BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010944
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278458.2| PREDICTED: small RNA degrading nuclease 3-li...    65   4e-09
emb|CBI33775.3| unnamed protein product [Vitis vinifera]               65   4e-09
ref|XP_002265287.1| PREDICTED: ribosomal RNA large subunit methy...    63   3e-08
gb|AFK41173.1| unknown [Lotus japonicus]                               62   5e-08
ref|XP_002527517.1| catalytic, putative [Ricinus communis] gi|22...    62   5e-08

>ref|XP_002278458.2| PREDICTED: small RNA degrading nuclease 3-like [Vitis vinifera]
          Length = 389

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 29/47 (61%), Positives = 40/47 (85%)
 Frame = +1

Query: 142 KDFLTVHDTKMGTSMSDPVKRSVDELVAFLRTFAKEEDLKFFATMVR 282
           KDFL+ +D K+G S+SDP +R VD LV+FL+TF+KEEDLKFFA +++
Sbjct: 33  KDFLSTYDRKLGPSLSDPSRRPVDTLVSFLKTFSKEEDLKFFAKILQ 79


>emb|CBI33775.3| unnamed protein product [Vitis vinifera]
          Length = 360

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 29/47 (61%), Positives = 40/47 (85%)
 Frame = +1

Query: 142 KDFLTVHDTKMGTSMSDPVKRSVDELVAFLRTFAKEEDLKFFATMVR 282
           KDFL+ +D K+G S+SDP +R VD LV+FL+TF+KEEDLKFFA +++
Sbjct: 33  KDFLSTYDRKLGPSLSDPSRRPVDTLVSFLKTFSKEEDLKFFAKILQ 79


>ref|XP_002265287.1| PREDICTED: ribosomal RNA large subunit methyltransferase N [Vitis
           vinifera] gi|147817733|emb|CAN60150.1| hypothetical
           protein VITISV_044331 [Vitis vinifera]
           gi|296083052|emb|CBI22456.3| unnamed protein product
           [Vitis vinifera]
          Length = 372

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/34 (85%), Positives = 32/34 (94%)
 Frame = +1

Query: 1   TGSMGFKNNLTSGEIVEQLVHASHLCQIRNIVFM 102
           TGSMGFK+NL+SGEIVEQLVHASH  QIRN+VFM
Sbjct: 134 TGSMGFKSNLSSGEIVEQLVHASHFSQIRNVVFM 167


>gb|AFK41173.1| unknown [Lotus japonicus]
          Length = 525

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/47 (59%), Positives = 37/47 (78%)
 Frame = +1

Query: 142 KDFLTVHDTKMGTSMSDPVKRSVDELVAFLRTFAKEEDLKFFATMVR 282
           K+FL  +D K G SMSDP KR+ + L AFL+TF+KE+DLKFFA ++R
Sbjct: 36  KEFLNSYDKKFGASMSDPAKRTHEVLAAFLKTFSKEDDLKFFANIMR 82


>ref|XP_002527517.1| catalytic, putative [Ricinus communis] gi|223533157|gb|EEF34915.1|
           catalytic, putative [Ricinus communis]
          Length = 337

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/34 (85%), Positives = 32/34 (94%)
 Frame = +1

Query: 1   TGSMGFKNNLTSGEIVEQLVHASHLCQIRNIVFM 102
           TGSMGFKNNL+SGEIVEQLVHA+ L QIRN+VFM
Sbjct: 176 TGSMGFKNNLSSGEIVEQLVHATQLSQIRNVVFM 209