BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011425
         (1968 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32449.3| unnamed protein product [Vitis vinifera]              794   0.0  
ref|XP_002281969.1| PREDICTED: pentatricopeptide repeat-containi...   794   0.0  
ref|XP_002521838.1| pentatricopeptide repeat-containing protein,...   752   0.0  
ref|XP_004171087.1| PREDICTED: pentatricopeptide repeat-containi...   717   0.0  
ref|XP_004152074.1| PREDICTED: pentatricopeptide repeat-containi...   716   0.0  

>emb|CBI32449.3| unnamed protein product [Vitis vinifera]
          Length = 790

 Score =  794 bits (2051), Expect = 0.0
 Identities = 381/562 (67%), Positives = 467/562 (83%), Gaps = 1/562 (0%)
 Frame = -1

Query: 1968 SSPIQGCLEEACGIFNRMIQFGGYKPRLSLHNSLFKALVSKPGGTSKYYLKQAEFVYHNM 1789
            S+ +QGCL+EACGI+NRMIQ GGY+PRLSLHNSLF+ALV +PGG+SKY+LKQAEF++HN+
Sbjct: 235  SASVQGCLDEACGIYNRMIQLGGYQPRLSLHNSLFRALVGQPGGSSKYFLKQAEFIFHNL 294

Query: 1788 VTSGLDVSKNIYAGLIWLHSYQDVIDTERIVALRGEMKQVGVEEEKDVLVSILRAYSKQG 1609
            VT G ++ K++Y GLIWLHSYQD ID ERI +LR EM+  G+EE +DVL+SILRA SK+G
Sbjct: 295  VTFGFEIHKDVYGGLIWLHSYQDTIDRERIASLREEMQLAGIEESRDVLLSILRACSKEG 354

Query: 1608 DVEEVERTWLKLLTSDCSLPSQAFVHRMEVYAKVGEPTKSLEVFRAMQGT-NSTNVVAYH 1432
            DVEE E+TWLKLL SDC++PSQ FV+RMEVYAKVGEP KSLE+FR MQ    ST+VVAYH
Sbjct: 355  DVEEAEKTWLKLLHSDCAIPSQGFVYRMEVYAKVGEPMKSLEIFREMQEQLGSTSVVAYH 414

Query: 1431 KIIEVMCEAQEIEIAESLVNDFVKSGMKPLIPAYVELMNMYLKLNLHEKLEAIFTQYLEK 1252
            KIIEV+ +AQEIE+ ESL+ +F+ SGMKPL+P+Y++LMNMY  L+LH+KLEA F + LEK
Sbjct: 415  KIIEVLSKAQEIELVESLMTEFINSGMKPLMPSYIDLMNMYFNLSLHDKLEAAFYECLEK 474

Query: 1251 CQPNRAVFNIYLESLVRLGNHNKAMEIFNQMYSNGAIGVNSRSCNTILSGYLSSGQYIEA 1072
            C+PNRA++NIY++SLV++GN +KA EIFNQMYSNGAIGVN++SCNTILSGYLS G Y++A
Sbjct: 475  CRPNRAIYNIYMDSLVQIGNLDKAEEIFNQMYSNGAIGVNTKSCNTILSGYLSCGDYLKA 534

Query: 1071 EKIYDLMCLKKYDIDPSLMEKLDFVLSLSRKSFKKPTSLKLSKDQXXXXXXXXXXXXXXE 892
            EKIYDLMC KKY ID  LMEKLD+VLSLSRK  K+P SLKLSK+Q              E
Sbjct: 535  EKIYDLMCQKKYAIDAPLMEKLDYVLSLSRKVVKRPVSLKLSKEQREILIGLLLGGLQME 594

Query: 891  SDEARKNHALHFEFSKSSSVHSVLKRHIHDHYHEWLNSFSRETDGDQSIPDRFSTIAHTY 712
            SDE RKNH ++FEF+++S  HSVL+RHIH+ YHEWLNS S+ +D +  +P +FSTI+H+Y
Sbjct: 595  SDEERKNHVIYFEFNENSGAHSVLRRHIHEQYHEWLNSSSKLSDDNDDVPYKFSTISHSY 654

Query: 711  FSFYADQFWPKGRPVIPKLIHRWLSPRVLAYWYMYGGYRTSSGDILLKLKGGTREDVEKI 532
            F FYADQFWP+GRP+IPKLIHRWLSPRVLAYWYMYGG+RTSSGDILLKLK G+RE VEK+
Sbjct: 655  FGFYADQFWPRGRPMIPKLIHRWLSPRVLAYWYMYGGHRTSSGDILLKLK-GSREGVEKV 713

Query: 531  VMALKAKSLDCRVKRKGRVFWIGFLGSNSVWFWKLTELYILDDLRELLRADVQDLGNDGA 352
            V  LKA+S+DCRVKRKG VFWIG LGSNS WFWKL E YILDD+++ ++A  Q+      
Sbjct: 714  VRTLKAQSMDCRVKRKGTVFWIGLLGSNSTWFWKLIEPYILDDVKDFVKAGCQN------ 767

Query: 351  EIQDINFDSGSDSDEKASDGSD 286
                I+F SGSD+DE A+D SD
Sbjct: 768  ---TISFGSGSDTDENAADYSD 786


>ref|XP_002281969.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15820-like
            [Vitis vinifera]
          Length = 823

 Score =  794 bits (2051), Expect = 0.0
 Identities = 381/562 (67%), Positives = 467/562 (83%), Gaps = 1/562 (0%)
 Frame = -1

Query: 1968 SSPIQGCLEEACGIFNRMIQFGGYKPRLSLHNSLFKALVSKPGGTSKYYLKQAEFVYHNM 1789
            S+ +QGCL+EACGI+NRMIQ GGY+PRLSLHNSLF+ALV +PGG+SKY+LKQAEF++HN+
Sbjct: 268  SASVQGCLDEACGIYNRMIQLGGYQPRLSLHNSLFRALVGQPGGSSKYFLKQAEFIFHNL 327

Query: 1788 VTSGLDVSKNIYAGLIWLHSYQDVIDTERIVALRGEMKQVGVEEEKDVLVSILRAYSKQG 1609
            VT G ++ K++Y GLIWLHSYQD ID ERI +LR EM+  G+EE +DVL+SILRA SK+G
Sbjct: 328  VTFGFEIHKDVYGGLIWLHSYQDTIDRERIASLREEMQLAGIEESRDVLLSILRACSKEG 387

Query: 1608 DVEEVERTWLKLLTSDCSLPSQAFVHRMEVYAKVGEPTKSLEVFRAMQGT-NSTNVVAYH 1432
            DVEE E+TWLKLL SDC++PSQ FV+RMEVYAKVGEP KSLE+FR MQ    ST+VVAYH
Sbjct: 388  DVEEAEKTWLKLLHSDCAIPSQGFVYRMEVYAKVGEPMKSLEIFREMQEQLGSTSVVAYH 447

Query: 1431 KIIEVMCEAQEIEIAESLVNDFVKSGMKPLIPAYVELMNMYLKLNLHEKLEAIFTQYLEK 1252
            KIIEV+ +AQEIE+ ESL+ +F+ SGMKPL+P+Y++LMNMY  L+LH+KLEA F + LEK
Sbjct: 448  KIIEVLSKAQEIELVESLMTEFINSGMKPLMPSYIDLMNMYFNLSLHDKLEAAFYECLEK 507

Query: 1251 CQPNRAVFNIYLESLVRLGNHNKAMEIFNQMYSNGAIGVNSRSCNTILSGYLSSGQYIEA 1072
            C+PNRA++NIY++SLV++GN +KA EIFNQMYSNGAIGVN++SCNTILSGYLS G Y++A
Sbjct: 508  CRPNRAIYNIYMDSLVQIGNLDKAEEIFNQMYSNGAIGVNTKSCNTILSGYLSCGDYLKA 567

Query: 1071 EKIYDLMCLKKYDIDPSLMEKLDFVLSLSRKSFKKPTSLKLSKDQXXXXXXXXXXXXXXE 892
            EKIYDLMC KKY ID  LMEKLD+VLSLSRK  K+P SLKLSK+Q              E
Sbjct: 568  EKIYDLMCQKKYAIDAPLMEKLDYVLSLSRKVVKRPVSLKLSKEQREILIGLLLGGLQME 627

Query: 891  SDEARKNHALHFEFSKSSSVHSVLKRHIHDHYHEWLNSFSRETDGDQSIPDRFSTIAHTY 712
            SDE RKNH ++FEF+++S  HSVL+RHIH+ YHEWLNS S+ +D +  +P +FSTI+H+Y
Sbjct: 628  SDEERKNHVIYFEFNENSGAHSVLRRHIHEQYHEWLNSSSKLSDDNDDVPYKFSTISHSY 687

Query: 711  FSFYADQFWPKGRPVIPKLIHRWLSPRVLAYWYMYGGYRTSSGDILLKLKGGTREDVEKI 532
            F FYADQFWP+GRP+IPKLIHRWLSPRVLAYWYMYGG+RTSSGDILLKLK G+RE VEK+
Sbjct: 688  FGFYADQFWPRGRPMIPKLIHRWLSPRVLAYWYMYGGHRTSSGDILLKLK-GSREGVEKV 746

Query: 531  VMALKAKSLDCRVKRKGRVFWIGFLGSNSVWFWKLTELYILDDLRELLRADVQDLGNDGA 352
            V  LKA+S+DCRVKRKG VFWIG LGSNS WFWKL E YILDD+++ ++A  Q+      
Sbjct: 747  VRTLKAQSMDCRVKRKGTVFWIGLLGSNSTWFWKLIEPYILDDVKDFVKAGCQN------ 800

Query: 351  EIQDINFDSGSDSDEKASDGSD 286
                I+F SGSD+DE A+D SD
Sbjct: 801  ---TISFGSGSDTDENAADYSD 819


>ref|XP_002521838.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223538876|gb|EEF40474.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 835

 Score =  752 bits (1942), Expect = 0.0
 Identities = 365/554 (65%), Positives = 452/554 (81%), Gaps = 1/554 (0%)
 Frame = -1

Query: 1968 SSPIQGCLEEACGIFNRMIQFGGYKPRLSLHNSLFKALVSKPGGTSKYYLKQAEFVYHNM 1789
            S+P+QGCLEEAC I+NRMIQ GGY+PRLSLHNSLF+ALVSKPGG +K+YLKQAEF+YHN+
Sbjct: 279  SAPVQGCLEEACTIYNRMIQLGGYQPRLSLHNSLFRALVSKPGGFAKHYLKQAEFIYHNL 338

Query: 1788 VTSGLDVSKNIYAGLIWLHSYQDVIDTERIVALRGEMKQVGVEEEKDVLVSILRAYSKQG 1609
            VTSGL++  +IY GLIWLHSYQD ID  RI ++R EMKQ G+ E +++L+SI+RA SK+G
Sbjct: 339  VTSGLEIQNDIYGGLIWLHSYQDNIDKVRIASIREEMKQAGIMEGREILLSIMRACSKEG 398

Query: 1608 DVEEVERTWLKLLTSDCSLPSQAFVHRMEVYAKVGEPTKSLEVFRAMQGT-NSTNVVAYH 1432
            DVEE ERTWLKLL  D  LP+QAFV+RMEV+AK+GE  KSLE FR MQ    S+++ AYH
Sbjct: 399  DVEEAERTWLKLLQVDGGLPTQAFVYRMEVFAKLGEHMKSLETFREMQELLGSSSIAAYH 458

Query: 1431 KIIEVMCEAQEIEIAESLVNDFVKSGMKPLIPAYVELMNMYLKLNLHEKLEAIFTQYLEK 1252
            KIIEV+ +AQE+E+AESL+ +F+KSG+KPL+P++ +LMNMYL LNLHEKLE+ F   LE 
Sbjct: 459  KIIEVVSQAQEVELAESLMQEFIKSGLKPLMPSFTDLMNMYLNLNLHEKLESTFFACLEN 518

Query: 1251 CQPNRAVFNIYLESLVRLGNHNKAMEIFNQMYSNGAIGVNSRSCNTILSGYLSSGQYIEA 1072
            C+PNR ++N+YL+SLV++GN +KA E FN M SN A+GVN RSCNTIL GYLSSG Y++A
Sbjct: 519  CRPNRNIYNVYLDSLVKVGNLDKAEEAFNNMCSNEAVGVNIRSCNTILRGYLSSGDYVKA 578

Query: 1071 EKIYDLMCLKKYDIDPSLMEKLDFVLSLSRKSFKKPTSLKLSKDQXXXXXXXXXXXXXXE 892
            EKIYDLMC KKYDI+PSLMEKLD+VLSLSRK  KKP SLKLSKDQ              E
Sbjct: 579  EKIYDLMCQKKYDIEPSLMEKLDYVLSLSRKVVKKPLSLKLSKDQREILVGLLLGGLRVE 638

Query: 891  SDEARKNHALHFEFSKSSSVHSVLKRHIHDHYHEWLNSFSRETDGDQSIPDRFSTIAHTY 712
            SD+ RK H + FEF+++SS H++L+RH++D YHEWL+   + +DG      RFSTI+H+Y
Sbjct: 639  SDDNRKKHMIRFEFNENSSTHAILRRHLYDKYHEWLHPSCKLSDGSDGASYRFSTISHSY 698

Query: 711  FSFYADQFWPKGRPVIPKLIHRWLSPRVLAYWYMYGGYRTSSGDILLKLKGGTREDVEKI 532
            FSFYA+QFWPKG+P+IPKLIHRWLSP+VLA+WYMY G+RTSSGDILLKLK G+RE VEK+
Sbjct: 699  FSFYAEQFWPKGQPMIPKLIHRWLSPQVLAFWYMYAGHRTSSGDILLKLK-GSREGVEKV 757

Query: 531  VMALKAKSLDCRVKRKGRVFWIGFLGSNSVWFWKLTELYILDDLRELLRADVQDLGNDGA 352
               LK+KSL+C+VKRKGRVFWIGFLG++SVWFWKL E YILDDL+  L+A  Q L     
Sbjct: 758  FKTLKSKSLNCKVKRKGRVFWIGFLGNDSVWFWKLVEPYILDDLKLFLKAGDQTLEYSA- 816

Query: 351  EIQDINFDSGSDSD 310
              ++INFDSGSDS+
Sbjct: 817  --ENINFDSGSDSE 828


>ref|XP_004171087.1| PREDICTED: pentatricopeptide repeat-containing protein
            At2g15820-like, partial [Cucumis sativus]
          Length = 747

 Score =  717 bits (1850), Expect = 0.0
 Identities = 346/558 (62%), Positives = 442/558 (79%)
 Frame = -1

Query: 1968 SSPIQGCLEEACGIFNRMIQFGGYKPRLSLHNSLFKALVSKPGGTSKYYLKQAEFVYHNM 1789
            S+P+QGC+EEA  I+NRMIQ GGY+PRLSLH+SLF+ALVSKPG  SK++LKQAEF+YHN+
Sbjct: 191  SAPVQGCVEEASTIYNRMIQLGGYQPRLSLHSSLFRALVSKPGDLSKHHLKQAEFIYHNL 250

Query: 1788 VTSGLDVSKNIYAGLIWLHSYQDVIDTERIVALRGEMKQVGVEEEKDVLVSILRAYSKQG 1609
            VTSGL++ K+IY GLIWLHSYQD ID ERIV+LR EM+Q G++EE++VL+SILRA SK G
Sbjct: 251  VTSGLELHKDIYGGLIWLHSYQDTIDRERIVSLRKEMQQAGIKEEREVLLSILRASSKMG 310

Query: 1608 DVEEVERTWLKLLTSDCSLPSQAFVHRMEVYAKVGEPTKSLEVFRAMQGTNSTNVVAYHK 1429
            DV E E+ W +L   D ++PSQAFV++MEVYAK+G+P K+LE+FR M+  NSTN  AY  
Sbjct: 311  DVMEAEKLWQELKYLDGNMPSQAFVYKMEVYAKMGKPMKALEIFREMEQLNSTNAAAYQT 370

Query: 1428 IIEVMCEAQEIEIAESLVNDFVKSGMKPLIPAYVELMNMYLKLNLHEKLEAIFTQYLEKC 1249
            II ++C+ Q IE+AES++  F++S +KPL PAYV+LMNM+  LNL +KLE  F+Q LEKC
Sbjct: 371  IIGILCKFQVIELAESIMAGFIESNLKPLTPAYVDLMNMFFNLNLDDKLELTFSQCLEKC 430

Query: 1248 QPNRAVFNIYLESLVRLGNHNKAMEIFNQMYSNGAIGVNSRSCNTILSGYLSSGQYIEAE 1069
            +PNR +++IYL+SLV++GN ++A EIF+QM +NG IG+N+RSCN IL GYL  G Y++AE
Sbjct: 431  KPNRTIYSIYLDSLVKVGNLDRAEEIFSQMETNGEIGINARSCNIILRGYLLCGNYMKAE 490

Query: 1068 KIYDLMCLKKYDIDPSLMEKLDFVLSLSRKSFKKPTSLKLSKDQXXXXXXXXXXXXXXES 889
            KIYDLMC K+YDIDP LMEKL+++LSLSRK  KKP SLKLSK+Q              ES
Sbjct: 491  KIYDLMCQKRYDIDPPLMEKLEYILSLSRKEVKKPMSLKLSKEQREILVGLLLGGLEIES 550

Query: 888  DEARKNHALHFEFSKSSSVHSVLKRHIHDHYHEWLNSFSRETDGDQSIPDRFSTIAHTYF 709
            DE RKNH + FEF ++   HSVL+RHI++ YH+WL+S S+ TDGD  IP +F T++H+YF
Sbjct: 551  DEERKNHRIQFEFHRNCKTHSVLRRHIYEQYHKWLHSASKLTDGDVDIPYKFCTVSHSYF 610

Query: 708  SFYADQFWPKGRPVIPKLIHRWLSPRVLAYWYMYGGYRTSSGDILLKLKGGTREDVEKIV 529
             FYADQFWP+GR  IP LIHRWLSPRVLAYWYMYGG RTSSGDILLKLK G+ E VEKIV
Sbjct: 611  GFYADQFWPRGRRAIPNLIHRWLSPRVLAYWYMYGGCRTSSGDILLKLK-GSHEGVEKIV 669

Query: 528  MALKAKSLDCRVKRKGRVFWIGFLGSNSVWFWKLTELYILDDLRELLRADVQDLGNDGAE 349
             +L+ KS+ C+VKRKG ++WIG LG+N+ WFWKL E +ILD L+E  +AD  +L      
Sbjct: 670  KSLREKSIHCKVKRKGNMYWIGLLGTNATWFWKLIEPFILDYLKESTQADSLNLVGVLNG 729

Query: 348  IQDINFDSGSDSDEKASD 295
             ++INFDS SDS E+ S+
Sbjct: 730  SENINFDSESDSVEETSN 747


>ref|XP_004152074.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15820-like
            [Cucumis sativus]
          Length = 797

 Score =  716 bits (1848), Expect = 0.0
 Identities = 345/558 (61%), Positives = 442/558 (79%)
 Frame = -1

Query: 1968 SSPIQGCLEEACGIFNRMIQFGGYKPRLSLHNSLFKALVSKPGGTSKYYLKQAEFVYHNM 1789
            S+P+QGC+EEA  I+NRMIQ GGY+PRLSLH+SLF+ALVSKPG  SK++LKQAEF+YHN+
Sbjct: 241  SAPVQGCIEEASTIYNRMIQLGGYQPRLSLHSSLFRALVSKPGDLSKHHLKQAEFIYHNL 300

Query: 1788 VTSGLDVSKNIYAGLIWLHSYQDVIDTERIVALRGEMKQVGVEEEKDVLVSILRAYSKQG 1609
            VTSGL++ K++Y GLIWLHSYQD ID ERIV+LR EM+Q G++EE++VL+SILRA SK G
Sbjct: 301  VTSGLELHKDMYGGLIWLHSYQDTIDRERIVSLRKEMQQAGIKEEREVLLSILRASSKMG 360

Query: 1608 DVEEVERTWLKLLTSDCSLPSQAFVHRMEVYAKVGEPTKSLEVFRAMQGTNSTNVVAYHK 1429
            DV E E+ W +L   D ++PSQAFV++MEVYAK+G+P K+LE+FR M+  NSTN  AY  
Sbjct: 361  DVMEAEKLWQELKYLDGNMPSQAFVYKMEVYAKMGKPMKALEIFREMEQLNSTNAAAYQT 420

Query: 1428 IIEVMCEAQEIEIAESLVNDFVKSGMKPLIPAYVELMNMYLKLNLHEKLEAIFTQYLEKC 1249
            II ++C+ Q IE+AES++  F++S +KPL PAYV+LMNM+  LNL +KLE  F+Q LEKC
Sbjct: 421  IIGILCKFQVIELAESIMAGFIESNLKPLTPAYVDLMNMFFNLNLDDKLELTFSQCLEKC 480

Query: 1248 QPNRAVFNIYLESLVRLGNHNKAMEIFNQMYSNGAIGVNSRSCNTILSGYLSSGQYIEAE 1069
            +PNR +++IYL+SLV++GN ++A EIF+QM +NG IG+N+RSCN IL GYL  G Y++AE
Sbjct: 481  KPNRTIYSIYLDSLVKVGNLDRAEEIFSQMETNGEIGINARSCNIILRGYLLCGNYMKAE 540

Query: 1068 KIYDLMCLKKYDIDPSLMEKLDFVLSLSRKSFKKPTSLKLSKDQXXXXXXXXXXXXXXES 889
            KIYDLMC K+YDIDP LMEKL+++LSLSRK  KKP SLKLSK+Q              ES
Sbjct: 541  KIYDLMCQKRYDIDPPLMEKLEYILSLSRKEVKKPMSLKLSKEQREILVGLLLGGLEIES 600

Query: 888  DEARKNHALHFEFSKSSSVHSVLKRHIHDHYHEWLNSFSRETDGDQSIPDRFSTIAHTYF 709
            D+ RKNH + FEF ++   HSVL+RHI++ YH+WL+S S+ TDGD  IP +F T++H+YF
Sbjct: 601  DDERKNHRIQFEFHRNCKTHSVLRRHIYEQYHKWLHSASKLTDGDVDIPYKFCTVSHSYF 660

Query: 708  SFYADQFWPKGRPVIPKLIHRWLSPRVLAYWYMYGGYRTSSGDILLKLKGGTREDVEKIV 529
             FYADQFWP+GR  IP LIHRWLSPRVLAYWYMYGG RTSSGDILLKLK G+ E VEKIV
Sbjct: 661  GFYADQFWPRGRRAIPNLIHRWLSPRVLAYWYMYGGCRTSSGDILLKLK-GSHEGVEKIV 719

Query: 528  MALKAKSLDCRVKRKGRVFWIGFLGSNSVWFWKLTELYILDDLRELLRADVQDLGNDGAE 349
             +L+ KS+ C+VKRKG ++WIG LGSN+ WFWKL E +ILD L+E  +AD  +L      
Sbjct: 720  KSLREKSIHCKVKRKGNMYWIGLLGSNATWFWKLIEPFILDYLKESTQADSLNLVGVLNG 779

Query: 348  IQDINFDSGSDSDEKASD 295
             ++INFDS SDS E+ S+
Sbjct: 780  SENINFDSESDSVEETSN 797