BLASTX nr result

ID: Coptis24_contig00010712 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010712
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003581092.1| PREDICTED: uncharacterized protein LOC100838...   123   1e-26
gb|EEE60724.1| hypothetical protein OsJ_14235 [Oryza sativa Japo...   121   7e-26
gb|EEC77006.1| hypothetical protein OsI_15335 [Oryza sativa Indi...   121   7e-26
ref|XP_002511132.1| zinc finger protein, putative [Ricinus commu...   120   1e-25
ref|XP_002280533.2| PREDICTED: uncharacterized protein LOC100266...   120   2e-25

>ref|XP_003581092.1| PREDICTED: uncharacterized protein LOC100838258 [Brachypodium
           distachyon]
          Length = 798

 Score =  123 bits (309), Expect = 1e-26
 Identities = 56/79 (70%), Positives = 68/79 (86%), Gaps = 2/79 (2%)
 Frame = +2

Query: 2   GRQVQHHKIVNDMMLVEKRCYRPVSADGVP--SNVSADVTIGFVKDAKYHIDVQGFSVYH 175
           G++++HH IV DMML ++  YRPV+ +GVP  SN+ ADVTIGFVKDAK+H+DVQGF+VYH
Sbjct: 407 GKEIEHHNIVTDMMLKKEVTYRPVATNGVPKDSNMVADVTIGFVKDAKHHVDVQGFNVYH 466

Query: 176 KNRLIKPFWRVWNAAGSNG 232
           KNRLIKPFWRVW AAGS G
Sbjct: 467 KNRLIKPFWRVWTAAGSGG 485


>gb|EEE60724.1| hypothetical protein OsJ_14235 [Oryza sativa Japonica Group]
          Length = 788

 Score =  121 bits (303), Expect = 7e-26
 Identities = 55/79 (69%), Positives = 68/79 (86%), Gaps = 2/79 (2%)
 Frame = +2

Query: 2   GRQVQHHKIVNDMMLVEKRCYRPVSADGVP--SNVSADVTIGFVKDAKYHIDVQGFSVYH 175
           G++++HH IV DMML ++  Y+PV+ +GVP  SN+ ADVTIGFVKDAK+H+DVQGF+VYH
Sbjct: 394 GKEIEHHNIVTDMMLKKEVKYKPVAPNGVPKDSNMVADVTIGFVKDAKHHVDVQGFNVYH 453

Query: 176 KNRLIKPFWRVWNAAGSNG 232
           KNRLIKPFWRVW AAGS G
Sbjct: 454 KNRLIKPFWRVWTAAGSGG 472


>gb|EEC77006.1| hypothetical protein OsI_15335 [Oryza sativa Indica Group]
          Length = 764

 Score =  121 bits (303), Expect = 7e-26
 Identities = 55/79 (69%), Positives = 68/79 (86%), Gaps = 2/79 (2%)
 Frame = +2

Query: 2   GRQVQHHKIVNDMMLVEKRCYRPVSADGVP--SNVSADVTIGFVKDAKYHIDVQGFSVYH 175
           G++++HH IV DMML ++  Y+PV+ +GVP  SN+ ADVTIGFVKDAK+H+DVQGF+VYH
Sbjct: 370 GKEIEHHNIVTDMMLKKEVKYKPVAPNGVPKDSNMVADVTIGFVKDAKHHVDVQGFNVYH 429

Query: 176 KNRLIKPFWRVWNAAGSNG 232
           KNRLIKPFWRVW AAGS G
Sbjct: 430 KNRLIKPFWRVWTAAGSGG 448


>ref|XP_002511132.1| zinc finger protein, putative [Ricinus communis]
           gi|223550247|gb|EEF51734.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 816

 Score =  120 bits (301), Expect = 1e-25
 Identities = 57/82 (69%), Positives = 69/82 (84%), Gaps = 5/82 (6%)
 Frame = +2

Query: 2   GRQVQHHKIVNDMMLVEKRCYRPVSADGVP-----SNVSADVTIGFVKDAKYHIDVQGFS 166
           G+ V+HH IVNDMML ++  YRP SADGV      ++++A VTIGFVKDAK+HIDVQGF+
Sbjct: 412 GKDVEHHNIVNDMMLSQEITYRPQSADGVAKDFNLNHMAAIVTIGFVKDAKHHIDVQGFN 471

Query: 167 VYHKNRLIKPFWRVWNAAGSNG 232
           VYHKNRLIKPFWR+WNAAGS+G
Sbjct: 472 VYHKNRLIKPFWRLWNAAGSDG 493


>ref|XP_002280533.2| PREDICTED: uncharacterized protein LOC100266246 [Vitis vinifera]
          Length = 2234

 Score =  120 bits (300), Expect = 2e-25
 Identities = 57/80 (71%), Positives = 68/80 (85%), Gaps = 3/80 (3%)
 Frame = +2

Query: 2    GRQVQHHKIVNDMMLVEKRCYRPV-SADGVPS--NVSADVTIGFVKDAKYHIDVQGFSVY 172
            G+ V+HH +VNDMM+ ++  YRP  SADGVP   N+ A VTIGFVKDAK+HIDVQGF+VY
Sbjct: 1830 GKDVEHHNVVNDMMMTQEVTYRPQPSADGVPKDLNMVAVVTIGFVKDAKHHIDVQGFNVY 1889

Query: 173  HKNRLIKPFWRVWNAAGSNG 232
            HKNRLIKPFWR+WNAAGS+G
Sbjct: 1890 HKNRLIKPFWRLWNAAGSDG 1909


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