BLASTX nr result

ID: Coptis24_contig00010772 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010772
         (1228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279758.1| PREDICTED: uncharacterized protein LOC100258...    77   1e-11
gb|AFK34149.1| unknown [Lotus japonicus]                               65   4e-08
ref|XP_003519515.1| PREDICTED: uncharacterized protein LOC100806...    62   4e-07
ref|XP_002873566.1| hypothetical protein ARALYDRAFT_488082 [Arab...    61   5e-07
ref|XP_002313251.1| predicted protein [Populus trichocarpa] gi|2...    61   5e-07

>ref|XP_002279758.1| PREDICTED: uncharacterized protein LOC100258543 [Vitis vinifera]
           gi|296083837|emb|CBI24225.3| unnamed protein product
           [Vitis vinifera]
          Length = 191

 Score = 76.6 bits (187), Expect = 1e-11
 Identities = 68/182 (37%), Positives = 90/182 (49%), Gaps = 12/182 (6%)
 Frame = +1

Query: 133 VFQNQNFDIPHEGLKKKIDSSILKTSQKKVGG--GRKPLQDISNASSNRQKGTTTKKKGL 306
           + Q +NF I ++      +S   KT+ KK GG   RK L +I+N S+   + T+ KKK L
Sbjct: 11  IIQKENFGIQNKKAVVGGNSKNSKTTAKKAGGLGNRKALDNITNKSTLHHE-TSLKKKHL 69

Query: 307 NVAKEEFNIADERFLHDPKKRIAAQKAEIEQNLRDTVLFEHG--LLQSDTSPKSEKPKAA 480
              KEEFNIA+ERFLHD KK I AQKA  E    D VL  HG  +  SD+   +E P+A 
Sbjct: 70  --PKEEFNIAEERFLHDHKKCIEAQKAATEPCFLDIVLPGHGNHINLSDSISHAEYPQA- 126

Query: 481 STSSVQRYLD-----LESIPEVQVSGKSVW---CPSPMQLDSPLPSASIYELPNLAMLRE 636
                + YLD     LE +          W     SP+  DSP  S    +   +  L +
Sbjct: 127 --KQAKIYLDSTCDSLEPVELPMSEFLDQWKSPQSSPVHWDSPPSSPFTLQFEPVEFLLK 184

Query: 637 PE 642
           PE
Sbjct: 185 PE 186



 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 41/111 (36%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
 Frame = +1

Query: 724  KDSQKKVSS--GRKQLQDFSNCSSIHQEASTRMSNF-SEDFNVAEEGFLHDHSMCIAAQK 894
            K + KK      RK L + +N S++H E S +  +   E+FN+AEE FLHDH  CI AQK
Sbjct: 34   KTTAKKAGGLGNRKALDNITNKSTLHHETSLKKKHLPKEEFNIAEERFLHDHKKCIEAQK 93

Query: 895  AQMEQDHYSAFLFDHGLLDSDISESSSNAK--EAVEAALGSSRRFLELEPI 1041
            A  E       L  HG    ++S+S S+A+  +A +A +        LEP+
Sbjct: 94   AATEPCFLDIVLPGHG-NHINLSDSISHAEYPQAKQAKIYLDSTCDSLEPV 143


>gb|AFK34149.1| unknown [Lotus japonicus]
          Length = 184

 Score = 65.1 bits (157), Expect = 4e-08
 Identities = 62/170 (36%), Positives = 86/170 (50%), Gaps = 4/170 (2%)
 Frame = +1

Query: 106 MSRVRGPGSVF-QNQNFDIPHEGLKKKIDSSILKTSQKKVG---GGRKPLQDISNASSNR 273
           M+++  PG +  ++ N DI  +     + S   K   KK G    GRK L DISN +S R
Sbjct: 1   MAKLVAPGRLMIKDDNLDIHPKKAGFNVKSKNSKLDGKKGGLGKSGRKALNDISNKTS-R 59

Query: 274 QKGTTTKKKGLNVAKEEFNIADERFLHDPKKRIAAQKAEIEQNLRDTVLFEHGLLQSDTS 453
           Q  T+ +KK  N+ KE+ NI +E FLHD KK I AQKA +     +TV     L Q D+ 
Sbjct: 60  QTETSVQKK--NLPKEDVNIKEEMFLHDHKKCIEAQKAAMNNFNLETV-----LPQDDSF 112

Query: 454 PKSEKPKAASTSSVQRYLDLESIPEVQVSGKSVWCPSPMQLDSPLPSASI 603
              E+ K     S + Y + E +P   +S  S W    MQ  SP PS+ +
Sbjct: 113 SILEQIKV--PHSTRCYPEPEELP---MSEFSDWLDYSMQWSSP-PSSPL 156



 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 36/85 (42%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
 Frame = +1

Query: 658 QNQNLDFHHEGPASNKMTSSMFKDSQKKV--SSGRKQLQDFSNCSSIHQEASTRMSNF-S 828
           ++ NLD H +    N  + +   D +K     SGRK L D SN +S   E S +  N   
Sbjct: 13  KDDNLDIHPKKAGFNVKSKNSKLDGKKGGLGKSGRKALNDISNKTSRQTETSVQKKNLPK 72

Query: 829 EDFNVAEEGFLHDHSMCIAAQKAQM 903
           ED N+ EE FLHDH  CI AQKA M
Sbjct: 73  EDVNIKEEMFLHDHKKCIEAQKAAM 97


>ref|XP_003519515.1| PREDICTED: uncharacterized protein LOC100806971 [Glycine max]
          Length = 182

 Score = 61.6 bits (148), Expect = 4e-07
 Identities = 57/171 (33%), Positives = 78/171 (45%), Gaps = 3/171 (1%)
 Frame = +1

Query: 175 KKKIDSSILKTSQKKVGGG---RKPLQDISNASSNRQKGTTTKKKGLNVAKEEFNIADER 345
           KK   S   KT+ KK G G   RK L DI+N SS        KK+  N+ KE+ N+ +E 
Sbjct: 22  KKTTKSKNSKTNGKKGGSGTAGRKALNDITNKSSLHHPEAPVKKR--NLPKEDINVKEEM 79

Query: 346 FLHDPKKRIAAQKAEIEQNLRDTVLFEHGLLQSDTSPKSEKPKAASTSSVQRYLDLESIP 525
           FLHD KK I AQ A +     +TV     L Q D+    E+ K     S Q Y +   +P
Sbjct: 80  FLHDHKKCIEAQNAAMRSFNLETV-----LPQDDSISILEQIKV--PHSPQCYPEPVELP 132

Query: 526 EVQVSGKSVWCPSPMQLDSPLPSASIYELPNLAMLREPEAGVTFQNQNLDF 678
             Q S    W    MQ  SP  S   ++         P + + +QN+ ++F
Sbjct: 133 MSQFSD---WFDHSMQWSSPPSSPLSWD--------SPPSPLAWQNEEVEF 172


>ref|XP_002873566.1| hypothetical protein ARALYDRAFT_488082 [Arabidopsis lyrata subsp.
            lyrata] gi|297319403|gb|EFH49825.1| hypothetical protein
            ARALYDRAFT_488082 [Arabidopsis lyrata subsp. lyrata]
          Length = 196

 Score = 61.2 bits (147), Expect = 5e-07
 Identities = 46/137 (33%), Positives = 72/137 (52%), Gaps = 7/137 (5%)
 Frame = +1

Query: 655  FQNQNLDFHH--EGPASNKMTSSMFKDSQKKVSSG---RKQLQDFSNCSSIHQEASTRMS 819
            FQ++N    H  +  A+ K  SS+   + KK  +G   RK L D +N S +  +AS++  
Sbjct: 12   FQDENALAAHGKKAVAAGKGKSSL--PAPKKNGTGFGNRKALHDITNKSKLQPQASSKTK 69

Query: 820  NFSE--DFNVAEEGFLHDHSMCIAAQKAQMEQDHYSAFLFDHGLLDSDISESSSNAKEAV 993
               E  DF++A+EGFLHDHS CI  Q+      ++S  +  HG  D++I+E       + 
Sbjct: 70   KNVEGVDFDIAKEGFLHDHSKCIEEQQQNQWDSYFSEHIILHG-HDTNINEGVPEYNNSK 128

Query: 994  EAALGSSRRFLELEPIP 1044
            E    +S  + EL+ IP
Sbjct: 129  EIDDENSHSWDELKEIP 145


>ref|XP_002313251.1| predicted protein [Populus trichocarpa] gi|222849659|gb|EEE87206.1|
           predicted protein [Populus trichocarpa]
          Length = 189

 Score = 61.2 bits (147), Expect = 5e-07
 Identities = 57/176 (32%), Positives = 82/176 (46%), Gaps = 7/176 (3%)
 Frame = +1

Query: 109 SRVRGPGSVFQNQNFDIPHEGLKKKIDSSIL--KTSQKKVGG----GRKPLQDISNASSN 270
           +RV     + Q++N  +  +  K   D S+   KT+ KK GG     RK L DI+N +  
Sbjct: 3   TRVTQTPLIIQDENLGVSRK--KAGFDGSVKQSKTATKKSGGFALGNRKALNDITNKAVV 60

Query: 271 RQKGTTTKKKGLNVAKEEFN-IADERFLHDPKKRIAAQKAEIEQNLRDTVLFEHGLLQSD 447
           RQ+ ++ KK   NV KEE N +A+ERFLHD  K I  ++A    +  D VL  H      
Sbjct: 61  RQETSSRKK---NVQKEEINNVAEERFLHDHNKCIEEKEATSISSFLDLVLPGH----DS 113

Query: 448 TSPKSEKPKAASTSSVQRYLDLESIPEVQVSGKSVWCPSPMQLDSPLPSASIYELP 615
            S  +E P+   T     +       E+ +   S W  SP Q  SP  S   ++ P
Sbjct: 114 VSSTAENPEVKQTDPGSCF--YPEPKELAIPVFSDWFESPTQWHSPPCSPIHWDSP 167


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