BLASTX nr result

ID: Coptis24_contig00010578 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010578
         (1537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276974.2| PREDICTED: uncharacterized protein LOC100266...   300   7e-79
ref|XP_003594019.1| Mediator of DNA damage checkpoint protein [M...   285   3e-74
emb|CBI26129.3| unnamed protein product [Vitis vinifera]              277   6e-72
ref|XP_004163099.1| PREDICTED: uncharacterized protein LOC101229...   274   4e-71
ref|XP_004152945.1| PREDICTED: uncharacterized LOC101214290 [Cuc...   274   4e-71

>ref|XP_002276974.2| PREDICTED: uncharacterized protein LOC100266667 [Vitis vinifera]
          Length = 1294

 Score =  300 bits (768), Expect = 7e-79
 Identities = 177/379 (46%), Positives = 230/379 (60%), Gaps = 7/379 (1%)
 Frame = +1

Query: 421  RTRQSKSNLINGVSNADALSISILGSESYRQFLDRQELEVS-----CNDXXXXXXXXXXX 585
            RT ++     N +++ D       G E+   F+ RQ    S      +            
Sbjct: 853  RTHRNLLGRANSITDLDGPPKPFAGQEAIEPFIPRQTRSKSKARGTFSGFDMKRKIQSSS 912

Query: 586  XAHCNISSLSPEKNSERRLIRQPVPEQAISVAADNSSLAVMSERVVPKGTPTETLSTRSV 765
             A   +SSL  ++NSE  L++Q + +     A  N S   ++ + + +    E  S  S 
Sbjct: 913  NASLGLSSL--DQNSEGILLKQSLDKPGAGDAMLNRSSVNLNRKKISRDPTGERASKHSE 970

Query: 766  KDCSGNHVSPTGGAEANASLDASPAGKANLSGTACVTPTNCTTPIHAASPVCIGNGYHKQ 945
             +   +  SP  G E NA L          SG+ C TP N  TP +AASPVC+GN Y KQ
Sbjct: 971  GNSDADPSSPAEGREGNAGLREM----CKPSGSVCTTPVNSVTPTNAASPVCMGNEYVKQ 1026

Query: 946  SCRKKISRSSLVIELTRLDSNEISLSNSPASKDLRKRRDLAGVRALFSHHLDEDVIRQQK 1125
            SC+K + R+SL+ E+  L   +     + A KD R+RR+++ VR LFS HLD+D+I+QQK
Sbjct: 1027 SCKKNL-RTSLLKEINNL--TDTGPGPTSAVKDSRRRREISNVRVLFSQHLDDDIIKQQK 1083

Query: 1126 KILVRLGALTACSSSEATHFVTDKFVRTRNMLEAIASGKPVVTHLWLESCGQASCFIDER 1305
            KIL RLG   A S S+ATHF+TD FVRTRNMLEAIA GKPVVTHLWLESC QA CFIDE+
Sbjct: 1084 KILTRLGVSVASSISDATHFITDAFVRTRNMLEAIAYGKPVVTHLWLESCVQARCFIDEK 1143

Query: 1306 NYILRDYKKEKDIGFSMQVSLARASQNPLLES--KRVFITPNVKLSMELVAILVKAVHGQ 1479
             YILRD KKEK++GFSM VSLARA Q+PLL++  ++V ITPN K   E++A LVKAV GQ
Sbjct: 1144 GYILRDAKKEKELGFSMPVSLARACQHPLLQAQGRKVLITPNTKPGKEIIASLVKAVDGQ 1203

Query: 1480 AVERLGRSVMKDYKVPDDL 1536
             VER+GRSV+KD K PDDL
Sbjct: 1204 PVERIGRSVLKDGKFPDDL 1222


>ref|XP_003594019.1| Mediator of DNA damage checkpoint protein [Medicago truncatula]
            gi|355483067|gb|AES64270.1| Mediator of DNA damage
            checkpoint protein [Medicago truncatula]
          Length = 1155

 Score =  285 bits (728), Expect = 3e-74
 Identities = 141/232 (60%), Positives = 179/232 (77%), Gaps = 8/232 (3%)
 Frame = +1

Query: 865  ACVTPTNCTTPIHAASPVCIGNGYHKQSCRKKISRS--------SLVIELTRLDSNEISL 1020
            A  +P NC TP++ ASPVC+G+ Y K+SC + +S+S         L+ E+  L ++   L
Sbjct: 854  ATTSPANCKTPVNNASPVCMGDDYFKKSCNRNLSKSCLHKVFRKDLLKEMRSLSASRPEL 913

Query: 1021 SNSPASKDLRKRRDLAGVRALFSHHLDEDVIRQQKKILVRLGALTACSSSEATHFVTDKF 1200
                 SKD RKR+D++ VR L+S HLDED+I+ QKKIL RLG   A S ++ATHF+TD+F
Sbjct: 914  ITP--SKDSRKRKDMSDVRILYSRHLDEDIIKHQKKILARLGVSVASSVADATHFITDQF 971

Query: 1201 VRTRNMLEAIASGKPVVTHLWLESCGQASCFIDERNYILRDYKKEKDIGFSMQVSLARAS 1380
            VRTRNMLEAIA GKPVVTHLW+ESCGQA+CF+DE+NYILRD KKEK+ GFSM VSLARAS
Sbjct: 972  VRTRNMLEAIAFGKPVVTHLWIESCGQANCFMDEKNYILRDAKKEKEFGFSMPVSLARAS 1031

Query: 1381 QNPLLESKRVFITPNVKLSMELVAILVKAVHGQAVERLGRSVMKDYKVPDDL 1536
            ++PLLE +RV ITPN K S E+++ LV AVHGQAVER+GRS +KD+K+PDDL
Sbjct: 1032 KHPLLEGRRVLITPNTKPSKEIISSLVSAVHGQAVERVGRSALKDHKIPDDL 1083


>emb|CBI26129.3| unnamed protein product [Vitis vinifera]
          Length = 1055

 Score =  277 bits (708), Expect = 6e-72
 Identities = 145/231 (62%), Positives = 174/231 (75%), Gaps = 4/231 (1%)
 Frame = +1

Query: 856  SGTACVTPTNCTTPIHAASPVCIGNGYHKQSCRKKISRSSLVIELTRLDSNEISLSNSPA 1035
            SG+ C TP N  TP +AASPVC+GN Y KQSC+K + R+SL+ E+  L   +     + A
Sbjct: 756  SGSVCTTPVNSVTPTNAASPVCMGNEYVKQSCKKNL-RTSLLKEINNL--TDTGPGPTSA 812

Query: 1036 SKDLRKRRDLAGVRALFSHHLDEDVIRQQKKILVRLGALTACSSSEATHFVTDKFVRTRN 1215
             KD R+RR+++ VR LFS HLD+D+I+QQKKIL RLG   A S S+ATHF+TD FVRTRN
Sbjct: 813  VKDSRRRREISNVRVLFSQHLDDDIIKQQKKILTRLGVSVASSISDATHFITDAFVRTRN 872

Query: 1216 MLEAIASGKPVVTHLWLESCGQASCFIDERNYILRDYKKEKDIGFSMQVSLARASQNPLL 1395
            MLEAIA GKPVVTHLWLESC QA CFIDE+ YILRD KKEK++GFSM VSLARA Q+PLL
Sbjct: 873  MLEAIAYGKPVVTHLWLESCVQARCFIDEKGYILRDAKKEKELGFSMPVSLARACQHPLL 932

Query: 1396 ----ESKRVFITPNVKLSMELVAILVKAVHGQAVERLGRSVMKDYKVPDDL 1536
                +S  + ITPN K   E++A LVKAV GQ VER+GRSV+KD K PDDL
Sbjct: 933  QAISQSYFILITPNTKPGKEIIASLVKAVDGQPVERIGRSVLKDGKFPDDL 983


>ref|XP_004163099.1| PREDICTED: uncharacterized protein LOC101229012 [Cucumis sativus]
          Length = 1163

 Score =  274 bits (701), Expect = 4e-71
 Identities = 139/238 (58%), Positives = 177/238 (74%), Gaps = 1/238 (0%)
 Frame = +1

Query: 826  DASPAGKANLSGTACVTPT-NCTTPIHAASPVCIGNGYHKQSCRKKISRSSLVIELTRLD 1002
            D SP+ +   S T C +P+ N  TPI++ SPVC+G+ Y+KQSC+K +S+SSL+ EL  L 
Sbjct: 856  DESPSKRHKPSVTVCTSPSDNSMTPINSVSPVCMGSEYYKQSCKKNLSKSSLLKELRDLT 915

Query: 1003 SNEISLSNSPASKDLRKRRDLAGVRALFSHHLDEDVIRQQKKILVRLGALTACSSSEATH 1182
            S+     + P     RKR+D+  VR L+S HLDE +I+QQKK L RLG     S +EATH
Sbjct: 916  SSGFVSRSCPTES--RKRKDMTDVRVLYSQHLDEGIIKQQKKTLTRLGVTVVSSMAEATH 973

Query: 1183 FVTDKFVRTRNMLEAIASGKPVVTHLWLESCGQASCFIDERNYILRDYKKEKDIGFSMQV 1362
            F+ DKFVRTRNMLEAIA GK VVTHLW++SCGQASCFIDE+N+ILRD KKEK++GFSM  
Sbjct: 974  FIADKFVRTRNMLEAIALGKLVVTHLWIDSCGQASCFIDEKNHILRDTKKEKEVGFSMPG 1033

Query: 1363 SLARASQNPLLESKRVFITPNVKLSMELVAILVKAVHGQAVERLGRSVMKDYKVPDDL 1536
            SLA A Q PLLE +RV ITPN K  + +++ LVK V GQAVER+GRS++KD ++PDDL
Sbjct: 1034 SLACARQRPLLEGRRVLITPNTKPGIAIISSLVKVVKGQAVERIGRSMLKDDQIPDDL 1091


>ref|XP_004152945.1| PREDICTED: uncharacterized LOC101214290 [Cucumis sativus]
          Length = 917

 Score =  274 bits (701), Expect = 4e-71
 Identities = 139/238 (58%), Positives = 177/238 (74%), Gaps = 1/238 (0%)
 Frame = +1

Query: 826  DASPAGKANLSGTACVTPT-NCTTPIHAASPVCIGNGYHKQSCRKKISRSSLVIELTRLD 1002
            D SP+ +   S T C +P+ N  TPI++ SPVC+G+ Y+KQSC+K +S+SSL+ EL  L 
Sbjct: 610  DESPSKRHKPSVTVCTSPSDNSMTPINSVSPVCMGSEYYKQSCKKNLSKSSLLKELRDLT 669

Query: 1003 SNEISLSNSPASKDLRKRRDLAGVRALFSHHLDEDVIRQQKKILVRLGALTACSSSEATH 1182
            S+     + P     RKR+D+  VR L+S HLDE +I+QQKK L RLG     S +EATH
Sbjct: 670  SSGFVSRSCPTES--RKRKDMTDVRVLYSQHLDEGIIKQQKKTLTRLGVTVVSSMAEATH 727

Query: 1183 FVTDKFVRTRNMLEAIASGKPVVTHLWLESCGQASCFIDERNYILRDYKKEKDIGFSMQV 1362
            F+ DKFVRTRNMLEAIA GK VVTHLW++SCGQASCFIDE+N+ILRD KKEK++GFSM  
Sbjct: 728  FIADKFVRTRNMLEAIALGKLVVTHLWIDSCGQASCFIDEKNHILRDTKKEKEVGFSMPG 787

Query: 1363 SLARASQNPLLESKRVFITPNVKLSMELVAILVKAVHGQAVERLGRSVMKDYKVPDDL 1536
            SLA A Q PLLE +RV ITPN K  + +++ LVK V GQAVER+GRS++KD ++PDDL
Sbjct: 788  SLACARQRPLLEGRRVLITPNTKPGIAIISSLVKVVKGQAVERIGRSMLKDDQIPDDL 845


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