BLASTX nr result

ID: Coptis24_contig00010840 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010840
         (891 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517045.1| ADP-ribosylation factor, putative [Ricinus c...   355   8e-96
ref|XP_002283837.1| PREDICTED: ADP-ribosylation factor-like prot...   355   1e-95
gb|ABY60452.1| ADP ribosylation factor-like protein [Adonis aest...   354   1e-95
ref|XP_002322463.1| predicted protein [Populus trichocarpa] gi|1...   353   4e-95
ref|XP_002318229.1| predicted protein [Populus trichocarpa] gi|2...   349   6e-94

>ref|XP_002517045.1| ADP-ribosylation factor, putative [Ricinus communis]
           gi|223543680|gb|EEF45208.1| ADP-ribosylation factor,
           putative [Ricinus communis]
          Length = 183

 Score =  355 bits (911), Expect = 8e-96
 Identities = 170/183 (92%), Positives = 177/183 (96%)
 Frame = -1

Query: 825 MGAFMSKFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 646
           MG F+S+FWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN
Sbjct: 1   MGGFISRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60

Query: 645 IRFEVWDLGGQDRLRTSWATYYRGTHAVIAVIDSTDRARISIMKDELFRLLQHEDLEHSV 466
           IRFEVWDLGGQDRLRTSWATYYRGTHAVIAVIDSTDRARISIMKDELFRLL HEDL+HSV
Sbjct: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIAVIDSTDRARISIMKDELFRLLGHEDLQHSV 120

Query: 465 VLIYANKQDLKDAMPPAEITDALSLHSIKNHDWHIQACCALTGDGLYDGLGWIAQRVSGK 286
           +L+ ANKQDLKDAM PAEITDALSLHSIKNHDWHIQACCALTG+GLYDGLGWIAQRV+GK
Sbjct: 121 ILVLANKQDLKDAMTPAEITDALSLHSIKNHDWHIQACCALTGEGLYDGLGWIAQRVTGK 180

Query: 285 TTS 277
             S
Sbjct: 181 APS 183


>ref|XP_002283837.1| PREDICTED: ADP-ribosylation factor-like protein 5 [Vitis vinifera]
           gi|297737135|emb|CBI26336.3| unnamed protein product
           [Vitis vinifera]
          Length = 183

 Score =  355 bits (910), Expect = 1e-95
 Identities = 168/183 (91%), Positives = 179/183 (97%)
 Frame = -1

Query: 825 MGAFMSKFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 646
           MGAF+SKFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN
Sbjct: 1   MGAFVSKFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60

Query: 645 IRFEVWDLGGQDRLRTSWATYYRGTHAVIAVIDSTDRARISIMKDELFRLLQHEDLEHSV 466
           IRFEVWDLGGQ+RLRTSWATYYRGTHAVI VIDSTDRARI+IMKDELFRLLQH+DL++SV
Sbjct: 61  IRFEVWDLGGQERLRTSWATYYRGTHAVIVVIDSTDRARITIMKDELFRLLQHDDLQNSV 120

Query: 465 VLIYANKQDLKDAMPPAEITDALSLHSIKNHDWHIQACCALTGDGLYDGLGWIAQRVSGK 286
           +L++ANKQD+KDAM PAEITDALSLHSIKNHDWHIQACCALTGDGLYDGLGWIAQRV+GK
Sbjct: 121 ILVFANKQDIKDAMTPAEITDALSLHSIKNHDWHIQACCALTGDGLYDGLGWIAQRVTGK 180

Query: 285 TTS 277
             S
Sbjct: 181 APS 183


>gb|ABY60452.1| ADP ribosylation factor-like protein [Adonis aestivalis var.
           palaestina]
          Length = 184

 Score =  354 bits (909), Expect = 1e-95
 Identities = 171/184 (92%), Positives = 178/184 (96%), Gaps = 1/184 (0%)
 Frame = -1

Query: 825 MGAFMSKFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 646
           MG FMSKFWFMLFPAKEYKI VVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN
Sbjct: 1   MGVFMSKFWFMLFPAKEYKICVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60

Query: 645 IRFEVWDLGGQDRLRTSWATYYRGTHAVIAVIDSTDRARISIMKDELFRLLQHEDLEHSV 466
           IRFEVWDLGGQ+RLRTSWATYYRGTHAVI VIDSTDRARISIMKDEL RLLQHEDLEH+V
Sbjct: 61  IRFEVWDLGGQERLRTSWATYYRGTHAVIVVIDSTDRARISIMKDELLRLLQHEDLEHAV 120

Query: 465 VLIYANKQDLKDAMPPAEITDALSLHSIKNHDWHIQACCALTGDGLYDGLGWIAQRV-SG 289
           VL++ANKQDLKDAMPPAEITDALSLHSIKNHDWHIQ+CCALTGDGL+DGLGWIAQRV +G
Sbjct: 121 VLVFANKQDLKDAMPPAEITDALSLHSIKNHDWHIQSCCALTGDGLHDGLGWIAQRVTTG 180

Query: 288 KTTS 277
           K TS
Sbjct: 181 KATS 184


>ref|XP_002322463.1| predicted protein [Populus trichocarpa] gi|118487070|gb|ABK95365.1|
           unknown [Populus trichocarpa]
           gi|222869459|gb|EEF06590.1| predicted protein [Populus
           trichocarpa]
          Length = 183

 Score =  353 bits (905), Expect = 4e-95
 Identities = 168/183 (91%), Positives = 177/183 (96%)
 Frame = -1

Query: 825 MGAFMSKFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 646
           MGAF S+FWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN
Sbjct: 1   MGAFASRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60

Query: 645 IRFEVWDLGGQDRLRTSWATYYRGTHAVIAVIDSTDRARISIMKDELFRLLQHEDLEHSV 466
           IRFEVWDLGGQDRLRTSWATYYRGTHAVIAVIDSTDR RISIMKDE+FRLL H+DL+HSV
Sbjct: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIAVIDSTDRDRISIMKDEIFRLLGHDDLQHSV 120

Query: 465 VLIYANKQDLKDAMPPAEITDALSLHSIKNHDWHIQACCALTGDGLYDGLGWIAQRVSGK 286
           +L++ANKQDLKDAM PAEITDALSLHSIKNHDWHIQACCALTGDGL+DGLGWIAQRV+GK
Sbjct: 121 ILVFANKQDLKDAMTPAEITDALSLHSIKNHDWHIQACCALTGDGLHDGLGWIAQRVTGK 180

Query: 285 TTS 277
             S
Sbjct: 181 APS 183


>ref|XP_002318229.1| predicted protein [Populus trichocarpa] gi|222858902|gb|EEE96449.1|
           predicted protein [Populus trichocarpa]
          Length = 183

 Score =  349 bits (895), Expect = 6e-94
 Identities = 167/183 (91%), Positives = 174/183 (95%)
 Frame = -1

Query: 825 MGAFMSKFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 646
           MGAF+S+FWFMLFPA EYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN
Sbjct: 1   MGAFVSRFWFMLFPANEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60

Query: 645 IRFEVWDLGGQDRLRTSWATYYRGTHAVIAVIDSTDRARISIMKDELFRLLQHEDLEHSV 466
           IRFEVWDLGGQDRLRTSWATYYRGTHAVI VIDSTDR RISIMKDELF LL H+DL+HSV
Sbjct: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRDRISIMKDELFMLLGHDDLQHSV 120

Query: 465 VLIYANKQDLKDAMPPAEITDALSLHSIKNHDWHIQACCALTGDGLYDGLGWIAQRVSGK 286
           VL++ANKQDLKDAM PAEI DALSLHSIKNHDWHIQACCALTGDGLYDGLGWIAQRV+GK
Sbjct: 121 VLVFANKQDLKDAMTPAEIADALSLHSIKNHDWHIQACCALTGDGLYDGLGWIAQRVTGK 180

Query: 285 TTS 277
             S
Sbjct: 181 APS 183


Top