAFVAGMACLVGVAFSSKLIASLAKSFEDEYMKEDNMSLRNLTLLLS*Y-TFGVC 482
           YA  F +FVAGM CLVG  FS++L+ASLAK+FEDEY+ EDN+SLRNLTLLLS    FGVC
Sbjct: 261 YAAVFASFVAGMGCLVGTDFSARLMASLAKTFEDEYLNEDNLSLRNLTLLLSYLCVFGVC 320

Query: 483 SSDVIYDFLSILNKRLLEIDVSNILTIL 566
           +SD+IYDFL IL+KRL EIDVS ILT+L
Sbjct: 321 ASDLIYDFLIILSKRLTEIDVSTILTVL 348


>ref|XP_004149114.1| PREDICTED: nucleolar MIF4G domain-containing protein 1-like
           [Cucumis sativus]
          Length = 688

 Score =  122 bits (305), Expect = 2e-25
 Identities = 63/88 (71%), Positives = 74/88 (84%), Gaps = 1/88 (1%)
 Frame = +3

Query: 306 YATGFVAFVAGMACLVGVAFSSKLIASLAKSFEDEYMKEDNMSLRNLTLLLS*Y-TFGVC 482
           YA  F +FVAGM CLVG  FS++L+ASLAK+FEDEY+ EDN+SLRNLTLLLS    FGVC
Sbjct: 257 YAAVFASFVAGMGCLVGTDFSARLMASLAKTFEDEYLNEDNLSLRNLTLLLSYLCVFGVC 316

Query: 483 SSDVIYDFLSILNKRLLEIDVSNILTIL 566
           +SD+IYDFL IL+KRL EIDVS ILT+L
Sbjct: 317 ASDLIYDFLIILSKRLTEIDVSTILTVL 344


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