BLASTX nr result

ID: Coptis24_contig00011011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011011
         (833 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279093.2| PREDICTED: uncharacterized protein LOC100242...   253   5e-65
emb|CAN78632.1| hypothetical protein VITISV_000033 [Vitis vinifera]   253   5e-65
ref|XP_002312391.1| predicted protein [Populus trichocarpa] gi|2...   240   2e-61
ref|XP_002529123.1| DNA binding protein, putative [Ricinus commu...   239   4e-61
ref|XP_004167252.1| PREDICTED: uncharacterized protein LOC101229...   234   2e-59

>ref|XP_002279093.2| PREDICTED: uncharacterized protein LOC100242253 [Vitis vinifera]
          Length = 731

 Score =  253 bits (645), Expect = 5e-65
 Identities = 136/240 (56%), Positives = 168/240 (70%), Gaps = 3/240 (1%)
 Frame = +3

Query: 123 TTTWLYVGWEEVIVSNEKGKREVNYYLKRRDGKASDLAVIGKERSIRHMFYHFAHSXXXX 302
           T +  +V WEEV VS+++G+REV+YYLKR+DG +SDLAVIGKE+S+RHM YH+A      
Sbjct: 12  TNSSAFVRWEEVFVSSDRGRREVHYYLKRKDG-SSDLAVIGKEKSLRHMSYHYA------ 64

Query: 303 XXXXXXXXXXXXXXXXXFVAPQN--VKLKSRREXXXXXXXXXXXXXPRGSFQHVGRFFDN 476
                             +AP +  VKL+SRRE                + Q  G   +N
Sbjct: 65  ----------IRNRSLISIAPSSSLVKLRSRREVIDWLNSLVQDLSLPKTPQPTGPSQNN 114

Query: 477 -EGFNATLKDSRIRNLGVQSKAFLWLGSSWTCRKRRKHYRSFCRNGITISVHDFVYVLAE 653
            + +  +LKD +++ LG  +K FLWLGS WTCRKRR HY+SF RNGI ISVHDFVYVLAE
Sbjct: 115 KDAYIDSLKDIQLQRLGHFTKEFLWLGSPWTCRKRRNHYQSFRRNGIKISVHDFVYVLAE 174

Query: 654 ENKRLVAYLEDLYEDSRSNKMVVVRWFHKIDEVGIILPPDYNDREIFFSLCLQDLSVECI 833
           E+KRLVAYLED+YEDSR N+MVVVRWFHKIDEVGI+LP ++NDREIFFSLC QDLS+ECI
Sbjct: 175 EDKRLVAYLEDMYEDSRGNRMVVVRWFHKIDEVGIVLPLNFNDREIFFSLCHQDLSIECI 234


>emb|CAN78632.1| hypothetical protein VITISV_000033 [Vitis vinifera]
          Length = 669

 Score =  253 bits (645), Expect = 5e-65
 Identities = 136/240 (56%), Positives = 168/240 (70%), Gaps = 3/240 (1%)
 Frame = +3

Query: 123 TTTWLYVGWEEVIVSNEKGKREVNYYLKRRDGKASDLAVIGKERSIRHMFYHFAHSXXXX 302
           T +  +V WEEV VS+++G+REV+YYLKR+DG +SDLAVIGKE+S+RHM YH+A      
Sbjct: 12  TNSSAFVRWEEVFVSSDRGRREVHYYLKRKDG-SSDLAVIGKEKSLRHMSYHYA------ 64

Query: 303 XXXXXXXXXXXXXXXXXFVAPQN--VKLKSRREXXXXXXXXXXXXXPRGSFQHVGRFFDN 476
                             +AP +  VKL+SRRE                + Q  G   +N
Sbjct: 65  ----------IRNRSLISIAPSSSLVKLRSRREVIDWLNSLVQDLSLPKTPQPTGPSQNN 114

Query: 477 -EGFNATLKDSRIRNLGVQSKAFLWLGSSWTCRKRRKHYRSFCRNGITISVHDFVYVLAE 653
            + +  +LKD +++ LG  +K FLWLGS WTCRKRR HY+SF RNGI ISVHDFVYVLAE
Sbjct: 115 KDAYIDSLKDIQLQRLGHFTKEFLWLGSPWTCRKRRNHYQSFRRNGIKISVHDFVYVLAE 174

Query: 654 ENKRLVAYLEDLYEDSRSNKMVVVRWFHKIDEVGIILPPDYNDREIFFSLCLQDLSVECI 833
           E+KRLVAYLED+YEDSR N+MVVVRWFHKIDEVGI+LP ++NDREIFFSLC QDLS+ECI
Sbjct: 175 EDKRLVAYLEDMYEDSRGNRMVVVRWFHKIDEVGIVLPLNFNDREIFFSLCHQDLSIECI 234


>ref|XP_002312391.1| predicted protein [Populus trichocarpa] gi|222852211|gb|EEE89758.1|
           predicted protein [Populus trichocarpa]
          Length = 629

 Score =  240 bits (613), Expect = 2e-61
 Identities = 132/240 (55%), Positives = 155/240 (64%), Gaps = 8/240 (3%)
 Frame = +3

Query: 138 YVGWEEVIVSNEKGKREVNYYLKRRDGKASDLAVIGKERSIRHMFYHFAHSXXXXXXXXX 317
           YV WEEV VS++KG+REV YYLK+ DG   DLA+IGKE+S+RHM Y+FA S         
Sbjct: 1   YVSWEEVNVSSDKGRREVKYYLKKNDG-GIDLAIIGKEKSLRHMSYYFAIS--------- 50

Query: 318 XXXXXXXXXXXXFVAPQNVKLKSRRE------XXXXXXXXXXXXXPRGSFQHVG--RFFD 473
                       +     VKLKSRRE                    R  F+      FF 
Sbjct: 51  -------IRSNFYSMTPPVKLKSRREVIDWLNSIVSVQFLFASLAARSLFEPCDFILFFS 103

Query: 474 NEGFNATLKDSRIRNLGVQSKAFLWLGSSWTCRKRRKHYRSFCRNGITISVHDFVYVLAE 653
            +       D++ + LG     FLWLGS WTCRKR+KHY SFCRNG+ ISVHDFVYVLAE
Sbjct: 104 ED-------DNQSQKLGHYYSEFLWLGSPWTCRKRKKHYESFCRNGVKISVHDFVYVLAE 156

Query: 654 ENKRLVAYLEDLYEDSRSNKMVVVRWFHKIDEVGIILPPDYNDREIFFSLCLQDLSVECI 833
           E+KRLVAYLEDLYEDS+ NKMV+VRWFHKIDEVGI+LP ++NDREIFFS CLQDLS+ECI
Sbjct: 157 ESKRLVAYLEDLYEDSKGNKMVMVRWFHKIDEVGIVLPHNFNDREIFFSRCLQDLSIECI 216


>ref|XP_002529123.1| DNA binding protein, putative [Ricinus communis]
           gi|223531402|gb|EEF33236.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 685

 Score =  239 bits (611), Expect = 4e-61
 Identities = 128/236 (54%), Positives = 157/236 (66%), Gaps = 4/236 (1%)
 Frame = +3

Query: 138 YVGWEEVIVSNEKGKREVNYYLKRRDGKASDLAVIGKERSIRHMFYHFAHSXXXXXXXXX 317
           YV WEEV VS++KG+REV+YYLKR+DG   DLAVIGKERS+RHM YH+A +         
Sbjct: 11  YVSWEEVNVSSDKGRREVHYYLKRKDG-GLDLAVIGKERSLRHMSYHYAAAIINNSPSTG 69

Query: 318 XXXXXXXXXXXXFVAPQNVKLKSRREXXXXXXXXXXXXXPRGSFQHVGRFFDNEGFNA-- 491
                              KLKSRRE             P   F H+  + DN   +   
Sbjct: 70  LW-----------------KLKSRREVVDWLNSIVSDSTPLELF-HLSGYLDNIDASELD 111

Query: 492 --TLKDSRIRNLGVQSKAFLWLGSSWTCRKRRKHYRSFCRNGITISVHDFVYVLAEENKR 665
               K +++R LG  +K F WLG SWTCR+RRKHY+SF RNG+ ISV+DFV+VLAEE+K+
Sbjct: 112 IDNFKGTQLRKLGQYTKEFSWLGPSWTCRRRRKHYQSFSRNGVEISVYDFVFVLAEEDKQ 171

Query: 666 LVAYLEDLYEDSRSNKMVVVRWFHKIDEVGIILPPDYNDREIFFSLCLQDLSVECI 833
           LVA+LED+YED++ NKMVVVRW+HKIDEVGI LP  +NDREIF SLCLQDLS+ECI
Sbjct: 172 LVAHLEDMYEDTKGNKMVVVRWYHKIDEVGIALPRTFNDREIFSSLCLQDLSIECI 227


>ref|XP_004167252.1| PREDICTED: uncharacterized protein LOC101229627 [Cucumis sativus]
          Length = 692

 Score =  234 bits (596), Expect = 2e-59
 Identities = 127/238 (53%), Positives = 155/238 (65%), Gaps = 6/238 (2%)
 Frame = +3

Query: 138 YVGWEEVIVSNEKGKREVNYYLKRRDGKASDLAVIGKERSIRHMFYHFAHSXXXXXXXXX 317
           +V W EV VS+++G+REV+YYLK  DG ASDLAV+GKE+S+RHM YH+A           
Sbjct: 26  FVSWYEVFVSSDRGRREVHYYLKSGDG-ASDLAVVGKEKSLRHMSYHYALQNRFLNSLGL 84

Query: 318 XXXXXXXXXXXXFVAPQNVKLKSRREXXXXXXXXXXXXXPRGSFQHVGRFFDNEGFNA-- 491
                              KLKSRRE              + S Q   R  D EG +A  
Sbjct: 85  FTSL--------------TKLKSRREVVEWLSSVVSDSQRKTS-QPSDRMMDIEGEDACP 129

Query: 492 ----TLKDSRIRNLGVQSKAFLWLGSSWTCRKRRKHYRSFCRNGITISVHDFVYVLAEEN 659
               + KD +   LG  ++ F W+G  WTC+++R+HY SF RNG+ ISVHDFVYVLAEE 
Sbjct: 130 SNSGSKKDVQYIKLGQYTRDFSWVGCPWTCKRKRRHYPSFSRNGVKISVHDFVYVLAEEG 189

Query: 660 KRLVAYLEDLYEDSRSNKMVVVRWFHKIDEVGIILPPDYNDREIFFSLCLQDLSVECI 833
           KRLVAYLED+YEDSRSN+MVVVRWFHKIDEV I+LP ++NDREIFFSLCLQDLS+ECI
Sbjct: 190 KRLVAYLEDMYEDSRSNRMVVVRWFHKIDEVDIVLPRNFNDREIFFSLCLQDLSIECI 247


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