BLASTX nr result
ID: Coptis24_contig00010787
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00010787 (969 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002276446.2| PREDICTED: probable RNA-binding protein EIF1... 200 5e-49 ref|XP_004146450.1| PREDICTED: probable RNA-binding protein EIF1... 189 7e-46 ref|XP_004158969.1| PREDICTED: probable RNA-binding protein EIF1... 188 1e-45 ref|NP_001237534.1| uncharacterized protein LOC100306612 [Glycin... 188 1e-45 ref|XP_003558986.1| PREDICTED: probable RNA-binding protein EIF1... 185 2e-44 >ref|XP_002276446.2| PREDICTED: probable RNA-binding protein EIF1AD-like [Vitis vinifera] Length = 192 Score = 200 bits (508), Expect = 5e-49 Identities = 106/180 (58%), Positives = 125/180 (69%), Gaps = 27/180 (15%) Frame = +3 Query: 192 MKGGRKNLKRAAEE-AYTFQEGQCVMQVVSLRGSNLIEIMDDKGEKSLAIFPAKFQKSMW 368 MKGGRKNLKRAAEE T QEGQ +MQVVSLRG+NLIE+MD +GE SLA+FPAKFQKSMW Sbjct: 1 MKGGRKNLKRAAEEQTLTLQEGQSIMQVVSLRGTNLIEVMDARGENSLALFPAKFQKSMW 60 Query: 369 IKRGSFVVIDERGRDMALESGSKVTCIVSQVLFHEQLRVLQKSPEWPDVFRTVA------ 530 IK+GSFVV+DE GR+ A+ESGSKV CIVSQVLF+EQ+RVLQKS EWP++F++ Sbjct: 61 IKKGSFVVVDESGREKAMESGSKVACIVSQVLFYEQVRVLQKSIEWPEIFKSTLLHDSNG 120 Query: 531 --------------------DNSNDHLKTPICESTEELNSSDDDLPPIEENLNRRRPMEL 650 N N H T E E +S DD LPP+E N+NR RP+EL Sbjct: 121 TSLHSNTSQQEEFKSTARHDSNGNLHCSTSQQEEDESSSSDDDGLPPLEANMNRIRPLEL 180 >ref|XP_004146450.1| PREDICTED: probable RNA-binding protein EIF1AD-like [Cucumis sativus] Length = 169 Score = 189 bits (481), Expect = 7e-46 Identities = 98/157 (62%), Positives = 126/157 (80%), Gaps = 4/157 (2%) Frame = +3 Query: 192 MKGGRKNLKRAAEEAY-TFQEGQCVMQVVSLRGSNLIEIMDDKGEKSLAIFPAKFQKSMW 368 MKGGRKNL+RA+E + ++G +MQVVS+RGSNLIE+MD +GEKSLA+FPAKFQKSMW Sbjct: 1 MKGGRKNLQRASEHHIASLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60 Query: 369 IKRGSFVVIDERGRDMALESGSKVTCIVSQVLFHEQLRVLQKSPEWPDVFR-TVADNSND 545 IKRGSFVV+DE G+ ALESGSKV CIVS+VL+ EQ+R LQKSPEWP++F+ + + N+ Sbjct: 61 IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQIRELQKSPEWPEIFKNAIVGDRNE 120 Query: 546 HLKTPICESTE-ELNSSDDD-LPPIEENLNRRRPMEL 650 +L+ + E E+NSSDDD LPP+E N NR +P+ L Sbjct: 121 NLQAQNNQPGEDEVNSSDDDGLPPLEANTNRAKPLIL 157 >ref|XP_004158969.1| PREDICTED: probable RNA-binding protein EIF1AD-like [Cucumis sativus] Length = 169 Score = 188 bits (478), Expect = 1e-45 Identities = 97/157 (61%), Positives = 126/157 (80%), Gaps = 4/157 (2%) Frame = +3 Query: 192 MKGGRKNLKRAAEEAY-TFQEGQCVMQVVSLRGSNLIEIMDDKGEKSLAIFPAKFQKSMW 368 MKGGRKNL+RA+E + ++G +MQVVS+RGSNLIE+MD +GEKSLA+FPAKFQKSMW Sbjct: 1 MKGGRKNLQRASEHHIASLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60 Query: 369 IKRGSFVVIDERGRDMALESGSKVTCIVSQVLFHEQLRVLQKSPEWPDVFR-TVADNSND 545 IKRGSFVV+DE G+ ALESGSKV CIVS+VL+ EQ+R LQKSPEWP++F+ + + ++ Sbjct: 61 IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQIRELQKSPEWPEIFKNAIVGDRSE 120 Query: 546 HLKTPICESTE-ELNSSDDD-LPPIEENLNRRRPMEL 650 +L+ + E E+NSSDDD LPP+E N NR +P+ L Sbjct: 121 NLQAQNNQPVEDEVNSSDDDGLPPLEANTNRAKPLIL 157 >ref|NP_001237534.1| uncharacterized protein LOC100306612 [Glycine max] gi|255629065|gb|ACU14877.1| unknown [Glycine max] Length = 171 Score = 188 bits (478), Expect = 1e-45 Identities = 96/155 (61%), Positives = 120/155 (77%), Gaps = 2/155 (1%) Frame = +3 Query: 192 MKGGRKNLKRAAEEAY-TFQEGQCVMQVVSLRGSNLIEIMDDKGEKSLAIFPAKFQKSMW 368 M+GGRKNLKRA EE + T Q+GQ +MQVVSLRG+N+IE+MD G K LA+FPAK QKSMW Sbjct: 3 MRGGRKNLKRATEEKHITLQDGQGIMQVVSLRGANIIEVMDASGNKLLALFPAKIQKSMW 62 Query: 369 IKRGSFVVIDERGRDMALESGSKVTCIVSQVLFHEQLRVLQKSPEWPDVFRTVADNSNDH 548 IKRGSFVV+DE G++ ALESGSKV C+VSQVLF +Q+R L+KSPEWP+ F++ +D Sbjct: 63 IKRGSFVVVDESGKEKALESGSKVACLVSQVLFSKQVRELEKSPEWPESFKSAM--VDDS 120 Query: 549 LKTPICESTEELNSSDDD-LPPIEENLNRRRPMEL 650 +++ + EL SDDD LPP+E N NR RP EL Sbjct: 121 IESTTSQQEHELEGSDDDGLPPLEANTNRIRPAEL 155 >ref|XP_003558986.1| PREDICTED: probable RNA-binding protein EIF1AD-like [Brachypodium distachyon] Length = 164 Score = 185 bits (469), Expect = 2e-44 Identities = 94/157 (59%), Positives = 118/157 (75%), Gaps = 4/157 (2%) Frame = +3 Query: 192 MKGGRKNLKRAAEE--AYTFQEGQCVMQVVSLRGSNLIEIMDDKGEKSLAIFPAKFQKSM 365 MK GRKNL+RA +E A T +G+ +MQVV+LRGSNLIE++D KG KSLA+FPAKFQKS Sbjct: 1 MKAGRKNLRRACQEGAAVTLADGESIMQVVTLRGSNLIEVLDSKGVKSLALFPAKFQKSF 60 Query: 366 WIKRGSFVVIDERGRDMALESGSKVTCIVSQVLFHEQLRVLQKSPEWPDVFRTVADNSND 545 WIK G+FVV+D GRD ALESGSK+ C+VS+VLFH+Q+R L+KS EWP +F++ SN Sbjct: 61 WIKNGNFVVVDASGRDEALESGSKIACVVSRVLFHDQVRALEKSGEWPAIFKS---TSNA 117 Query: 546 HLKTPICESTEELNS--SDDDLPPIEENLNRRRPMEL 650 + EELNS DDDLPP+E N NR RP+E+ Sbjct: 118 WATGTTSKVEEELNSEEDDDDLPPLEANTNRNRPVEV 154