BLASTX nr result

ID: Coptis24_contig00011401 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011401
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272177.2| PREDICTED: vacuolar protein sorting-associat...    70   2e-10
emb|CBI39019.3| unnamed protein product [Vitis vinifera]               70   2e-10
ref|XP_002317064.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
gb|AEJ72554.1| putative vacuolar protein sorting [Malus x domest...    62   6e-08
ref|XP_002526977.1| vacuolar protein sorting, putative [Ricinus ...    61   8e-08

>ref|XP_002272177.2| PREDICTED: vacuolar protein sorting-associated protein 54-like
           [Vitis vinifera]
          Length = 1041

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 42/76 (55%), Positives = 50/76 (65%), Gaps = 7/76 (9%)
 Frame = +2

Query: 2   WIMYNLDDCFAADSVATSPALGAAVAESGQESS-------PYSLQRNANKFPPIHAKGNE 160
           WIM NLDD +AADSVA + ALGAAVAE+ QES         YS QRNA K   I  K N+
Sbjct: 491 WIMCNLDDHYAADSVAAAIALGAAVAEAAQESDTQISSFLSYSPQRNAGKI-NIQGKTND 549

Query: 161 TSSPSNMARFFRGLIL 208
            +SPSNM++ FR  +L
Sbjct: 550 AASPSNMSKNFRADVL 565


>emb|CBI39019.3| unnamed protein product [Vitis vinifera]
          Length = 903

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 42/76 (55%), Positives = 50/76 (65%), Gaps = 7/76 (9%)
 Frame = +2

Query: 2   WIMYNLDDCFAADSVATSPALGAAVAESGQESS-------PYSLQRNANKFPPIHAKGNE 160
           WIM NLDD +AADSVA + ALGAAVAE+ QES         YS QRNA K   I  K N+
Sbjct: 388 WIMCNLDDHYAADSVAAAIALGAAVAEAAQESDTQISSFLSYSPQRNAGKI-NIQGKTND 446

Query: 161 TSSPSNMARFFRGLIL 208
            +SPSNM++ FR  +L
Sbjct: 447 AASPSNMSKNFRADVL 462


>ref|XP_002317064.1| predicted protein [Populus trichocarpa] gi|222860129|gb|EEE97676.1|
           predicted protein [Populus trichocarpa]
          Length = 830

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 7/76 (9%)
 Frame = +2

Query: 2   WIMYNLDDCFAADSVATSPALGAAVAESGQESS-------PYSLQRNANKFPPIHAKGNE 160
           WIM ++D  +AADSVA + A+GAA AE+  ES        P+S QR+ +KF     K N+
Sbjct: 311 WIMCSVDGHYAADSVAAAIAVGAAAAETAHESDGLGGSLLPFSPQRSTSKFASSQLKAND 370

Query: 161 TSSPSNMARFFRGLIL 208
            +SPSN++R FR  +L
Sbjct: 371 AASPSNISRNFRADVL 386


>gb|AEJ72554.1| putative vacuolar protein sorting [Malus x domestica]
          Length = 1269

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 7/76 (9%)
 Frame = +2

Query: 2   WIMYNLDDCFAADSVATSPALGAAVAESGQESS-------PYSLQRNANKFPPIHAKGNE 160
           WIM NLD  +AA+SVA + A+GAA AE+ QE         PYS  R A K   I  K N+
Sbjct: 525 WIMCNLDGHYAANSVAAAIAIGAAAAETAQEGDGQGGLLMPYSPHRVATKALSIQGKAND 584

Query: 161 TSSPSNMARFFRGLIL 208
            +SPSN+++ FR  +L
Sbjct: 585 ATSPSNISKNFRADVL 600


>ref|XP_002526977.1| vacuolar protein sorting, putative [Ricinus communis]
           gi|223533668|gb|EEF35404.1| vacuolar protein sorting,
           putative [Ricinus communis]
          Length = 1046

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 7/76 (9%)
 Frame = +2

Query: 2   WIMYNLDDCFAADSVATSPALGAAVAESGQESS-------PYSLQRNANKFPPIHAKGNE 160
           WI+ NLD  +AADSVA + A+GAA AE+ QES         +  QR+A K P   AK N+
Sbjct: 495 WIICNLDGHYAADSVAAAIAIGAAAAEAAQESDSQHGSVPQFLPQRSAAKVPSSQAKAND 554

Query: 161 TSSPSNMARFFRGLIL 208
            ++ SNM+R FR  +L
Sbjct: 555 AATSSNMSRNFRADVL 570


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