BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010920
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70994.1| hypothetical protein VITISV_038698 [Vitis vinifera]   146   2e-33
ref|XP_002326871.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28
ref|XP_002271824.1| PREDICTED: pentatricopeptide repeat-containi...   111   7e-23
gb|ABE65907.1| pentatricopeptide repeat-containing protein [Arab...   104   9e-21
ref|NP_182015.1| Pentatricopeptide repeat-containing protein [Ar...   104   9e-21

>emb|CAN70994.1| hypothetical protein VITISV_038698 [Vitis vinifera]
          Length = 751

 Score =  146 bits (368), Expect = 2e-33
 Identities = 70/129 (54%), Positives = 91/129 (70%), Gaps = 4/129 (3%)
 Frame = +3

Query: 6   WSSIERKCLSLLQKPNTKNTIPQIHSFILRNGIENNVNIFTKFISACCSV----PTTCSF 173
           WS IERKCLSLLQ+  T+  + QIH+F+LRN +E N N+FTKFI+ C S+    P     
Sbjct: 148 WSPIERKCLSLLQQSKTRANLLQIHAFMLRNALETNPNLFTKFIATCSSIALLAPLYDPL 207

Query: 174 SGVRYARRVFDQRTERGDSYLCNSMIKGYVDVYLFKESMTLYRDLKRGTCFSPDNFTFPS 353
           +G+ +ARR+FD R  R D++LCNSMIK YV +  + ES  LYRDL+R T F+PD+FTF  
Sbjct: 208 AGIVHARRMFDHRPHRDDAFLCNSMIKAYVGMRQYSESFALYRDLRRNTSFTPDSFTFSV 267

Query: 354 LLKSCGLNL 380
           L KSC LN+
Sbjct: 268 LAKSCALNM 276


>ref|XP_002326871.1| predicted protein [Populus trichocarpa] gi|222835186|gb|EEE73621.1|
           predicted protein [Populus trichocarpa]
          Length = 581

 Score =  129 bits (324), Expect = 2e-28
 Identities = 63/122 (51%), Positives = 85/122 (69%)
 Frame = +3

Query: 15  IERKCLSLLQKPNTKNTIPQIHSFILRNGIENNVNIFTKFISACCSVPTTCSFSGVRYAR 194
           +ER+CL LLQ+  T+ T+ QIH+ ILRN I+ NVNI TKFI+ C  + +T      R+AR
Sbjct: 1   MERECLFLLQRCRTRKTLLQIHALILRNAIDANVNILTKFITTCGQLSST------RHAR 54

Query: 195 RVFDQRTERGDSYLCNSMIKGYVDVYLFKESMTLYRDLKRGTCFSPDNFTFPSLLKSCGL 374
            +FD R+ RGD++LCNSMIK +V +    ++ TLY+DL+R TCF PDNFTF  L K C L
Sbjct: 55  HLFDNRSHRGDTFLCNSMIKSHVVMRQLADAFTLYKDLRRETCFVPDNFTFTVLAKCCAL 114

Query: 375 NL 380
            +
Sbjct: 115 RM 116


>ref|XP_002271824.1| PREDICTED: pentatricopeptide repeat-containing protein At2g44880
           [Vitis vinifera] gi|297734603|emb|CBI16654.3| unnamed
           protein product [Vitis vinifera]
          Length = 577

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/102 (51%), Positives = 70/102 (68%), Gaps = 4/102 (3%)
 Frame = +3

Query: 87  ILRNGIENNVNIFTKFISACCSV----PTTCSFSGVRYARRVFDQRTERGDSYLCNSMIK 254
           +LRN +E N N+FTKFI+ C S+    P     +G+ +ARR+FD R  R D++LCNSMIK
Sbjct: 1   MLRNALETNPNLFTKFIATCSSIALLAPLYDPLAGIVHARRMFDHRPHRDDAFLCNSMIK 60

Query: 255 GYVDVYLFKESMTLYRDLKRGTCFSPDNFTFPSLLKSCGLNL 380
            YV +  + ES  LYRDL+R T F+PD+FTF  L KSC LN+
Sbjct: 61  AYVGMRQYSESFALYRDLRRNTSFTPDSFTFSVLAKSCALNM 102


>gb|ABE65907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 555

 Score =  104 bits (259), Expect = 9e-21
 Identities = 50/98 (51%), Positives = 68/98 (69%)
 Frame = +3

Query: 87  ILRNGIENNVNIFTKFISACCSVPTTCSFSGVRYARRVFDQRTERGDSYLCNSMIKGYVD 266
           +LR+ IE NV IFTKF+    S        G+ YAR++FDQR +R DS+L NSMIK Y++
Sbjct: 1   MLRHAIETNVQIFTKFLVISASAV------GIGYARKLFDQRPQRDDSFLSNSMIKAYLE 54

Query: 267 VYLFKESMTLYRDLKRGTCFSPDNFTFPSLLKSCGLNL 380
              + +S  LYRDL++ TCF+PDNFTF +L KSC L++
Sbjct: 55  TRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSM 92


>ref|NP_182015.1| Pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218546766|sp|Q1PEU4.2|PP201_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g44880 gi|2344896|gb|AAC31836.1| hypothetical protein
           [Arabidopsis thaliana] gi|330255385|gb|AEC10479.1|
           Pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 555

 Score =  104 bits (259), Expect = 9e-21
 Identities = 50/98 (51%), Positives = 68/98 (69%)
 Frame = +3

Query: 87  ILRNGIENNVNIFTKFISACCSVPTTCSFSGVRYARRVFDQRTERGDSYLCNSMIKGYVD 266
           +LR+ IE NV IFTKF+    S        G+ YAR++FDQR +R DS+L NSMIK Y++
Sbjct: 1   MLRHAIETNVQIFTKFLVISASAV------GIGYARKLFDQRPQRDDSFLSNSMIKAYLE 54

Query: 267 VYLFKESMTLYRDLKRGTCFSPDNFTFPSLLKSCGLNL 380
              + +S  LYRDL++ TCF+PDNFTF +L KSC L++
Sbjct: 55  TRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSM 92