BLASTX nr result

ID: Coptis24_contig00010958 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010958
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236665.1| uncharacterized protein LOC100500603 precurs...    72   1e-10
ref|XP_003627749.1| hypothetical protein MTR_8g037800 [Medicago ...    70   2e-10
ref|XP_002313779.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10
emb|CAN82852.1| hypothetical protein VITISV_041720 [Vitis vinifera]    65   7e-09
ref|XP_002283641.1| PREDICTED: uncharacterized protein LOC100245...    62   6e-08

>ref|NP_001236665.1| uncharacterized protein LOC100500603 precursor [Glycine max]
           gi|255630736|gb|ACU15729.1| unknown [Glycine max]
          Length = 93

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 40/94 (42%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
 Frame = -2

Query: 534 MGTHMLVMKITAXXXXXXXXXXXS-YAGRQWSGYIEMASVEMSAAQQEAASKYLRHDKAS 358
           MGT ML+ K T            + +AGR  S  I+  + +++A ++    K L  ++  
Sbjct: 1   MGTLMLLKKFTLLFLLISGPLLSTSFAGRVRSNSIKNFAKDVNAIEEGTPRKPLNKEEVR 60

Query: 357 DNVHERVLRVNTKDYGTYDPTPTLNKPPFKLIPN 256
             +HER+LR NTKDYG YDP+P+L+KPPFKLIPN
Sbjct: 61  -TIHERLLRANTKDYGRYDPSPSLSKPPFKLIPN 93


>ref|XP_003627749.1| hypothetical protein MTR_8g037800 [Medicago truncatula]
           gi|355521771|gb|AET02225.1| hypothetical protein
           MTR_8g037800 [Medicago truncatula]
           gi|388492214|gb|AFK34173.1| unknown [Medicago
           truncatula]
          Length = 91

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 33/69 (47%), Positives = 50/69 (72%)
 Frame = -2

Query: 462 YAGRQWSGYIEMASVEMSAAQQEAASKYLRHDKASDNVHERVLRVNTKDYGTYDPTPTLN 283
           +AGR  S +I +++ +++A   E  +K   +++   ++HER+LR NTKDYG YDP+PT +
Sbjct: 25  FAGRA-SNFIRISNEDVNAVH-EVTTKMAMNEEEVRSIHERLLRANTKDYGRYDPSPTFS 82

Query: 282 KPPFKLIPN 256
           KPPFKLIPN
Sbjct: 83  KPPFKLIPN 91


>ref|XP_002313779.1| predicted protein [Populus trichocarpa] gi|222850187|gb|EEE87734.1|
           predicted protein [Populus trichocarpa]
          Length = 94

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 34/70 (48%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
 Frame = -2

Query: 462 YAGRQWSGYIEMAS-VEMSAAQQEAASKYLRHDKASDNVHERVLRVNTKDYGTYDPTPTL 286
           +AGR+     ++A  VE+SAA  E  S    H+  +  +HER+L+ NTKDYG Y P P L
Sbjct: 25  FAGRRSKSVNKLAEEVEVSAATYEEISSKPSHNNEATTIHERLLKANTKDYGNYKPAPAL 84

Query: 285 NKPPFKLIPN 256
            +PPFKLIPN
Sbjct: 85  VRPPFKLIPN 94


>emb|CAN82852.1| hypothetical protein VITISV_041720 [Vitis vinifera]
          Length = 249

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 28/51 (54%), Positives = 36/51 (70%)
 Frame = -2

Query: 408 AAQQEAASKYLRHDKASDNVHERVLRVNTKDYGTYDPTPTLNKPPFKLIPN 256
           A  +E + K   H + ++ +HER+LR NT+DYG YDP P L KPPFKLIPN
Sbjct: 199 AVFKEISRKPSHHYRRAEAIHERLLRANTRDYGNYDPAPALGKPPFKLIPN 249


>ref|XP_002283641.1| PREDICTED: uncharacterized protein LOC100245294 [Vitis vinifera]
           gi|297744426|emb|CBI37688.3| unnamed protein product
           [Vitis vinifera]
          Length = 95

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 27/51 (52%), Positives = 35/51 (68%)
 Frame = -2

Query: 408 AAQQEAASKYLRHDKASDNVHERVLRVNTKDYGTYDPTPTLNKPPFKLIPN 256
           A  +E + K     + ++ +HER+LR NT+DYG YDP P L KPPFKLIPN
Sbjct: 45  AVFKEISRKPSHQYRRAEAIHERLLRANTRDYGNYDPAPALGKPPFKLIPN 95


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