BLASTX nr result

ID: Coptis24_contig00010424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010424
         (1825 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16416.3| unnamed protein product [Vitis vinifera]              307   7e-81
emb|CAN80884.1| hypothetical protein VITISV_018653 [Vitis vinifera]   306   9e-81
ref|XP_002277274.1| PREDICTED: transcription factor bHLH130-like...   294   5e-77
emb|CAN62935.1| hypothetical protein VITISV_008845 [Vitis vinifera]   294   5e-77
ref|XP_002314023.1| predicted protein [Populus trichocarpa] gi|2...   289   1e-75

>emb|CBI16416.3| unnamed protein product [Vitis vinifera]
          Length = 297

 Score =  307 bits (786), Expect = 7e-81
 Identities = 172/298 (57%), Positives = 208/298 (69%), Gaps = 11/298 (3%)
 Frame = -3

Query: 1097 MSNHGS---NVAESVYRVASSVGLDQQASPVKMGSGNSSNLVRHSSSPAGLFANINVENG 927
            M +H S      E+ Y   SS+G+DQ +  +K+G GN+SNL+RHSSSPAGLF+++NVENG
Sbjct: 1    MPHHNSAAPGTVENSYSAVSSMGMDQ-SQQIKIGGGNNSNLIRHSSSPAGLFSHLNVENG 59

Query: 926  YAVMRGIGNFRVGNNGNGEAS-PSTSRLKNQINFXXXXXXXXGLMXXXXXXXXXXXXXXS 750
            YA+MRG+GNF  G+  NGE S  S SRLK QINF        GL+              S
Sbjct: 60   YAIMRGMGNFGSGSGTNGEPSFSSASRLKGQINFSSGPPSSSGLVTPISEMGNKSMGTGS 119

Query: 749  AECGSLASGNVSSH-YTPNYSVGSWDDSTL--ENFPNVKRVRDVNPNMLSGLKSSEDQLP 579
             + GS   G+ +S  +   + +GSWDDS +  E+F ++K VRD      SGL +SE Q  
Sbjct: 120  PDNGSFGEGHSNSGGFITGFPIGSWDDSAIMSESFSSLKSVRDDEAKTFSGLNASEAQKG 179

Query: 578  EAGNQTRNLTHHFSLP-KTSAEMAAI---LQFQDSVPCKIRAKRGCATHPRSIAERVRRT 411
            E  N+   L HH SLP KTSA++  I   LQFQDSVPCKIRAKRGCATHPRSIAERVRRT
Sbjct: 180  EPANRPPVLAHHLSLPTKTSADLTTIEKYLQFQDSVPCKIRAKRGCATHPRSIAERVRRT 239

Query: 410  RISERMRKLQELVPNMDKQTNTADMLDLAVEYIKELQKEVKKLNDNRANCTCSSKQNP 237
            RISERMRKLQELVPNMDKQTNT+DMLDLAV+YIK+LQK+VK L+DNRA CTCS+KQ P
Sbjct: 240  RISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQVKTLSDNRAKCTCSNKQKP 297


>emb|CAN80884.1| hypothetical protein VITISV_018653 [Vitis vinifera]
          Length = 446

 Score =  306 bits (785), Expect = 9e-81
 Identities = 196/415 (47%), Positives = 247/415 (59%), Gaps = 51/415 (12%)
 Frame = -3

Query: 1346 YRSAPSSMLANFM--EDDEFLVSHH------------RSSSPEAESMFARFMNCDSSPTE 1209
            YRSAPSS  +NF+  ED E  + H             R SSPE E +F+RFM    +   
Sbjct: 22   YRSAPSSYFSNFIDGEDCEEFLQHRPSSPETERIFSSRPSSPETERIFSRFMASGGTEDS 81

Query: 1208 KS----------------TIIKAEVSNR---SSNHYMGVIDEEETE-------QIMYHTP 1107
             S                +++     N+   S  H   V+ +++ +       Q+MY T 
Sbjct: 82   SSHTVMNMRQNSQAMAPESVVVVSQQNQFMASMKHGAEVLQQQQQQNGYASGSQMMYQTS 141

Query: 1106 PQPMSNHGS---NVAESVYRVASSVGLDQQASPVKMGSGNSSNLVRHSSSPAGLFANINV 936
              PM +H S      E+ Y   SS+G+DQ +   K+G GN+SNL+RHSSSPAGLF+++NV
Sbjct: 142  -SPMPHHNSAAPGTVENSYSAVSSMGMDQ-SQQXKIGGGNNSNLIRHSSSPAGLFSHLNV 199

Query: 935  ENGYAVMRGIGNFRVGNNGNGEAS-PSTSRLKNQINFXXXXXXXXGLMXXXXXXXXXXXX 759
            ENGYA+MRG+GNF  G+  NGE S  S SRLK QINF        GL+            
Sbjct: 200  ENGYAIMRGMGNFGSGSGTNGEPSFSSASRLKGQINFSSGPPSSSGLVTPISEMGNKSMG 259

Query: 758  XXSAECGSLASGNVSSH-YTPNYSVGSWDDSTL--ENFPNVKRVRDVNPNMLSGLKSSED 588
              S + GS   G+ +S  +   + +GSWDDS +  E+F ++K VRD      SGL +SE 
Sbjct: 260  TGSPDNGSFGEGHSNSGGFITGFPIGSWDDSAIMSESFSSLKSVRDDEAKTFSGLNASEA 319

Query: 587  QLPEAGNQTRNLTHHFSLP-KTSAEMAAI---LQFQDSVPCKIRAKRGCATHPRSIAERV 420
            Q  E  N+   L HH SLP KTSA++  I   LQFQDSVPCKIRAKRGCATHPRSIAERV
Sbjct: 320  QKGEPANRPPVLAHHLSLPTKTSADLTTIEKYLQFQDSVPCKIRAKRGCATHPRSIAERV 379

Query: 419  RRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKELQKEVKKLNDNRANCTC 255
            RRTRISERMRKLQELVPNMDKQTNT+DMLDLAV+YIK+LQK+VK+ N  +A   C
Sbjct: 380  RRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQVKR-NRKKAAIKC 433


>ref|XP_002277274.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
          Length = 405

 Score =  294 bits (753), Expect = 5e-77
 Identities = 178/378 (47%), Positives = 227/378 (60%), Gaps = 8/378 (2%)
 Frame = -3

Query: 1346 YRSAPSSMLANFMEDDEFLVSHHRSSSPEAESMFARFMNCDSSPTEKSTIIKAEVSNRSS 1167
            +RSAPSS+LANF +  + +   H+ ++   +    RFM C                    
Sbjct: 59   FRSAPSSLLANFTDSGDGV---HKGANLCDDFESERFMPCGGF----------------- 98

Query: 1166 NHYMGVIDEEETEQIMYHTPPQ---PMSNHGSNVAESVYRVASSVGLDQQASPVKMGSGN 996
                    ++         PPQ     S+  S+  +  Y V +S  ++ +          
Sbjct: 99   --------QDSAMSCQSQLPPQYPRQSSSTSSSAMDGSYGVVNSNNMEAK---------Q 141

Query: 995  SSNLVRHSSSPAGLFANINVENGYAVMRGIGNFRVGNNGNGEASPSTSRLKNQINFXXXX 816
             S+LVR SSSPAGLF++++ +NGYA+MRG+GNFR GN GNGE SPSTSRLK Q++F    
Sbjct: 142  GSSLVRQSSSPAGLFSHLSGQNGYAIMRGVGNFRPGNVGNGEISPSTSRLKPQVSFSSGL 201

Query: 815  XXXXGLMXXXXXXXXXXXXXXSAECGSLASGNVSSH-YTPNYSVGSWDDST-LENFPNVK 642
                GL+              S     LA+ N  +  Y+P +  GSW+DS   ENF  +K
Sbjct: 202  PSSLGLLPQISEIGSECIQASSPNDRKLANSNGDARFYSPGFPYGSWNDSAHFENFSGMK 261

Query: 641  RVRDVNPNMLSGLKSSEDQLPEAGNQTRNLTHHFSLPKTSAEMAAI---LQFQDSVPCKI 471
            R +D +  + SG  +S  +  E G++++ L+HH SLPKTSAEMAA+   LQFQDSVPCKI
Sbjct: 262  RDQDNDGKLYSGSNTSGIRNEEFGHRSQILSHHLSLPKTSAEMAAMEKFLQFQDSVPCKI 321

Query: 470  RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKELQKEV 291
            RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIK+LQK+ 
Sbjct: 322  RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQY 381

Query: 290  KKLNDNRANCTCSSKQNP 237
              L DNRA+C C  KQ P
Sbjct: 382  NTLTDNRAHCKCLGKQKP 399


>emb|CAN62935.1| hypothetical protein VITISV_008845 [Vitis vinifera]
          Length = 394

 Score =  294 bits (753), Expect = 5e-77
 Identities = 178/378 (47%), Positives = 227/378 (60%), Gaps = 8/378 (2%)
 Frame = -3

Query: 1346 YRSAPSSMLANFMEDDEFLVSHHRSSSPEAESMFARFMNCDSSPTEKSTIIKAEVSNRSS 1167
            +RSAPSS+LANF +  + +   H+ ++   +    RFM C                    
Sbjct: 48   FRSAPSSLLANFTDSGDGV---HKGANLCDDFESERFMPCGGF----------------- 87

Query: 1166 NHYMGVIDEEETEQIMYHTPPQ---PMSNHGSNVAESVYRVASSVGLDQQASPVKMGSGN 996
                    ++         PPQ     S+  S+  +  Y V +S  ++ +          
Sbjct: 88   --------QDSAMSCQSQLPPQYPRQSSSTSSSAMDGSYGVVNSNNMEAK---------Q 130

Query: 995  SSNLVRHSSSPAGLFANINVENGYAVMRGIGNFRVGNNGNGEASPSTSRLKNQINFXXXX 816
             S+LVR SSSPAGLF++++ +NGYA+MRG+GNFR GN GNGE SPSTSRLK Q++F    
Sbjct: 131  GSSLVRQSSSPAGLFSHLSGQNGYAIMRGVGNFRPGNVGNGEISPSTSRLKPQVSFSSGL 190

Query: 815  XXXXGLMXXXXXXXXXXXXXXSAECGSLASGNVSSH-YTPNYSVGSWDDST-LENFPNVK 642
                GL+              S     LA+ N  +  Y+P +  GSW+DS   ENF  +K
Sbjct: 191  PSSLGLLPQISEIGSECIQASSPNDRKLANSNGDARFYSPGFPYGSWNDSAHFENFSGMK 250

Query: 641  RVRDVNPNMLSGLKSSEDQLPEAGNQTRNLTHHFSLPKTSAEMAAI---LQFQDSVPCKI 471
            R +D +  + SG  +S  +  E G++++ L+HH SLPKTSAEMAA+   LQFQDSVPCKI
Sbjct: 251  RDQDNDGKLYSGSNTSGIRNEEFGHRSQILSHHLSLPKTSAEMAAMEKFLQFQDSVPCKI 310

Query: 470  RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKELQKEV 291
            RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIK+LQK+ 
Sbjct: 311  RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQY 370

Query: 290  KKLNDNRANCTCSSKQNP 237
              L DNRA+C C  KQ P
Sbjct: 371  NTLTDNRAHCKCLGKQKP 388


>ref|XP_002314023.1| predicted protein [Populus trichocarpa] gi|222850431|gb|EEE87978.1|
            predicted protein [Populus trichocarpa]
          Length = 421

 Score =  289 bits (740), Expect = 1e-75
 Identities = 180/390 (46%), Positives = 230/390 (58%), Gaps = 16/390 (4%)
 Frame = -3

Query: 1346 YRSAPSSMLANFME-----DDEFLVS----HHRSSSPEAESMFARFMNCDSSPTEKSTII 1194
            YRSAPSS+L + +      D   + S    + RSSSPE ++M ARFM+  +   + S+  
Sbjct: 46   YRSAPSSILESLVNGTSGHDGGGIESGDYRYLRSSSPEMDTMLARFMSSCNGSGDSSSQN 105

Query: 1193 KAEVSNRSSNHYMGVIDEEETEQIMYHTPPQPMSNHGSNVAESVYRVASSVGLDQQASPV 1014
              E   R +    G   E   + +  H      S    N  +S + V SS+ L+      
Sbjct: 106  LQEFGERPAIKQEGGDSEMVYQSLPGHNLVTDNSVSVGNSMDSAFNVMSSMALENSMQAT 165

Query: 1013 KMGSGNSSNLVRHSSSPAGLFANINVENGYAVMRGIGNFRVGNNGNGEASPSTSRLKNQI 834
            KM + N SNL R +SSPAGLF+++ V+NG+ VMR  G+FR GN  NGEASP T++L+  +
Sbjct: 166  KMSTANGSNLARQNSSPAGLFSDLGVDNGFVVMREGGSFRAGNGTNGEASP-TNKLRRHV 224

Query: 833  NFXXXXXXXXGLMXXXXXXXXXXXXXXSAEC--GSLASGNVS-SHYTPNYSVGSWDDSTL 663
            NF         +                 EC  G    G+VS + Y   ++  SWD ++L
Sbjct: 225  NFSSGQRMLPQIAEIGE------------ECIGGRSPEGDVSEARYMSRFTSDSWDGASL 272

Query: 662  ENFPNVKRVRDVNPNMLSGLKSSEDQLPEAGNQTRNLTHHFSLPKTSAEMAAILQFQD-- 489
                 +KR RD + NM SGL + ++Q   +GN+   LTHH SLPKT +E A I +F D  
Sbjct: 273  SG---LKRQRDNDGNMFSGLNTLDNQDGNSGNRVTGLTHHLSLPKTLSETATIEKFLDFQ 329

Query: 488  --SVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEY 315
              SVPCKIRAKRG ATHPRSIAERVRRTRISERMRKLQEL PNMDKQTNTADMLDLAVE+
Sbjct: 330  GNSVPCKIRAKRGFATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEH 389

Query: 314  IKELQKEVKKLNDNRANCTCSSKQNPY*IP 225
            IK+LQK+VK L D +A CTCSSKQ  Y  P
Sbjct: 390  IKDLQKQVKTLTDTKAKCTCSSKQKHYSSP 419


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