BLASTX nr result

ID: Coptis24_contig00010787 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010787
         (969 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276446.2| PREDICTED: probable RNA-binding protein EIF1...   200   5e-49
ref|XP_004146450.1| PREDICTED: probable RNA-binding protein EIF1...   189   7e-46
ref|XP_004158969.1| PREDICTED: probable RNA-binding protein EIF1...   188   1e-45
ref|NP_001237534.1| uncharacterized protein LOC100306612 [Glycin...   188   1e-45
ref|XP_003558986.1| PREDICTED: probable RNA-binding protein EIF1...   185   2e-44

>ref|XP_002276446.2| PREDICTED: probable RNA-binding protein EIF1AD-like [Vitis
           vinifera]
          Length = 192

 Score =  200 bits (508), Expect = 5e-49
 Identities = 106/180 (58%), Positives = 125/180 (69%), Gaps = 27/180 (15%)
 Frame = +3

Query: 192 MKGGRKNLKRAAEE-AYTFQEGQCVMQVVSLRGSNLIEIMDDKGEKSLAIFPAKFQKSMW 368
           MKGGRKNLKRAAEE   T QEGQ +MQVVSLRG+NLIE+MD +GE SLA+FPAKFQKSMW
Sbjct: 1   MKGGRKNLKRAAEEQTLTLQEGQSIMQVVSLRGTNLIEVMDARGENSLALFPAKFQKSMW 60

Query: 369 IKRGSFVVIDERGRDMALESGSKVTCIVSQVLFHEQLRVLQKSPEWPDVFRTVA------ 530
           IK+GSFVV+DE GR+ A+ESGSKV CIVSQVLF+EQ+RVLQKS EWP++F++        
Sbjct: 61  IKKGSFVVVDESGREKAMESGSKVACIVSQVLFYEQVRVLQKSIEWPEIFKSTLLHDSNG 120

Query: 531 --------------------DNSNDHLKTPICESTEELNSSDDDLPPIEENLNRRRPMEL 650
                                N N H  T   E  E  +S DD LPP+E N+NR RP+EL
Sbjct: 121 TSLHSNTSQQEEFKSTARHDSNGNLHCSTSQQEEDESSSSDDDGLPPLEANMNRIRPLEL 180


>ref|XP_004146450.1| PREDICTED: probable RNA-binding protein EIF1AD-like [Cucumis
           sativus]
          Length = 169

 Score =  189 bits (481), Expect = 7e-46
 Identities = 98/157 (62%), Positives = 126/157 (80%), Gaps = 4/157 (2%)
 Frame = +3

Query: 192 MKGGRKNLKRAAEEAY-TFQEGQCVMQVVSLRGSNLIEIMDDKGEKSLAIFPAKFQKSMW 368
           MKGGRKNL+RA+E    + ++G  +MQVVS+RGSNLIE+MD +GEKSLA+FPAKFQKSMW
Sbjct: 1   MKGGRKNLQRASEHHIASLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60

Query: 369 IKRGSFVVIDERGRDMALESGSKVTCIVSQVLFHEQLRVLQKSPEWPDVFR-TVADNSND 545
           IKRGSFVV+DE G+  ALESGSKV CIVS+VL+ EQ+R LQKSPEWP++F+  +  + N+
Sbjct: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQIRELQKSPEWPEIFKNAIVGDRNE 120

Query: 546 HLKTPICESTE-ELNSSDDD-LPPIEENLNRRRPMEL 650
           +L+    +  E E+NSSDDD LPP+E N NR +P+ L
Sbjct: 121 NLQAQNNQPGEDEVNSSDDDGLPPLEANTNRAKPLIL 157


>ref|XP_004158969.1| PREDICTED: probable RNA-binding protein EIF1AD-like [Cucumis
           sativus]
          Length = 169

 Score =  188 bits (478), Expect = 1e-45
 Identities = 97/157 (61%), Positives = 126/157 (80%), Gaps = 4/157 (2%)
 Frame = +3

Query: 192 MKGGRKNLKRAAEEAY-TFQEGQCVMQVVSLRGSNLIEIMDDKGEKSLAIFPAKFQKSMW 368
           MKGGRKNL+RA+E    + ++G  +MQVVS+RGSNLIE+MD +GEKSLA+FPAKFQKSMW
Sbjct: 1   MKGGRKNLQRASEHHIASLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60

Query: 369 IKRGSFVVIDERGRDMALESGSKVTCIVSQVLFHEQLRVLQKSPEWPDVFR-TVADNSND 545
           IKRGSFVV+DE G+  ALESGSKV CIVS+VL+ EQ+R LQKSPEWP++F+  +  + ++
Sbjct: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQIRELQKSPEWPEIFKNAIVGDRSE 120

Query: 546 HLKTPICESTE-ELNSSDDD-LPPIEENLNRRRPMEL 650
           +L+    +  E E+NSSDDD LPP+E N NR +P+ L
Sbjct: 121 NLQAQNNQPVEDEVNSSDDDGLPPLEANTNRAKPLIL 157


>ref|NP_001237534.1| uncharacterized protein LOC100306612 [Glycine max]
           gi|255629065|gb|ACU14877.1| unknown [Glycine max]
          Length = 171

 Score =  188 bits (478), Expect = 1e-45
 Identities = 96/155 (61%), Positives = 120/155 (77%), Gaps = 2/155 (1%)
 Frame = +3

Query: 192 MKGGRKNLKRAAEEAY-TFQEGQCVMQVVSLRGSNLIEIMDDKGEKSLAIFPAKFQKSMW 368
           M+GGRKNLKRA EE + T Q+GQ +MQVVSLRG+N+IE+MD  G K LA+FPAK QKSMW
Sbjct: 3   MRGGRKNLKRATEEKHITLQDGQGIMQVVSLRGANIIEVMDASGNKLLALFPAKIQKSMW 62

Query: 369 IKRGSFVVIDERGRDMALESGSKVTCIVSQVLFHEQLRVLQKSPEWPDVFRTVADNSNDH 548
           IKRGSFVV+DE G++ ALESGSKV C+VSQVLF +Q+R L+KSPEWP+ F++     +D 
Sbjct: 63  IKRGSFVVVDESGKEKALESGSKVACLVSQVLFSKQVRELEKSPEWPESFKSAM--VDDS 120

Query: 549 LKTPICESTEELNSSDDD-LPPIEENLNRRRPMEL 650
           +++   +   EL  SDDD LPP+E N NR RP EL
Sbjct: 121 IESTTSQQEHELEGSDDDGLPPLEANTNRIRPAEL 155


>ref|XP_003558986.1| PREDICTED: probable RNA-binding protein EIF1AD-like [Brachypodium
           distachyon]
          Length = 164

 Score =  185 bits (469), Expect = 2e-44
 Identities = 94/157 (59%), Positives = 118/157 (75%), Gaps = 4/157 (2%)
 Frame = +3

Query: 192 MKGGRKNLKRAAEE--AYTFQEGQCVMQVVSLRGSNLIEIMDDKGEKSLAIFPAKFQKSM 365
           MK GRKNL+RA +E  A T  +G+ +MQVV+LRGSNLIE++D KG KSLA+FPAKFQKS 
Sbjct: 1   MKAGRKNLRRACQEGAAVTLADGESIMQVVTLRGSNLIEVLDSKGVKSLALFPAKFQKSF 60

Query: 366 WIKRGSFVVIDERGRDMALESGSKVTCIVSQVLFHEQLRVLQKSPEWPDVFRTVADNSND 545
           WIK G+FVV+D  GRD ALESGSK+ C+VS+VLFH+Q+R L+KS EWP +F++    SN 
Sbjct: 61  WIKNGNFVVVDASGRDEALESGSKIACVVSRVLFHDQVRALEKSGEWPAIFKS---TSNA 117

Query: 546 HLKTPICESTEELNS--SDDDLPPIEENLNRRRPMEL 650
                  +  EELNS   DDDLPP+E N NR RP+E+
Sbjct: 118 WATGTTSKVEEELNSEEDDDDLPPLEANTNRNRPVEV 154


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