BLASTX nr result

ID: Coptis24_contig00010836 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010836
         (615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003615790.1| Nbs-lrr resistance protein [Medicago truncat...    95   1e-17
ref|XP_003615721.1| NBS-LRR resistance protein [Medicago truncat...    90   4e-16
ref|XP_003634908.1| PREDICTED: putative disease resistance prote...    87   2e-15
ref|XP_002269571.2| PREDICTED: putative disease resistance prote...    87   2e-15
emb|CBI28621.3| unnamed protein product [Vitis vinifera]               87   2e-15

>ref|XP_003615790.1| Nbs-lrr resistance protein [Medicago truncatula]
            gi|355517125|gb|AES98748.1| Nbs-lrr resistance protein
            [Medicago truncatula]
          Length = 992

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 75/203 (36%), Positives = 107/203 (52%), Gaps = 7/203 (3%)
 Frame = +2

Query: 8    LQPHDNLEELAIEWYPGLHFPDWIARLSNLVNLKLSYCKNLRVLPDLSKLKSLETLYLWD 187
            LQPH NL+ L I +Y GL  P WI  LSNL++L+L  C  +  LP L KL SL+ L L+ 
Sbjct: 731  LQPHSNLKCLTINYYEGLSLPSWIIILSNLISLELEICNKIVRLPLLGKLPSLKKLRLYG 790

Query: 188  LDNLEECEEIVPSNNQGEGDIQLPCLREVIIRNCPK----LKVVPHYMFSHTLKNLEMND 355
            ++NL+  ++    +  G      P L E+ +++ P     LKV    MF   L  L++ D
Sbjct: 791  MNNLKYLDD--DESEYGMEVSVFPSLEELNLKSLPNIEGLLKVERGEMFP-CLSKLDIWD 847

Query: 356  CPELGEVQPCLPPLLEYLHLESDVGVFSKSLPLVGKCSHNSSYPNLNRLIWSSPH--SSL 529
            CPELG   PCLP  L+ LHL        +S+         S++  L +L  +S    +SL
Sbjct: 848  CPELG--LPCLPS-LKSLHLWECNNELLRSI---------STFRGLTQLTLNSGEGITSL 895

Query: 530  PKG-FNRLTSIQSLGLYRCETLD 595
            P+  F  LTS+QSL +  C  L+
Sbjct: 896  PEEMFKNLTSLQSLCINCCNELE 918


>ref|XP_003615721.1| NBS-LRR resistance protein [Medicago truncatula]
            gi|355517056|gb|AES98679.1| NBS-LRR resistance protein
            [Medicago truncatula]
          Length = 988

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 68/205 (33%), Positives = 105/205 (51%), Gaps = 7/205 (3%)
 Frame = +2

Query: 2    KNLQPHDNLEELAIEWYPGLHFPDWIARLSNLVNLKLSYCKNLRVLPDLSKLKSLETLYL 181
            + LQPH NL  L + +Y GL  P WI+ LSNL++L L  C  + +L  L KL SL+ L +
Sbjct: 727  EELQPHSNLNSLTVNFYEGLSLPSWISLLSNLISLNLWNCNKIVLLQLLGKLPSLKNLRV 786

Query: 182  WDLDNLEECEEIVPSNNQGEGDIQLPCLREVIIRNCPK----LKVVPHYMFSHTLKNLEM 349
            + ++NL+  ++    +  G      P L  + ++  P     LKV    MF   L NL +
Sbjct: 787  YRMNNLKYLDD--DESEDGMEVRVFPSLEVLYLQRLPNIEGLLKVERGEMFP-CLSNLTI 843

Query: 350  NDCPELGEVQPCLPPLLEYLHLESDVGVFSKSLPLVGKCSHNSSYPNLNRLIWSSPH--S 523
            + CP++G   PCLP L + L++E       +S+         S++  L +LI       +
Sbjct: 844  SYCPKIG--LPCLPSLKD-LYVEGCNNELLRSI---------STFRGLTQLILYEGEGIT 891

Query: 524  SLPKG-FNRLTSIQSLGLYRCETLD 595
            S P+G F  LTS+QSL +  C  L+
Sbjct: 892  SFPEGMFKNLTSLQSLSIISCNELE 916


>ref|XP_003634908.1| PREDICTED: putative disease resistance protein At3g14460-like [Vitis
            vinifera]
          Length = 1280

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 72/240 (30%), Positives = 115/240 (47%), Gaps = 43/240 (17%)
 Frame = +2

Query: 2    KNLQPHDNLEELAIEWYPGLHFPDWIAR--LSNLVNLKLSYCKNLRVLPDLSKLKSLETL 175
            + LQPH+NL+EL IE+Y G  FP+W++    +N+V+++L  CKN   LP L +L SL+ L
Sbjct: 765  EKLQPHNNLKELTIEYYCGEKFPNWLSEHSFTNMVSMQLHDCKNCSSLPSLGQLGSLKEL 824

Query: 176  YLWDLDNLEEC------------------------EEIVPSNNQGEGDIQLPCLREVIIR 283
             +  +D +++                         EE++        +I+ PCL+E+ I+
Sbjct: 825  SIMRIDGVQKVGQEFYGNIGSSSFKPFEALEILRFEEMLEWEEWVCREIEFPCLKELYIK 884

Query: 284  NCPKLKV-VPHYMFSHTLKNLEMNDCPELGEVQPCLP--PLLEYLHLE--SDVGVFS--- 439
             CPKLK  +P ++    L  LE+ +C +L     CLP  P +  L LE   DV V S   
Sbjct: 885  KCPKLKKDLPKHL--PKLTKLEIRECKQL---VCCLPMAPSIRKLELEKCDDVVVRSAGS 939

Query: 440  ----KSLPLVGKCSHNSSYPNLNRLI-----WSSPHSSLPKGFNRLTSIQSLGLYRCETL 592
                 SL +   C        L+ L+     +      +P   + LTS++ L +  CE+L
Sbjct: 940  LTSLASLDISNVCKIPDELGQLHSLVELYVLFCPELKEIPPILHNLTSLKDLKVENCESL 999


>ref|XP_002269571.2| PREDICTED: putative disease resistance protein At3g14460-like [Vitis
            vinifera]
          Length = 1330

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 70/237 (29%), Positives = 110/237 (46%), Gaps = 40/237 (16%)
 Frame = +2

Query: 2    KNLQPHDNLEELAIEWYPGLHFPDWIAR--LSNLVNLKLSYCKNLRVLPDLSKLKSLETL 175
            + LQPH+NL+EL IE Y G  FP+W+     +N+V+++L  CKN   LP L +L SL+ L
Sbjct: 765  EKLQPHNNLKELTIEHYCGEKFPNWLGEHSFTNMVSMQLHDCKNCSFLPSLGQLGSLKEL 824

Query: 176  YLWDLDNLE------------------ECEEIVPSNNQGE------GDIQLPCLREVIIR 283
             +  +D ++                  E  EI+      E       +I+ PCL+E+ I+
Sbjct: 825  SIMRIDGVQKVGQEFCGNIGSSSFKPFEALEILRFEKMLEWEEWVCREIEFPCLKELCIK 884

Query: 284  NCPKLKV-VPHYMFSHTLKNLEMNDCPELGEVQPCLPPLLEYLHLESDVGVFSK------ 442
             CPKLK  +P ++    L  LE+ +C +L    P  P + E + +E D  V         
Sbjct: 885  ICPKLKKDLPKHL--PKLTKLEIRECKQLVCCLPMAPSIRELMLVECDDVVVRSAGSLTS 942

Query: 443  --SLPLVGKCSHNSSYPNLNRLIWSSPH-----SSLPKGFNRLTSIQSLGLYRCETL 592
              SL +   C        LN L+  S         +P   + LTS++ L +  C++L
Sbjct: 943  LASLDIRNVCKIPDELGQLNSLVKLSVSGCPELKEMPPILHNLTSLKHLDIRYCDSL 999


>emb|CBI28621.3| unnamed protein product [Vitis vinifera]
          Length = 549

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 70/237 (29%), Positives = 110/237 (46%), Gaps = 40/237 (16%)
 Frame = +2

Query: 2   KNLQPHDNLEELAIEWYPGLHFPDWIAR--LSNLVNLKLSYCKNLRVLPDLSKLKSLETL 175
           + LQPH+NL+EL IE Y G  FP+W+     +N+V+++L  CKN   LP L +L SL+ L
Sbjct: 104 EKLQPHNNLKELTIEHYCGEKFPNWLGEHSFTNMVSMQLHDCKNCSFLPSLGQLGSLKEL 163

Query: 176 YLWDLDNLE------------------ECEEIVPSNNQGE------GDIQLPCLREVIIR 283
            +  +D ++                  E  EI+      E       +I+ PCL+E+ I+
Sbjct: 164 SIMRIDGVQKVGQEFCGNIGSSSFKPFEALEILRFEKMLEWEEWVCREIEFPCLKELCIK 223

Query: 284 NCPKLKV-VPHYMFSHTLKNLEMNDCPELGEVQPCLPPLLEYLHLESDVGVFSK------ 442
            CPKLK  +P ++    L  LE+ +C +L    P  P + E + +E D  V         
Sbjct: 224 ICPKLKKDLPKHL--PKLTKLEIRECKQLVCCLPMAPSIRELMLVECDDVVVRSAGSLTS 281

Query: 443 --SLPLVGKCSHNSSYPNLNRLIWSSPH-----SSLPKGFNRLTSIQSLGLYRCETL 592
             SL +   C        LN L+  S         +P   + LTS++ L +  C++L
Sbjct: 282 LASLDIRNVCKIPDELGQLNSLVKLSVSGCPELKEMPPILHNLTSLKHLDIRYCDSL 338


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