BLASTX nr result

ID: Coptis24_contig00010546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010546
         (1500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518061.1| PREDICTED: uncharacterized protein LOC100797...   171   6e-40
ref|XP_002878181.1| hypothetical protein ARALYDRAFT_486249 [Arab...   163   1e-37
ref|XP_003611450.1| hypothetical protein MTR_5g014110 [Medicago ...   157   5e-36
ref|XP_002527421.1| conserved hypothetical protein [Ricinus comm...   157   5e-36
ref|XP_003535127.1| PREDICTED: uncharacterized protein LOC100796...   156   2e-35

>ref|XP_003518061.1| PREDICTED: uncharacterized protein LOC100797011 [Glycine max]
          Length = 336

 Score =  171 bits (432), Expect = 6e-40
 Identities = 125/367 (34%), Positives = 185/367 (50%), Gaps = 20/367 (5%)
 Frame = +2

Query: 290  MKASVKLRKEEAGHENPLVRFKLPIQILGLPFMSSFTAGDSKDLSFNLHTNFLNGPSIKL 469
            MKAS+K R+E   H+ PL R K+P+ ILG PF S   AG+SK+L+ NL T F +GPS+K+
Sbjct: 1    MKASLKFREE---HKKPLFRAKVPLSILGKPFQSGIVAGESKELTLNLCTFFESGPSLKV 57

Query: 470  SYTPTQTTTSDIHTHHHQPISLSLKSGVGLFGSPKNSPLIISAHFT---HFPNPTFSLHI 640
            +Y P  +           P SL +K+G G FGSP  S +++S  F+      +P F LH 
Sbjct: 58   AYRPNDS---------KNPFSLIVKTGTGPFGSPLKSSMLMSCEFSVPGRTGSPLFMLHF 108

Query: 641  KPQFGDFSLSKTAVS--------CTSPFNSGVECND--VERP------VVVMRNLCSGYE 772
            KP+FGDF+  KT  S          +  N  VE  +  VE P      V ++ +  SG  
Sbjct: 109  KPRFGDFTFKKTQSSIFDGKGFGSLNTQNDAVELENGTVETPLMESAKVSILGDGASGAV 168

Query: 773  DGVFSGVGVKAKTVLPVGKKAVEVKFRWGVNFPEE-SFDKMRLKLPFLTVDKISIXXXXX 949
             G+FSGV V A+T LPV  +A  VKFRWGV  P E   +    K+PFL +DKI +     
Sbjct: 169  AGMFSGVEVAARTTLPVRGRAA-VKFRWGVRVPSEFKGNNAFQKIPFLVMDKIGVEHMME 227

Query: 950  XXXXXXXXXXXXXSGIGDGEMLKGMCFWMKKEVEVLQRENNLIKESLEEMKMXXXXXXXX 1129
                         S +     +   CF +K+++EVLQ EN L++ ++E+++         
Sbjct: 228  CGVSKEKVSAGEKSRVPASADVAEACFAVKRQMEVLQAENGLLRNAVEDLRREIVGVRTS 287

Query: 1130 XXXXXXXDVSRPLGENSSEFEKRKNKKNGAEEKGRNEVKSKKFSGSDTSSGNDVVEELKR 1309
                     S  +G++ +    RKN+K    + G        F G  T +  +  E+LK+
Sbjct: 288  ---------SSVMGKSPN---LRKNEKKTTSDYG-------NFPGKSTEA--EASEKLKK 326

Query: 1310 AIMAASS 1330
            A+M A++
Sbjct: 327  ALMGAAA 333


>ref|XP_002878181.1| hypothetical protein ARALYDRAFT_486249 [Arabidopsis lyrata subsp.
            lyrata] gi|297324019|gb|EFH54440.1| hypothetical protein
            ARALYDRAFT_486249 [Arabidopsis lyrata subsp. lyrata]
          Length = 357

 Score =  163 bits (412), Expect = 1e-37
 Identities = 122/378 (32%), Positives = 181/378 (47%), Gaps = 32/378 (8%)
 Frame = +2

Query: 290  MKASVKLRKEEAGHENPLVRFKLPIQILGLPFMSSFTAGDSKDLSFNLHTNFLNGPSIKL 469
            MKAS+K R+E+     PL R K+P+ ILGLPF S   AG+SK+LS NL T F +GPS+K+
Sbjct: 1    MKASMKFREEQ----KPLFRAKVPLSILGLPFQSGIVAGESKELSLNLSTFFESGPSLKV 56

Query: 470  SYTPTQTTTSDIHTHHHQPISLSLKSGVGLFGSPKNSPLIISAHFTHF--PNPTFSLHIK 643
            +Y P  +           P SL +K+G G FGSP +S +++SA F      NP+F LH K
Sbjct: 57   AYRPNDS---------WNPFSLIVKTGSGSFGSPISSSMLMSAEFNLLGKGNPSFMLHFK 107

Query: 644  PQFGDFSLSKTAVS-----------CTSPFNSGVE---------CNDVERPVVVMRNLCS 763
            PQFGDFS+ K+  S             S  +S +E         C    R V V+ +  +
Sbjct: 108  PQFGDFSIKKSHSSSQTNLIKSMNGSVSGDDSSIEVVDTPAVNGCGGGFRKVTVLPSTSA 167

Query: 764  GYEDGVFSGVGVKAKTVLPVGKKAVEVKFRWGVNFPEE---SFDKMRL----KLPFLTVD 922
            G   G+ SGV V A+T LPV  +AV + FRWGV  P E    FD        + PFL ++
Sbjct: 168  GDIAGLLSGVEVAARTSLPVRGRAV-LNFRWGVRVPTEIRRDFDPTAAISLRRFPFLVMN 226

Query: 923  KISIXXXXXXXXXXXXXXXXXXSGIGDGEMLKGMCFWMKKEVEVLQRENNLIKESLEEMK 1102
            KI I                       G++ + +C  + +++E L+ EN  +K ++E+++
Sbjct: 227  KIGIEHVDGSDAKVTKPTSDPGQLTTSGDVAE-VCLAVNRQMEELRTENKQLKRAVEDLR 285

Query: 1103 MXXXXXXXXXXXXXXXDVSRPLGENSSEFEKRKNKKNG---AEEKGRNEVKSKKFSGSDT 1273
                              +   G +S   E  ++  NG   A+        +  + G  +
Sbjct: 286  ------EVISNVRPYSPATIDYGSHSKYREPERSNNNGRSRADRWSSERTTTSDYGGKKS 339

Query: 1274 SSGNDVVEELKRAIMAAS 1327
                DV EELK+A+  A+
Sbjct: 340  KEEGDVAEELKKALKGAA 357


>ref|XP_003611450.1| hypothetical protein MTR_5g014110 [Medicago truncatula]
            gi|355512785|gb|AES94408.1| hypothetical protein
            MTR_5g014110 [Medicago truncatula]
          Length = 567

 Score =  157 bits (398), Expect = 5e-36
 Identities = 131/396 (33%), Positives = 189/396 (47%), Gaps = 46/396 (11%)
 Frame = +2

Query: 290  MKASVKLRKEEAGHENP---LVRFKLPIQILGLPFMSSFTAGDS---KDLSFNLHTNFLN 451
            MK S+K +      + P   ++  K+PI I   P +S+ TA ++    D SF+L TNF  
Sbjct: 1    MKLSLKFQNNNENQQTPQTQIMTAKVPITIFNNPLLSTITATNNYSTSDFSFSLSTNFPT 60

Query: 452  GPSIKLSYTPTQTTTSDIHTHHHQPISLSLKSGVGLFGSPKNSPLIISAHFTHFP----- 616
            GP+ KLSYTPT T++S        P SLSLKSG+GLFGSP +SPL+ SA+F+        
Sbjct: 61   GPTFKLSYTPTTTSSS-------LPFSLSLKSGLGLFGSPNHSPLVFSANFSLSSLSSST 113

Query: 617  --NPTFSLHIKPQFGDFSLSKTAVSCTSPFNSGVECNDVERPVVVMRN-LCSGYED---- 775
               P+FSLH KPQFG FSL KT +S +S  N       +E+  V   N  CSG+++    
Sbjct: 114  PLLPSFSLHFKPQFGHFSLHKTVLSDSSNTNPLSVSPQIEKGFVPETNGSCSGWQNLNLE 173

Query: 776  ----------------------------GVFSGVGVKAKTVLPVGKKAVEVKFRWGVNFP 871
                                        G+   VGV A+TV+PV  + + + FRWGV+FP
Sbjct: 174  PFGHNNNNNVGVGVGVGVGPDGKNNEKCGLSPCVGVMARTVMPV-TQGLLLNFRWGVSFP 232

Query: 872  EESFDKMRLKLPFLTVDKISIXXXXXXXXXXXXXXXXXXSGIGDGEMLKGMCFWMKKEVE 1051
             +S     LK+P+L V+KI +                     G+ ++LK     MK ++E
Sbjct: 233  GKSV----LKMPYLAVNKIGLERVEEMKKDEWNNDDNCE---GNLQVLKE----MKIDLE 281

Query: 1052 VLQRENNLIKESLEEMKMXXXXXXXXXXXXXXXDVSRPLGENSSEFEKRKNKKNGAEEKG 1231
             +++EN  +K  L+EMKM                VS+      S      NK    E + 
Sbjct: 282  NVEKENKEMKRVLDEMKM----------GVSKGKVSKQKHAGESVQSWGSNKNGRKENEK 331

Query: 1232 RNEVKSKKFSGSDTSSGNDVVEELKRAIMAASSSGV 1339
            + E+K +    SD  S      EL++AI AA+  G+
Sbjct: 332  KQEIKPQNIVVSDFES------ELEKAIKAAAMVGI 361


>ref|XP_002527421.1| conserved hypothetical protein [Ricinus communis]
            gi|223533231|gb|EEF34987.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 361

 Score =  157 bits (398), Expect = 5e-36
 Identities = 125/379 (32%), Positives = 185/379 (48%), Gaps = 37/379 (9%)
 Frame = +2

Query: 290  MKASVKLRKEEAGHENPLVRFKLPIQILGLPFMSSFTAGDSKDLSFNLHTNFLNGPSIKL 469
            MKAS+K R+E+     PL R K+P+ ILGLPF S   AG+SK+L+ NL T F +GPSIK+
Sbjct: 1    MKASLKFREEQ----KPLFRAKVPLTILGLPFQSGIVAGESKELTLNLSTFFESGPSIKI 56

Query: 470  SYTPTQTTTSDIHTHHHQPISLSLKSGVGLFGSPKNSPLIISAHFT--HFPNPTFSLHIK 643
            +Y P              P SL +K+G+G FGSP +S L++SA F      NP+F LH K
Sbjct: 57   AYRPNDV---------FNPFSLVVKTGMGAFGSPISSSLLMSAEFNLLSIGNPSFMLHFK 107

Query: 644  PQFGDFSLSKTAVSCTSPFN-------------SGVECND--------VERPVVVMRNLC 760
            P+FGDFS+ K+  S     N               +E  D         E+ + V+    
Sbjct: 108  PKFGDFSIKKSQSSSAFDKNGNWTGSLDNLNDDGSIEVVDSPVLSNGLSEKKIRVLPQPT 167

Query: 761  SGYEDGVFSGVGVKAKTVLPVGKKAVEVKFRWGVNFPEE----SFDKMR----LKLPFLT 916
            +    G FSGV V A T LPV  +A+ + FRWGV  P E    S D M       +PFL 
Sbjct: 168  ASAIVGAFSGVEVTASTKLPVRSRAM-MNFRWGVRVPAEIKSGSSDSMAGINFRNIPFLV 226

Query: 917  VDKISIXXXXXXXXXXXXXXXXXXSGIGD-GEMLKGM-----CFWMKKEVEVLQRENNLI 1078
            ++KI I                    +   G  L+ +     C  +KK++EVLQ EN L+
Sbjct: 227  MNKIGIEHVDSCDDSKSKGKVMTPLNVTKLGSELRNVDMAEACLSVKKQMEVLQAENGLL 286

Query: 1079 KESLEEMKMXXXXXXXXXXXXXXXDVSRPLGENSSEFEKRKNKKNGAEEKGRNEVKSKKF 1258
            K+++++++                 +S P+ + S+    R  ++N  +  G + V+ +  
Sbjct: 287  KKAVDDLRQEISSGR----------LSFPVAD-SNAGRHRDIERNAIKNGGGSRVERR-- 333

Query: 1259 SGSDTSSGNDVVEELKRAI 1315
            S    +  +DV EELK+A+
Sbjct: 334  SNEKKAVESDVNEELKKAL 352


>ref|XP_003535127.1| PREDICTED: uncharacterized protein LOC100796667 [Glycine max]
          Length = 330

 Score =  156 bits (394), Expect = 2e-35
 Identities = 124/371 (33%), Positives = 183/371 (49%), Gaps = 25/371 (6%)
 Frame = +2

Query: 290  MKASVKLRKEEAGHENPLVRFKLPIQILGLPFMSSFTAGDSKDLSFNLHTNFLNGPSIKL 469
            MKAS+K R+E+   + PL+R K+P+ ILG+PF S   AG+SK+L+ NL T F +GPS+K+
Sbjct: 1    MKASLKFREEQ---QKPLLRAKVPLGILGMPFQSGIVAGESKELTLNLSTFFESGPSLKV 57

Query: 470  SYTPTQTTTSDIHTHHHQPISLSLKSGVGLFGSPKNSPLIISAHFTHFP----NPTFSLH 637
            +Y P  +           P S  +K+G G FGSP  S +++S  F + P     P F LH
Sbjct: 58   AYRPNDS---------KNPFSFIVKTGTGPFGSPLKSSMLMSCEF-NLPGTTGTPLFMLH 107

Query: 638  IKPQFGDFSLSKTAVS--------CTSPFNSGVE-CNDVERPVVVMRNLCSGYEDG--VF 784
             KP+FGDF+  KT  S          +  N  VE  N+ E P++    + S  + G  +F
Sbjct: 108  FKPRFGDFTFKKTQSSIFDGKGFGSFNTQNDAVENGNNAETPLMESAKV-SILDSGASMF 166

Query: 785  SGVGVKAKTVLPVGKKAVEVKFRWGVNFPEE-SFDKMRLKLPFLTVDKISIXXXXXXXXX 961
            SG+ V A+T LPV  +A  VKFRWGV  P E   +    K+PFL +DKI +         
Sbjct: 167  SGMEVAARTTLPVRGRAA-VKFRWGVRIPAEFKGNNAFQKIPFLVMDKIGV--------E 217

Query: 962  XXXXXXXXXSGIGD-GEM--------LKGMCFWMKKEVEVLQRENNLIKESLEEMKMXXX 1114
                      G GD GE         +   CF +K+++EVLQ EN L++ ++E+++    
Sbjct: 218  HMMECGDSKKGKGDAGEKPRVPASADVAEACFAVKRQMEVLQAENGLLRNAVEDLRREIV 277

Query: 1115 XXXXXXXXXXXXDVSRPLGENSSEFEKRKNKKNGAEEKGRNEVKSKKFSGSDTSSGNDVV 1294
                             LG+N  + E++     G             F G  T +  +  
Sbjct: 278  GGRSGGSI---------LGKNPKKNERKTTSDYG------------NFPGKSTEA--EAS 314

Query: 1295 EELKRAIMAAS 1327
            EELK+A+M A+
Sbjct: 315  EELKKALMGAA 325


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