BLASTX nr result

ID: Coptis24_contig00010883 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010883
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319590.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
gb|ABK93956.1| unknown [Populus trichocarpa]                           73   2e-11
gb|ABK96338.1| unknown [Populus trichocarpa x Populus deltoides]       71   8e-11
ref|XP_002328387.1| predicted protein [Populus trichocarpa] gi|1...    71   8e-11
gb|ADV16367.1| acyl carrier protein 3 [Helianthus annuus]              70   1e-10

>ref|XP_002319590.1| predicted protein [Populus trichocarpa] gi|222857966|gb|EEE95513.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 42/80 (52%), Positives = 56/80 (70%)
 Frame = +1

Query: 73  TVNLVLKVLSRVLRFTQSLS*S*RCEVHTVTSVSLSNKMEVEIVMGLEEAFGISVEEESA 252
           T++ V +++ + L  +  +  +   +  T+ + SL     VEIVMGLEEAFGISVEEESA
Sbjct: 61  TIDKVCEIVKKQLALSDEIPVTGESKFTTLGADSLDT---VEIVMGLEEAFGISVEEESA 117

Query: 253 QSIATAQDAADLIEKIIETK 312
           QSIAT QDAADLIEK++E K
Sbjct: 118 QSIATVQDAADLIEKLVEKK 137


>gb|ABK93956.1| unknown [Populus trichocarpa]
          Length = 137

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 42/80 (52%), Positives = 56/80 (70%)
 Frame = +1

Query: 73  TVNLVLKVLSRVLRFTQSLS*S*RCEVHTVTSVSLSNKMEVEIVMGLEEAFGISVEEESA 252
           T++ V +++ + L  +  +  +   +  T+ + SL     VEIVMGLEEAFGISVEEESA
Sbjct: 60  TIDKVCEIVKKQLALSDEIPVTGESKFTTLGADSLDT---VEIVMGLEEAFGISVEEESA 116

Query: 253 QSIATAQDAADLIEKIIETK 312
           QSIAT QDAADLIEK++E K
Sbjct: 117 QSIATVQDAADLIEKLVEKK 136


>gb|ABK96338.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 137

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 37/50 (74%), Positives = 42/50 (84%)
 Frame = +1

Query: 163 TSVSLSNKMEVEIVMGLEEAFGISVEEESAQSIATAQDAADLIEKIIETK 312
           T++   +   VEIVMGLEEAFGISVEEESAQSIAT QDAADLIEK++E K
Sbjct: 87  TALGADSLDTVEIVMGLEEAFGISVEEESAQSIATVQDAADLIEKLVEKK 136


>ref|XP_002328387.1| predicted protein [Populus trichocarpa] gi|118481393|gb|ABK92639.1|
           unknown [Populus trichocarpa]
           gi|118483648|gb|ABK93718.1| unknown [Populus
           trichocarpa] gi|222838102|gb|EEE76467.1| predicted
           protein [Populus trichocarpa]
          Length = 137

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 37/50 (74%), Positives = 42/50 (84%)
 Frame = +1

Query: 163 TSVSLSNKMEVEIVMGLEEAFGISVEEESAQSIATAQDAADLIEKIIETK 312
           T++   +   VEIVMGLEEAFGISVEEESAQSIAT QDAADLIEK++E K
Sbjct: 87  TALGADSLDTVEIVMGLEEAFGISVEEESAQSIATVQDAADLIEKLVEKK 136


>gb|ADV16367.1| acyl carrier protein 3 [Helianthus annuus]
          Length = 139

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 44/89 (49%), Positives = 56/89 (62%), Gaps = 5/89 (5%)
 Frame = +1

Query: 61  RIC-----STVNLVLKVLSRVLRFTQSLS*S*RCEVHTVTSVSLSNKMEVEIVMGLEEAF 225
           R+C      TVN V  ++ + L   +  + +   +  T+ + SL     VEIVMGLEE F
Sbjct: 54  RVCCAATPETVNKVCNIVRKQLAVPEDTAVTGESKFATLGADSLDT---VEIVMGLEEEF 110

Query: 226 GISVEEESAQSIATAQDAADLIEKIIETK 312
           GISVEEESAQSIAT QDAADLIEK++  K
Sbjct: 111 GISVEEESAQSIATVQDAADLIEKLVSKK 139