BLASTX nr result

ID: Coptis24_contig00010765 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010765
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265152.2| PREDICTED: uncharacterized protein LOC100265...   154   5e-36
emb|CBI30727.3| unnamed protein product [Vitis vinifera]              154   5e-36
ref|XP_002522268.1| conserved hypothetical protein [Ricinus comm...   152   3e-35
ref|XP_002305053.1| predicted protein [Populus trichocarpa] gi|2...   150   8e-35
ref|XP_002300448.1| predicted protein [Populus trichocarpa] gi|2...   147   1e-33

>ref|XP_002265152.2| PREDICTED: uncharacterized protein LOC100265127 [Vitis vinifera]
          Length = 514

 Score =  154 bits (390), Expect = 5e-36
 Identities = 76/139 (54%), Positives = 84/139 (60%)
 Frame = +3

Query: 3   KGGGRNSQFYLMDMGSCWKNNGKPCDGEVTSDVTRYSEMIINPETXXXXXXXXXXXXXXX 182
           +GGG +SQFYLMD+GSCWKNNG+PCDG VTSDVTRYSEMIINP T               
Sbjct: 315 QGGGPSSQFYLMDIGSCWKNNGQPCDGNVTSDVTRYSEMIINPNTSALCRPDNLNVCPPY 374

Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGTRVHRTDTTRYPYKAYHLHCSPGNAQH 362
                                          NGTRVHR DT RYPY AY+ +CSPGN QH
Sbjct: 375 HTFP---------------------------NGTRVHRNDTARYPYAAYYFYCSPGNGQH 407

Query: 363 LEEPYGLCDPFSDPQPQEI 419
           LEEPY LCDPFS+PQPQE+
Sbjct: 408 LEEPYHLCDPFSNPQPQEL 426


>emb|CBI30727.3| unnamed protein product [Vitis vinifera]
          Length = 467

 Score =  154 bits (390), Expect = 5e-36
 Identities = 76/139 (54%), Positives = 84/139 (60%)
 Frame = +3

Query: 3   KGGGRNSQFYLMDMGSCWKNNGKPCDGEVTSDVTRYSEMIINPETXXXXXXXXXXXXXXX 182
           +GGG +SQFYLMD+GSCWKNNG+PCDG VTSDVTRYSEMIINP T               
Sbjct: 268 QGGGPSSQFYLMDIGSCWKNNGQPCDGNVTSDVTRYSEMIINPNTSALCRPDNLNVCPPY 327

Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGTRVHRTDTTRYPYKAYHLHCSPGNAQH 362
                                          NGTRVHR DT RYPY AY+ +CSPGN QH
Sbjct: 328 HTFP---------------------------NGTRVHRNDTARYPYAAYYFYCSPGNGQH 360

Query: 363 LEEPYGLCDPFSDPQPQEI 419
           LEEPY LCDPFS+PQPQE+
Sbjct: 361 LEEPYHLCDPFSNPQPQEL 379


>ref|XP_002522268.1| conserved hypothetical protein [Ricinus communis]
           gi|223538521|gb|EEF40126.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 506

 Score =  152 bits (384), Expect = 3e-35
 Identities = 75/139 (53%), Positives = 83/139 (59%)
 Frame = +3

Query: 3   KGGGRNSQFYLMDMGSCWKNNGKPCDGEVTSDVTRYSEMIINPETXXXXXXXXXXXXXXX 182
           KGGG +SQFYLMD+GSCWKNNG+PCDG VTSDVTRYSEMIINP                 
Sbjct: 309 KGGGPSSQFYLMDIGSCWKNNGQPCDGNVTSDVTRYSEMIINPNISSWCHPSNLNVCPPY 368

Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGTRVHRTDTTRYPYKAYHLHCSPGNAQH 362
                                          NGTRVHR DT  +PY AYHL+CSPGNA+H
Sbjct: 369 HTFS---------------------------NGTRVHRNDTAHFPYAAYHLYCSPGNAEH 401

Query: 363 LEEPYGLCDPFSDPQPQEI 419
           LE PY LCDP+S+PQPQEI
Sbjct: 402 LEVPYSLCDPYSNPQPQEI 420


>ref|XP_002305053.1| predicted protein [Populus trichocarpa] gi|222848017|gb|EEE85564.1|
           predicted protein [Populus trichocarpa]
          Length = 450

 Score =  150 bits (380), Expect = 8e-35
 Identities = 74/138 (53%), Positives = 83/138 (60%)
 Frame = +3

Query: 6   GGGRNSQFYLMDMGSCWKNNGKPCDGEVTSDVTRYSEMIINPETXXXXXXXXXXXXXXXX 185
           GGG +SQFYLMDMGSCWKN+GKPCDG VTSDVTRYSEMIINP                  
Sbjct: 254 GGGPSSQFYLMDMGSCWKNDGKPCDGNVTSDVTRYSEMIINPNISSWCHPNNLNVCPPYH 313

Query: 186 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGTRVHRTDTTRYPYKAYHLHCSPGNAQHL 365
                                         +GTR+HR DT R+PY AYHL+CSPGNA+HL
Sbjct: 314 TFP---------------------------DGTRIHRNDTARFPYAAYHLYCSPGNAEHL 346

Query: 366 EEPYGLCDPFSDPQPQEI 419
           E PY LCDP+S+PQPQEI
Sbjct: 347 EFPYSLCDPYSNPQPQEI 364


>ref|XP_002300448.1| predicted protein [Populus trichocarpa] gi|222847706|gb|EEE85253.1|
           predicted protein [Populus trichocarpa]
          Length = 417

 Score =  147 bits (370), Expect = 1e-33
 Identities = 72/139 (51%), Positives = 83/139 (59%)
 Frame = +3

Query: 3   KGGGRNSQFYLMDMGSCWKNNGKPCDGEVTSDVTRYSEMIINPETXXXXXXXXXXXXXXX 182
           +GGG NSQFYLMD+G CWKNNGKPCD +VT+DVTRYSEMIINPET               
Sbjct: 264 QGGGPNSQFYLMDIGGCWKNNGKPCDRDVTTDVTRYSEMIINPET--------------- 308

Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGTRVHRTDTTRYPYKAYHLHCSPGNAQH 362
                                          NGT++HRTD   YPY AYHL C+PGNA+H
Sbjct: 309 ------------KSWCKPESLKLCPPYHFFSNGTKIHRTDKENYPYDAYHLWCAPGNAEH 356

Query: 363 LEEPYGLCDPFSDPQPQEI 419
           +EEPY LCDP+S+PQ QEI
Sbjct: 357 VEEPYILCDPYSNPQAQEI 375


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