BLASTX nr result

ID: Coptis24_contig00010723 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010723
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EHH65989.1| hypothetical protein EGM_02875, partial [Macaca f...    56   3e-06
gb|EGD78405.1| hypothetical protein PTSG_09101 [Salpingoeca sp. ...    54   1e-05

>gb|EHH65989.1| hypothetical protein EGM_02875, partial [Macaca fascicularis]
          Length = 168

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 42/127 (33%), Positives = 57/127 (44%), Gaps = 3/127 (2%)
 Frame = +2

Query: 14  HIHKHSHQHF-THYH-NCHTNTHSCSPRLHAHVSAVTT*ALNTYHFTHPKQHLFLFTELH 187
           H H H+H H  TH H + HT TH+ + R HAH  A T    NT+  TH   H    T  H
Sbjct: 34  HTHTHTHTHTRTHTHTHTHTRTHTHT-RTHAHTHAHTRTHTNTHAHTHTHAH----THTH 88

Query: 188 YTNHSPAPSESHFNRRTH-HVHTLV*NILWQ*QRTAHTKLCSSSNTMAQSLPSRHKQQAF 364
              H+ A + +H + RTH H HT         +  AHT   + ++T A +    H     
Sbjct: 89  AHTHTHAHTRTHTHARTHTHAHT---------RTHAHTHTRAHTHTHAHTHTHTHPHTHT 139

Query: 365 NTKPVHH 385
           +T    H
Sbjct: 140 HTHTRTH 146


>gb|EGD78405.1| hypothetical protein PTSG_09101 [Salpingoeca sp. ATCC 50818]
          Length = 586

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
 Frame = +2

Query: 14  HIHKHSHQH-----FTHYHNCHTNTHSCSPRL-HAHVSAVTT*ALNTYHFTHPKQHLFLF 175
           H+H H+H H     +TH H  HT TH+C+  L HA     T    +T+  TH   H    
Sbjct: 287 HMHSHTHMHSHTCTYTHTHT-HTCTHTCAHTLTHALTHTHTHTHTHTHTHTHTHTHTHTH 345

Query: 176 TELHYTNHSPAPSESHFNRRTHHV--HTL 256
           T  H   H+PA + +H +  TH +  HT+
Sbjct: 346 THTHAHTHTPAHTHAHTHAHTHTIPPHTM 374


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