BLASTX nr result
ID: Coptis24_contig00011142
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00011142
(1716 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002521836.1| RNA-binding protein Nova-1, putative [Ricinu... 366 9e-99
ref|XP_004159922.1| PREDICTED: uncharacterized LOC101221280 [Cuc... 326 1e-86
ref|XP_004137120.1| PREDICTED: uncharacterized protein LOC101221... 326 1e-86
ref|XP_002278761.1| PREDICTED: uncharacterized protein LOC100259... 315 3e-83
ref|NP_001130556.1| uncharacterized protein LOC100191655 [Zea ma... 304 4e-80
>ref|XP_002521836.1| RNA-binding protein Nova-1, putative [Ricinus communis]
gi|223538874|gb|EEF40472.1| RNA-binding protein Nova-1,
putative [Ricinus communis]
Length = 544
Score = 366 bits (940), Expect = 9e-99
Identities = 231/547 (42%), Positives = 289/547 (52%), Gaps = 11/547 (2%)
Frame = +1
Query: 28 SEGGNKRKTVELPDSIELVKQKVQAYVSRLVSDAETKRPRXXXXXXXXXXXXXXXXXDAK 207
S G KRK D EL KQ+ Q SR+ +DA+ KRPR D
Sbjct: 11 SNDGGKRKL----DVFELAKQRAQEIASRIANDADLKRPRLVSDSSP----------DPP 56
Query: 208 KLTENTQSGP----YPYMTQASSNYASQGSSKKIDIPNGKVGVIIGRAGDTIKSLQLQSG 375
L N+ P Y +Q S + SQG+SK+I IP+GKVGV+IG+ G+TIK++QLQSG
Sbjct: 57 SLYSNSIPAPPSYTVSYASQQSQYHGSQGTSKRITIPSGKVGVVIGKGGETIKNIQLQSG 116
Query: 376 ARIQVDKDTEVDPYSQIRGVQLFGTPEQISRAEQLIKDVIAESDAGGPGSSAARGFNSVP 555
A+IQ+ KD + DP+S R V+L GT EQISRAE+LI DVIAE+DAGG SSA G N+
Sbjct: 117 AKIQITKDQDADPHSLTRDVELMGTSEQISRAEELINDVIAETDAGGSASSAVHGLNTKQ 176
Query: 556 EGGEHFILKVPNNKVAMVIGKGGETIKSMQSKSGARIQVIPLRLPPGDTSTERNVHIDGT 735
G E F ++VPN+KV ++IGKGGETIK MQS+SGAR+Q+IPL LPPGD +TER V+I+G
Sbjct: 177 PGAEQFSIRVPNDKVGLLIGKGGETIKYMQSRSGARMQIIPLHLPPGDPTTERTVYINGL 236
Query: 736 QEQIEFAKQLVNEVISENRVRNPPVGNNQMQQAYYPPANWVPPVQSSXXXXXXXXXXXXX 915
EQIE AK+LVN+V++ R+ +P ++ Q Y NW P Q+
Sbjct: 237 TEQIEAAKELVNDVLNGKRIIDPTGSSSYGQPTYPATGNWAQPGQTPMQQPQYGYAQPGN 296
Query: 916 XXXXXXXXXXXXXXXTVGWDQSN-SVAGPPQQSTG-NYYGQQNQTGSAAPNVNLSYGQTQ 1089
WDQSN + QQ G YYGQQ Q GSA +N SY QT
Sbjct: 297 QPTPPAYYGNYTQQP--AWDQSNPTTMSQTQQMAGYGYYGQQPQMGSAP--LNSSYNQTP 352
Query: 1090 S-TSQNYEQGYSHQPQGSGQNISGQVPPYDQQNSYVTSGYGPPNVSSQLDGTIPTQPYAT 1266
S Y YS Q GQNIS Q P +QQ Y TS YG VSSQ DG I +Q
Sbjct: 353 PVASSGYGNSYSQQTSNYGQNISSQTPTLEQQRPYATSNYGSAAVSSQSDGAISSQSTQA 412
Query: 1267 QPPAYQGYYGQSPAIAPTPAYGPQSYAGPLPPHPXXXXXXXXXXXXXXXPPAHPPAPLQS 1446
P Y Q A P + YAG PP + A
Sbjct: 413 APAYPPPAYNQQVA-DPQTYWTAAGYAGQPPPQ------------TGYDQTGYSQAGYGV 459
Query: 1447 QPPISQPVYGQAGYPPQPAPLQSNNFQGATAYGMTHPQMQAQPPPKT----YAAPLPYGA 1614
+QPVYGQ GYP QP+P +N QG G PQ++AQP + ++ L YGA
Sbjct: 460 SLSSNQPVYGQGGYPLQPSPAAANYAQGTNPLGYGQPQLEAQPQSQPSNNGHSQSLAYGA 519
Query: 1615 ERNGDNS 1635
E + NS
Sbjct: 520 EIHDGNS 526
>ref|XP_004159922.1| PREDICTED: uncharacterized LOC101221280 [Cucumis sativus]
Length = 516
Score = 326 bits (836), Expect = 1e-86
Identities = 220/506 (43%), Positives = 273/506 (53%), Gaps = 34/506 (6%)
Frame = +1
Query: 40 NKRKTVELPDSIELVKQKVQAYVSRLVSDAETKRPRXXXXXXXXXXXXXXXXXDAKKLT- 216
NKRK L ++I+L KQK Q V++LVS+AE+KRPR + T
Sbjct: 15 NKRK---LEENIQLAKQKAQEIVAKLVSNAESKRPRFEYEPPAPAPPPQNPPLSSSTFTV 71
Query: 217 -ENTQSGPYPYMTQASSNYASQGSSKKIDIPNGKVGVIIGRAGDTIKSLQLQSGARIQVD 393
TQ+GPY + Q +SKKI+IPN KVG+IIG+ G+TIK LQLQSGA+IQ+
Sbjct: 72 SSGTQAGPY---------HGFQTTSKKINIPNIKVGLIIGKGGETIKYLQLQSGAKIQIT 122
Query: 394 KDTEVDPYSQIRGVQLFGTPEQISRAEQLIKDVIAESDAGGPGSSAARGFNSVPEGGEHF 573
+D E DP S R V+L GT EQ+SRAEQLI +VIAE+D+GG S+ + NS G E F
Sbjct: 123 RDFEADPQSLTRDVELMGTSEQVSRAEQLINEVIAEADSGGSASTTNQAINSSQPGVEQF 182
Query: 574 ILKVPNNKVAMVIGKGGETIKSMQSKSGARIQVIPLRLPPGDTSTERNVHIDGTQEQIEF 753
++K+PNNKVA+VIGKGGETIKS+QSKS AR+Q+IPL LPPGDTSTER+V+I+G +EQIE
Sbjct: 183 VMKIPNNKVALVIGKGGETIKSIQSKSAARVQIIPLHLPPGDTSTERSVYINGLKEQIES 242
Query: 754 AKQLVNEVISENRVRNPPVGNNQMQQAYYPPANW-----VPPVQSSXXXXXXXXXXXXXX 918
AK+L+NEVIS R+ + + Q Y NW PP+Q
Sbjct: 243 AKELINEVISGKRLVSET--TSYAQPTYPSTNNWSQAGQQPPLQQQ--QPQYGYAAGTYP 298
Query: 919 XXXXXXXXXXXXXXTVGWDQSN-SVAGPPQQSTG-NYYGQQNQTGSAAPNV-NLSYGQTQ 1089
WDQSN S P QSTG NYYGQQ+Q GSA P + SYGQ
Sbjct: 299 PPQGPPYYSTYPAQVASWDQSNQSTVQPSDQSTGYNYYGQQSQVGSAPPQYHDYSYGQPA 358
Query: 1090 ST-SQNYEQGYSHQPQGSGQNISGQVPP-YDQQNSYVTSGYGP---PNVSSQLDGTIPTQ 1254
S+ + Y+Q YS Q GQ+PP YDQQN Y+ SG P P+ + +GT PT
Sbjct: 359 SSGTHGYDQSYSQQAPS-----YGQIPPSYDQQNMYLNSGSAPSALPSSNGTSEGTYPTA 413
Query: 1255 PY--ATQPPAYQ-----------------GYYGQSPAIAPTPAYGPQSYAGPLPPHPXXX 1377
Y +T YQ Y S A P YG Y PP P
Sbjct: 414 AYQASTGYWTYQTTDQTQSLPQTGNDQSGSYQTVSGGHAQPPVYGQSVY----PPPP--- 466
Query: 1378 XXXXXXXXXXXXPPAHPPAPLQSQPP 1455
PP AP QSQPP
Sbjct: 467 ----GVYSAPAPPPPEMVAPTQSQPP 488
>ref|XP_004137120.1| PREDICTED: uncharacterized protein LOC101221280 [Cucumis sativus]
Length = 516
Score = 326 bits (836), Expect = 1e-86
Identities = 220/506 (43%), Positives = 273/506 (53%), Gaps = 34/506 (6%)
Frame = +1
Query: 40 NKRKTVELPDSIELVKQKVQAYVSRLVSDAETKRPRXXXXXXXXXXXXXXXXXDAKKLT- 216
NKRK L ++I+L KQK Q V++LVS+AE+KRPR + T
Sbjct: 15 NKRK---LEENIQLAKQKAQEIVAKLVSNAESKRPRFEYEPPAPAPPPQNPPLSSSTFTV 71
Query: 217 -ENTQSGPYPYMTQASSNYASQGSSKKIDIPNGKVGVIIGRAGDTIKSLQLQSGARIQVD 393
TQ+GPY + Q +SKKI+IPN KVG+IIG+ G+TIK LQLQSGA+IQ+
Sbjct: 72 SSGTQAGPY---------HGFQTTSKKINIPNIKVGLIIGKGGETIKYLQLQSGAKIQIT 122
Query: 394 KDTEVDPYSQIRGVQLFGTPEQISRAEQLIKDVIAESDAGGPGSSAARGFNSVPEGGEHF 573
+D E DP S R V+L GT EQ+SRAEQLI +VIAE+D+GG S+ + NS G E F
Sbjct: 123 RDFEADPQSLTRDVELMGTSEQVSRAEQLINEVIAEADSGGSASTTNQAINSSQPGVEQF 182
Query: 574 ILKVPNNKVAMVIGKGGETIKSMQSKSGARIQVIPLRLPPGDTSTERNVHIDGTQEQIEF 753
++K+PNNKVA+VIGKGGETIKS+QSKS AR+Q+IPL LPPGDTSTER+V+I+G +EQIE
Sbjct: 183 VMKIPNNKVALVIGKGGETIKSIQSKSAARVQIIPLHLPPGDTSTERSVYINGLKEQIES 242
Query: 754 AKQLVNEVISENRVRNPPVGNNQMQQAYYPPANW-----VPPVQSSXXXXXXXXXXXXXX 918
AK+L+NEVIS R+ + + Q Y NW PP+Q
Sbjct: 243 AKELINEVISGKRLVSET--TSYAQPTYPSTNNWSQAGQQPPLQQQ--QPQYGYAAGTYP 298
Query: 919 XXXXXXXXXXXXXXTVGWDQSN-SVAGPPQQSTG-NYYGQQNQTGSAAPNV-NLSYGQTQ 1089
WDQSN S P QSTG NYYGQQ+Q GSA P + SYGQ
Sbjct: 299 PPQGPPYYSTYPAQVASWDQSNQSTVQPSDQSTGYNYYGQQSQVGSAPPQFHDYSYGQPA 358
Query: 1090 ST-SQNYEQGYSHQPQGSGQNISGQVPP-YDQQNSYVTSGYGP---PNVSSQLDGTIPTQ 1254
S+ + Y+Q YS Q GQ+PP YDQQN Y+ SG P P+ + +GT PT
Sbjct: 359 SSGTHGYDQSYSQQAPS-----YGQIPPSYDQQNMYLNSGSAPSALPSSNGTSEGTYPTA 413
Query: 1255 PY--ATQPPAYQ-----------------GYYGQSPAIAPTPAYGPQSYAGPLPPHPXXX 1377
Y +T YQ Y S A P YG Y PP P
Sbjct: 414 AYQASTGYWTYQTTDQTQSLPQTGNDQSGSYQTVSGGHAQPPVYGQSVY----PPPP--- 466
Query: 1378 XXXXXXXXXXXXPPAHPPAPLQSQPP 1455
PP AP QSQPP
Sbjct: 467 ----GVYSAPAPPPPEMVAPTQSQPP 488
>ref|XP_002278761.1| PREDICTED: uncharacterized protein LOC100259454 [Vitis vinifera]
Length = 690
Score = 315 bits (806), Expect = 3e-83
Identities = 233/598 (38%), Positives = 290/598 (48%), Gaps = 66/598 (11%)
Frame = +1
Query: 67 DSIELVKQKVQAYVSRLVSDA---ETKRPRXXXXXXXXXXXXXXXXXDAKKLTENTQSGP 237
D I+L KQ+ Q +RL S+A E KRPR D + + G
Sbjct: 62 DEIQLAKQRAQEIAARLFSNASNTEAKRPRVENGAGAGGFDSG----DKGFSSAPSDVGQ 117
Query: 238 YPYMTQASS---NYASQGSSKKIDIPNGKVGVIIGRAGDTIKSLQLQSGARIQVDKDTEV 408
P ++ S+ +Y QG+SKKIDIPNG+VGVIIG+ G+TIK LQLQSGA+IQV +D +
Sbjct: 118 KPMISTPSAIPVSYGYQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDA 177
Query: 409 DPYSQIRGVQLFGTPEQISRAEQLIKDVIAESDAGGPGSSAARGFNSVPEGGEHFILKVP 588
DP S R V+L GTP+QI++AEQLI DV++E++AGG G + R G E F++KVP
Sbjct: 178 DPNSPTRLVELMGTPDQIAKAEQLINDVLSEAEAGGSGIVSRRLTGQA--GSEQFVMKVP 235
Query: 589 NNKVAMVIGKGGETIKSMQSKSGARIQVIPLRLPPGDTSTERNVHIDGTQEQIEFAKQLV 768
NNKV ++IGKGGETIK+MQ+++GARIQVIPL LPPGDTS ER V IDGT EQIE AKQLV
Sbjct: 236 NNKVGLIIGKGGETIKNMQARTGARIQVIPLHLPPGDTSMERTVQIDGTSEQIESAKQLV 295
Query: 769 NEVISENRVRNPPVGNNQMQQAYY--PPANW-----VPPVQS---SXXXXXXXXXXXXXX 918
NEVISENR+RNP + QQ Y PP+ W PP+Q S
Sbjct: 296 NEVISENRIRNPAMAGGYPQQGYQARPPSGWGAPPGAPPMQQPGYSYAQPGSYPGPSPQY 355
Query: 919 XXXXXXXXXXXXXXTVGWDQSNSVAGPPQQSTG-----NYYGQQN-------QTGSAAPN 1062
GWDQ+ A PP Q T +YYGQQ G + P
Sbjct: 356 NMSQPAYAGYSQPNATGWDQT---AAPPSQQTTPGSGYDYYGQQQTQQQQQAHGGPSGPA 412
Query: 1063 VNLSYGQTQSTSQNYE---QGYSHQPQGSGQNIS------GQ---VPPYDQQNSY-VTSG 1203
N Y Q + Y QGY G G + GQ +P YDQQ Y +G
Sbjct: 413 DNSGYNYNQPPASGYNQQGQGYPQDGYGGGYHAPAPQPGYGQPQPIPGYDQQQGYNSATG 472
Query: 1204 YGPPNVSSQLDGTIPTQPYATQPPAYQGYYGQSPAIAPTPAYGPQSYAGPLP-PHPXXXX 1380
YG NV++ PTQ T QG GQ+P A G Q Y P P P
Sbjct: 473 YG--NVAN------PTQEGHTTSYGAQGETGQAPPSVQPSAIGQQGYNTQQPSPSPASYP 524
Query: 1381 XXXXXXXXXXXPP-------AHPPA----------PLQSQPPISQPVYGQAGYPP----- 1494
PP + PPA P + P + PVYGQ P
Sbjct: 525 PQGSNQPAYGMPPTSQTGFGSQPPAQSGYTTNYGPPQAQKAPANPPVYGQTQQSPSAQGG 584
Query: 1495 --QPAPLQSNNFQGATAYGMTHPQMQAQPPPKTYAAPLPYGAERNGDNSIAPANNVTG 1662
QPAP+Q G H Q QPP ++ A ++R +S A G
Sbjct: 585 YAQPAPVQP---------GYPHSQ---QPPAQSGYAQTDSSSQRAAPSSYGTAAGQPG 630
>ref|NP_001130556.1| uncharacterized protein LOC100191655 [Zea mays]
gi|194689470|gb|ACF78819.1| unknown [Zea mays]
gi|223943199|gb|ACN25683.1| unknown [Zea mays]
gi|413936736|gb|AFW71287.1| hypothetical protein
ZEAMMB73_610626 [Zea mays] gi|413936737|gb|AFW71288.1|
hypothetical protein ZEAMMB73_610626 [Zea mays]
Length = 690
Score = 304 bits (779), Expect = 4e-80
Identities = 232/598 (38%), Positives = 287/598 (47%), Gaps = 78/598 (13%)
Frame = +1
Query: 64 PDSIELVKQKVQAYVSRLVSDAETKRPRXXXXXXXXXXXXXXXXXDAKK----------- 210
PD I+L KQ+ Q +R+ + AE KRPR
Sbjct: 48 PDEIQLAKQRAQEIAARIFNAAEAKRPRVDNGDDDVGGFGGGSSLGGSGGGGGGRIGGAG 107
Query: 211 LTENTQSGPY------PYMTQASSNYAS----QGSSKKIDIPNGKVGVIIGRAGDTIKSL 360
L ++ +G P +Q+S+ S QG+SKKI+IPNG+VGVIIG+AG+TI+ +
Sbjct: 108 LGFSSSAGGGHGASIPPLSSQSSAPQYSYGGHQGTSKKIEIPNGRVGVIIGKAGETIRYI 167
Query: 361 QLQSGARIQVDKDTEVDPYSQIRGVQLFGTPEQISRAEQLIKDVIAESDAGGPGS-SAAR 537
QLQSGA+IQV +D E +P + R V+L G PEQIS+AEQLIK+VIAE+DAG G+ S R
Sbjct: 168 QLQSGAKIQVTRDHEAEPGALTRQVELSGNPEQISKAEQLIKEVIAEADAGSSGAVSGGR 227
Query: 538 GFNSVPEGGEHFILKVPNNKVAMVIGKGGETIKSMQSKSGARIQVIPLRLPPGDTSTERN 717
+N+ G E F +K+ NNKV ++IGKGGETIKSMQ+KSGARIQVIPL LP GDTSTER
Sbjct: 228 KYNAPQPGAETFQMKIANNKVGLIIGKGGETIKSMQAKSGARIQVIPLHLPAGDTSTERT 287
Query: 718 VHIDGTQEQIEFAKQLVNEVISENRVRNPPVGNNQMQQAYYPP---ANW----VPPVQSS 876
VHIDGTQEQIE AKQLV EV SENR RNP G QQ Y+PP +NW PP QS
Sbjct: 288 VHIDGTQEQIEHAKQLVAEVTSENRARNPMSG-GYSQQGYHPPRPQSNWGPPSAPPQQSG 346
Query: 877 XXXXXXXXXXXXXXXXXXXXXXXXXXXXT-----VGWDQS-NSVAGPPQQSTG-NYYGQQ 1035
T GWDQS N + TG +YY QQ
Sbjct: 347 YGYMQPGAYPGAPPQYGAPQQPYGSYPPTSGGYQTGWDQSQNQQSHTTPPGTGYDYYSQQ 406
Query: 1036 NQ---------TGSAAPNVNLSYGQTQS-TSQNYEQGYSHQPQG---------SGQNISG 1158
Q T ++ + +YGQ + SQ Y+ Y+ G SG G
Sbjct: 407 QQPQQQQSAPGTAASTDATSYNYGQPSTYASQGYDSTYTQHSGGQQAYGHDGYSGYQTQG 466
Query: 1159 QVPPYDQQNSYVTSGYGPPNVSSQLDGTIPTQPYA-------------TQPPA---YQGY 1290
Q Y QQ Y GYG S + T Y T PA + GY
Sbjct: 467 QQQGYSQQTGYDQQGYGASAYGSAANSTQDGSSYGGPGGATQASPGQQTSTPAAGSHPGY 526
Query: 1291 YGQSPAIA----PTPAYGPQSYAGPLPPHPXXXXXXXXXXXXXXXPPAH-PPAPLQSQPP 1455
Q P A P P Y P PP P P A+ P+P +PP
Sbjct: 527 ASQPPTSAAASYPVQGSAPSGYGAP-PPQP--GYGTQPPQQGGYGPGAYGQPSPHGEKPP 583
Query: 1456 ISQPVYGQAGYPPQPAPLQSNNFQGATAYGMTHPQMQAQP--PPKTYAAPLPYGAERN 1623
S P YGQA P P Q G YG + P A P P A+ YG +++
Sbjct: 584 ASSP-YGQA---PPPGSAQG----GYVQYGYSQPAYGAPPAYPGAPTASHPGYGQQQS 633