BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010998
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152102.1| PREDICTED: eukaryotic translation initiation...    78   2e-20
gb|ABK92468.1| unknown [Populus trichocarpa]                           72   2e-19
ref|XP_002320437.1| predicted protein [Populus trichocarpa] gi|2...    72   2e-19
ref|XP_002266909.1| PREDICTED: eukaryotic translation initiation...    70   3e-19
ref|XP_002301647.1| predicted protein [Populus trichocarpa] gi|2...    73   1e-18

>ref|XP_004152102.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           H-like [Cucumis sativus]
           gi|449521699|ref|XP_004167867.1| PREDICTED: eukaryotic
           translation initiation factor 3 subunit H-like [Cucumis
           sativus]
          Length = 337

 Score = 77.8 bits (190), Expect(2) = 2e-20
 Identities = 37/43 (86%), Positives = 41/43 (95%), Gaps = 2/43 (4%)
 Frame = -2

Query: 407 RAKNMT--AAGQEPLPEEDPTNPIFKPVPEPSRLDSYLITNQM 285
           RA+NMT  AAG+EPLPEEDPTNPIFKP+PEPSRLDSYLITNQ+
Sbjct: 268 RAENMTRKAAGEEPLPEEDPTNPIFKPLPEPSRLDSYLITNQI 310



 Score = 46.6 bits (109), Expect(2) = 2e-20
 Identities = 22/30 (73%), Positives = 25/30 (83%)
 Frame = -1

Query: 582 LSMEQQKFQFYYRNLSRXXXXXQSWLQKRR 493
           LS+EQQKFQFYYR+L+R     QSWLQKRR
Sbjct: 239 LSVEQQKFQFYYRSLTRQQAQQQSWLQKRR 268


>gb|ABK92468.1| unknown [Populus trichocarpa]
          Length = 341

 Score = 72.0 bits (175), Expect(2) = 2e-19
 Identities = 33/43 (76%), Positives = 40/43 (93%), Gaps = 2/43 (4%)
 Frame = -2

Query: 407 RAKNMT--AAGQEPLPEEDPTNPIFKPVPEPSRLDSYLITNQM 285
           R++NM+  AAG+EPLPEEDP NPIFKP+PEPSRLDS+LITNQ+
Sbjct: 272 RSENMSRKAAGEEPLPEEDPLNPIFKPIPEPSRLDSFLITNQI 314



 Score = 48.9 bits (115), Expect(2) = 2e-19
 Identities = 23/30 (76%), Positives = 25/30 (83%)
 Frame = -1

Query: 582 LSMEQQKFQFYYRNLSRXXXXXQSWLQKRR 493
           LSMEQQKFQ+YYRNLSR     Q+WLQKRR
Sbjct: 243 LSMEQQKFQYYYRNLSRQQAQQQAWLQKRR 272


>ref|XP_002320437.1| predicted protein [Populus trichocarpa] gi|222861210|gb|EEE98752.1|
           predicted protein [Populus trichocarpa]
          Length = 333

 Score = 72.0 bits (175), Expect(2) = 2e-19
 Identities = 33/43 (76%), Positives = 40/43 (93%), Gaps = 2/43 (4%)
 Frame = -2

Query: 407 RAKNMT--AAGQEPLPEEDPTNPIFKPVPEPSRLDSYLITNQM 285
           R++NM+  AAG+EPLPEEDP NPIFKP+PEPSRLDS+LITNQ+
Sbjct: 264 RSENMSRKAAGEEPLPEEDPLNPIFKPIPEPSRLDSFLITNQI 306



 Score = 48.9 bits (115), Expect(2) = 2e-19
 Identities = 23/30 (76%), Positives = 25/30 (83%)
 Frame = -1

Query: 582 LSMEQQKFQFYYRNLSRXXXXXQSWLQKRR 493
           LSMEQQKFQ+YYRNLSR     Q+WLQKRR
Sbjct: 235 LSMEQQKFQYYYRNLSRQQAQQQAWLQKRR 264


>ref|XP_002266909.1| PREDICTED: eukaryotic translation initiation factor 3 subunit H
           [Vitis vinifera] gi|296089621|emb|CBI39440.3| unnamed
           protein product [Vitis vinifera]
          Length = 337

 Score = 70.5 bits (171), Expect(2) = 3e-19
 Identities = 32/43 (74%), Positives = 38/43 (88%), Gaps = 2/43 (4%)
 Frame = -2

Query: 407 RAKNMT--AAGQEPLPEEDPTNPIFKPVPEPSRLDSYLITNQM 285
           RA+NM    AG++PLPEEDP NPIFKP+PEPSRLDS+LITNQ+
Sbjct: 268 RAENMARKTAGEDPLPEEDPANPIFKPIPEPSRLDSFLITNQI 310



 Score = 50.1 bits (118), Expect(2) = 3e-19
 Identities = 24/30 (80%), Positives = 25/30 (83%)
 Frame = -1

Query: 582 LSMEQQKFQFYYRNLSRXXXXXQSWLQKRR 493
           LSMEQQKFQFYYRNLSR     Q+WLQKRR
Sbjct: 239 LSMEQQKFQFYYRNLSRQQGQQQAWLQKRR 268


>ref|XP_002301647.1| predicted protein [Populus trichocarpa] gi|222843373|gb|EEE80920.1|
           predicted protein [Populus trichocarpa]
          Length = 340

 Score = 73.2 bits (178), Expect(2) = 1e-18
 Identities = 34/43 (79%), Positives = 40/43 (93%), Gaps = 2/43 (4%)
 Frame = -2

Query: 407 RAKNMT--AAGQEPLPEEDPTNPIFKPVPEPSRLDSYLITNQM 285
           R++NMT  AAG+EPLPEEDP+NPIFKP+PEPSRL S+LITNQM
Sbjct: 271 RSENMTRKAAGEEPLPEEDPSNPIFKPIPEPSRLGSFLITNQM 313



 Score = 45.4 bits (106), Expect(2) = 1e-18
 Identities = 21/30 (70%), Positives = 25/30 (83%)
 Frame = -1

Query: 582 LSMEQQKFQFYYRNLSRXXXXXQSWLQKRR 493
           LS+EQQKFQ++YRNLSR     Q+WLQKRR
Sbjct: 242 LSVEQQKFQYHYRNLSRQQAQQQAWLQKRR 271